prot_C-linearis_contig101.727.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.727.1
Unique Nameprot_C-linearis_contig101.727.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length112
Homology
BLAST of mRNA_C-linearis_contig101.727.1 vs. uniprot
Match: D8LN84_ECTSI (Ribosomal protein rpl30 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN84_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 1.510e-71
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQGAEA 111
            MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQGAEA
Sbjct:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQGAEA 111          
BLAST of mRNA_C-linearis_contig101.727.1 vs. uniprot
Match: A0A835YXX2_9STRA (Ribosomal protein rpl30 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX2_9STRA)

HSP 1 Score: 181 bits (458), Expect = 4.660e-57
Identity = 87/106 (82.08%), Postives = 100/106 (94.34%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILR 106
            MAP KK+KK IES+N RLQLVM+SGKASLGYK T+K MR+++AKM++ISNNCPPLRKSEIEY+A+LAKC VHHY+GSNTDLGTACGKYFRVSVL+ITDAGDSDILR
Sbjct:    1 MAPIKKAKKTIESINTRLQLVMRSGKASLGYKQTLKCMRTSKAKMIIISNNCPPLRKSEIEYYALLAKCNVHHYSGSNTDLGTACGKYFRVSVLAITDAGDSDILR 106          
BLAST of mRNA_C-linearis_contig101.727.1 vs. uniprot
Match: A0A812PA55_SYMMI (RPL30 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PA55_SYMMI)

HSP 1 Score: 173 bits (439), Expect = 3.790e-54
Identity = 82/108 (75.93%), Postives = 102/108 (94.44%), Query Frame = 0
Query:    1 MAP--GKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILR 106
            MAP  GKK+KK +ES+N+RLQLVM+SGKASLGYK+TIK++R+T+AK+V+IS+NCPPLRKSEIEY+AMLAKC VHHY G+N+DLGTACGK++RVS+LS+TD GDSDILR
Sbjct:    1 MAPAAGKKTKKTVESINSRLQLVMRSGKASLGYKTTIKTLRNTKAKLVIISSNCPPLRKSEIEYYAMLAKCTVHHYAGTNSDLGTACGKFYRVSMLSVTDGGDSDILR 108          
BLAST of mRNA_C-linearis_contig101.727.1 vs. uniprot
Match: A0A7S3HF33_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HF33_9STRA)

HSP 1 Score: 166 bits (419), Expect = 4.510e-51
Identity = 76/104 (73.08%), Postives = 99/104 (95.19%), Query Frame = 0
Query:    4 GKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQ 107
            GKK+KKA+ES+N+++QLVMKSGK +LGYK+TIK++R+ +AKMVLI++N PPLRKSE+EY+AMLAKC VHHY G+N++LGTACGK++RVS++SITDAGDSDILRQ
Sbjct:    9 GKKTKKAVESINSKVQLVMKSGKTALGYKTTIKALRANKAKMVLIASNTPPLRKSEVEYYAMLAKCVVHHYAGNNSELGTACGKFYRVSMVSITDAGDSDILRQ 112          
BLAST of mRNA_C-linearis_contig101.727.1 vs. uniprot
Match: A0A261XVZ6_9FUNG (60S ribosomal protein L30-1 n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XVZ6_9FUNG)

HSP 1 Score: 165 bits (417), Expect = 7.790e-51
Identity = 80/105 (76.19%), Postives = 96/105 (91.43%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDIL 105
            MAP KKSKK++ES+N+RLQLVMKSGK +LGYKST+KS+R+ +AK++LI+ NCPPLRKSEIEY+AML+K  VHHYTG+N +LGTACGK FR SVLSITDAGDSDIL
Sbjct:    1 MAPVKKSKKSVESINSRLQLVMKSGKYNLGYKSTLKSVRAGKAKLILIAGNCPPLRKSEIEYYAMLSKTGVHHYTGNNIELGTACGKLFRCSVLSITDAGDSDIL 105          
BLAST of mRNA_C-linearis_contig101.727.1 vs. uniprot
Match: A0A1Y1Z8Q1_9FUNG (60S ribosomal protein n=4 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z8Q1_9FUNG)

HSP 1 Score: 164 bits (416), Expect = 1.180e-50
Identity = 77/106 (72.64%), Postives = 98/106 (92.45%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILR 106
            MAP KKSKK++ES+N+RL LVMKSGK++LGYKST+KS+R+ +AK++++S NCPPLRKSEIEY+AML+K +VHHY G+N +LGTACGKYFRV VL+ITDAGDSDIL+
Sbjct:    1 MAPIKKSKKSVESINSRLALVMKSGKSNLGYKSTLKSIRNGKAKLIILSGNCPPLRKSEIEYYAMLSKTSVHHYNGNNIELGTACGKYFRVGVLAITDAGDSDILK 106          
BLAST of mRNA_C-linearis_contig101.727.1 vs. uniprot
Match: A0A7S2USR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USR9_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.990e-50
Identity = 81/113 (71.68%), Postives = 99/113 (87.61%), Query Frame = 0
Query:    1 MAPGKK--SKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQGAEA 111
            MAP KK  SKK +E+MN++LQLVMKSGKASLGYKS+IK++R+ +AK+VL+S NCPPLR+SEIEY+AMLAK  VHHY G+NTDLGTACGKYFRV VL +T+AGDS+ILR   E+
Sbjct:   38 MAPSKKVSSKKTVENMNSQLQLVMKSGKASLGYKSSIKALRNNKAKLVLVSKNCPPLRRSEIEYYAMLAKVGVHHYAGNNTDLGTACGKYFRVGVLCVTNAGDSEILRSIPES 150          
BLAST of mRNA_C-linearis_contig101.727.1 vs. uniprot
Match: A0A7S1BKT7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKT7_9STRA)

HSP 1 Score: 162 bits (411), Expect = 6.600e-50
Identity = 78/110 (70.91%), Postives = 100/110 (90.91%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQGAE 110
            MAP KK+KK  ESMN+RL+LVMKSGKA+LGYK+TI+S+RS++AK++L+++NCPPLRKSE+EY+AMLAK  VHHY+G+NT+LGTACGK+F  SVL++ DAGDSDIL  GAE
Sbjct:    1 MAP-KKAKKTTESMNSRLKLVMKSGKATLGYKATIRSLRSSKAKLILVASNCPPLRKSELEYYAMLAKTHVHHYSGNNTELGTACGKFFNCSVLTVLDAGDSDILTVGAE 109          
BLAST of mRNA_C-linearis_contig101.727.1 vs. uniprot
Match: A0A7S2AKD1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKD1_9STRA)

HSP 1 Score: 163 bits (413), Expect = 6.950e-50
Identity = 78/105 (74.29%), Postives = 95/105 (90.48%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDIL 105
            MAPGKKSK+A+ES+N+RLQLVMKSGKA LGYKST+KS+RS + KMV++SNN PPL+KSEIEY++MLAK  V HY+G+N+DLGTACGKYFRV  +SI DAGDSDI+
Sbjct:   23 MAPGKKSKRAVESINSRLQLVMKSGKAELGYKSTLKSLRSGKCKMVILSNNTPPLKKSEIEYYSMLAKVTVTHYSGTNSDLGTACGKYFRVGTVSIIDAGDSDII 127          
BLAST of mRNA_C-linearis_contig101.727.1 vs. uniprot
Match: L8GX53_ACACA (60S ribosomal protein, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GX53_ACACA)

HSP 1 Score: 162 bits (411), Expect = 7.020e-50
Identity = 80/107 (74.77%), Postives = 92/107 (85.98%), Query Frame = 0
Query:    1 MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISNNCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAGDSDILRQ 107
            M   KK KKA ES+N+RL LVMKSGK +LGYKST+KS+R  +AK+++IS NCPPLRKSEIEY+AMLAK  VHHYTG+N DLGTACGKYFRVS LSITD GDSDI+RQ
Sbjct:    1 MVSTKKQKKAQESINSRLALVMKSGKYTLGYKSTLKSLRQGKAKLIIISTNCPPLRKSEIEYYAMLAKTGVHHYTGNNIDLGTACGKYFRVSSLSITDPGDSDIIRQ 107          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN84_ECTSI1.510e-71100.00Ribosomal protein rpl30 n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YXX2_9STRA4.660e-5782.08Ribosomal protein rpl30 n=1 Tax=Tribonema minus Ta... [more]
A0A812PA55_SYMMI3.790e-5475.93RPL30 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S3HF33_9STRA4.510e-5173.08Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A261XVZ6_9FUNG7.790e-5176.1960S ribosomal protein L30-1 n=1 Tax=Bifiguratus ad... [more]
A0A1Y1Z8Q1_9FUNG1.180e-5072.6460S ribosomal protein n=4 Tax=Basidiobolus meristo... [more]
A0A7S2USR9_9STRA1.990e-5071.68Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1BKT7_9STRA6.600e-5070.91Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2AKD1_9STRA6.950e-5074.29Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
L8GX53_ACACA7.020e-5074.7760S ribosomal protein, putative n=1 Tax=Acanthamoe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 13..105
e-value: 2.5E-22
score: 78.4
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 5..107
e-value: 2.5E-48
score: 163.8
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 13..106
NoneNo IPR availablePANTHERPTHR11449:SF1360S RIBOSOMAL PROTEIN L30-1-RELATEDcoord: 1..107
IPR039109Ribosomal protein L30/YlxQPANTHERPTHR11449RIBOSOMAL PROTEIN L30coord: 1..107
IPR022991Ribosomal protein L30e, conserved sitePROSITEPS00993RIBOSOMAL_L30E_2coord: 80..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:173923..175757 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.727.1mRNA_C-linearis_contig101.727.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 173923..176503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.727.1 ID=prot_C-linearis_contig101.727.1|Name=mRNA_C-linearis_contig101.727.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=112bp
MAPGKKSKKAIESMNARLQLVMKSGKASLGYKSTIKSMRSTRAKMVLISN
NCPPLRKSEIEYFAMLAKCAVHHYTGSNTDLGTACGKYFRVSVLSITDAG
DSDILRQGAEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004038Ribosomal_L7Ae/L30e/S12e/Gad45
IPR029064L30e-like
IPR039109L30/L30e/YlxQ
IPR022991Ribosomal_L30e_CS