prot_C-linearis_contig101.720.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.720.1
Unique Nameprot_C-linearis_contig101.720.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length274
Homology
BLAST of mRNA_C-linearis_contig101.720.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI)

HSP 1 Score: 332 bits (852), Expect = 8.430e-109
Identity = 189/273 (69.23%), Postives = 213/273 (78.02%), Query Frame = 0
Query:    1 MNTRKIKINFQGTAGDVDLLSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKETA-AKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAP--KENVLHKAFIAAGIQLRPREVRPLLLALDVRP 270
            M T  IKINFQGT+ DV++  P TLA LQ AIA  F  E+P RS A EAAKD+DLSFTYKDP+GDDIVFDKDSEL+LA+RLCP SLEI+AA KE   A KPDPE RLY +AARNLREYNGVPSMTP KL+KTLAFL+LNP+RLVKQ LAPK LL RM A   N  +    PLG  K NNEDL+ESVAAGMELMSVEDDKKEWNDGFVSVEPA  +        +DN    ++K+D  AP  K+N++HKAFIA GIQLRPREVRPLL+ALDVRP
Sbjct:    1 MTTSSIKINFQGTSRDVNVPVPVTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGK-NNEDLAESVAAGMELMSVEDDKKEWNDGFVSVEPADTSSPG-----NDN----EEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRP 263          
BLAST of mRNA_C-linearis_contig101.720.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI)

HSP 1 Score: 325 bits (834), Expect = 6.470e-107
Identity = 185/273 (67.77%), Postives = 212/273 (77.66%), Query Frame = 0
Query:    1 MNTRKIKINFQGTAGDVDLLSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKET-AAKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAP--KENVLHKAFIAAGIQLRPREVRPLLLALDVRP 270
            M T  IKINFQG + DV++ +P TLA LQ  IA+ F  E+P RS   EAAKD+DLSFTYKDP+GDDIVFDKDSEL LA+RLCP SLEI+AA KE  AA+ PD E RLY +AARNLREYNGVPSMTP KL+KTLAFL+LNP+RLVKQ LAPK LL RM A   N  +    PLG  K NNEDL+ESVAAGMELMS+EDDKKEWNDGFVSVEPA  +       D+DN    ++K+D  AP  K+N++HKAFIA GIQLRPREVRPLL+ALDVRP
Sbjct:   17 MTTSSIKINFQGASRDVNVPAPVTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKVPLGDGK-NNEDLAESVAAGMELMSLEDDKKEWNDGFVSVEPADTSSP-----DNDN----EEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRP 279          
BLAST of mRNA_C-linearis_contig101.720.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE)

HSP 1 Score: 325 bits (834), Expect = 6.410e-106
Identity = 185/274 (67.52%), Postives = 210/274 (76.64%), Query Frame = 0
Query:    1 MNTRKIKINFQGTAGDVDLLSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKETA-AKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEP---APAAPTTAEVVDSDNAAAAKDKDDNTAPKENVLHKAFIAAGIQLRPREVRPLLLALDVRP 270
            M T  IKINFQG + DV++ +P +LA LQ AIA+ F  E+P RS A EAAKD+DLSFTYKDP+GDDIVFDKDSEL LA+RLCPSSLEI+A  KE+  AKKPDPE RLY +AARNLREYNGVPSMT  KLIKTLAFL+LNP+RLVKQ LAPK LL RM A   N  +    PLG  K NNEDL+ESVAAGMELMSVEDDKKEWNDGFVS E    A A P TA+    DN    ++ D     K++++HKAFI  GIQLRPREVRPLL+ALDVRP
Sbjct:   19 MTTPSIKINFQGASRDVNVPAPVSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGK-NNEDLAESVAAGMELMSVEDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETKKDLIHKAFITGGIQLRPREVRPLLVALDVRP 291          
BLAST of mRNA_C-linearis_contig101.720.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 5.440e-104
Identity = 184/273 (67.40%), Postives = 208/273 (76.19%), Query Frame = 0
Query:    1 MNTRKIKINFQGTAGDVDLLSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKET-AAKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAP--KENVLHKAFIAAGIQLRPREVRPLLLALDVRP 270
            M T  IKINFQG + DV + +P TLA LQ AIA+ F  E+P RS   EAAKD+DLSFTYKDP+GDDIVFDKDSEL+LALRLCP SLEI+AA KE  A K PD E  LY +AARNLREYNGVPSMTP KL+KTLAFL+LNP+RLVKQ LAPK LL RM A   N  +     LG  K NNEDL+E VAAGME MSVEDDKKEWNDGFVSVEPA       E   SDN    ++++D+ AP  K+N++HKAFIA GIQLRPREVRPLL+ALDVRP
Sbjct:   28 MTTSSIKINFQGASRDVSVPAPATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVRLGDGK-NNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSVEPA-------ETSSSDNGN--EEENDDAAPEVKQNLIHKAFIAGGIQLRPREVRPLLVALDVRP 290          
BLAST of mRNA_C-linearis_contig101.720.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 1.960e-102
Identity = 184/276 (66.67%), Postives = 212/276 (76.81%), Query Frame = 0
Query:    1 MNTRKIKINFQGTAGDVDLLSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKETAA-KKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEP---APAAPTTAEVVDSDNAAAAKDKDDNTAP--KENVLHKAFIAAGIQLRPREVRPLLLALDVRP 270
            M T  IKINFQGT+ +V++ +PFTLA LQ  IA+ F  E+P RS A EA KD+DLSFTYKDP+GDDIVFDKDSEL+LA+RLCP SLEI+AA KE     KPDPE RLY +AARNLREYNGVPSMT  KLIKTLAFL+LNPRRLVKQ LAPK LL RM A   N  +     LG D  NNEDL+ESVAAGMELMSVEDDKKE N+GFVS +P   A A P TA+    DN    ++++D+ AP  K+N++H AFIA GIQLRPREVRPLL+ALDVRP
Sbjct:    1 MTTSSIKINFQGTSRNVNVQAPFTLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTLG-DGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDN--EEENDDAAPEVKKNLIHTAFIAGGIQLRPREVRPLLVALDVRP 273          
BLAST of mRNA_C-linearis_contig101.720.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 2.210e-102
Identity = 183/274 (66.79%), Postives = 210/274 (76.64%), Query Frame = 0
Query:    1 MNTRKIKINFQGTAGDVDLLSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKETA-AKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVE---PAPAAPTTAEVVDSDNAAAAKDKDDNTAP--KENVLHKAFIAAGIQLRPREVRPLLLALDV 268
            M T  IKINFQG + DV++ +P TL  LQ AIA+ F  E+P RS A EAAKD+DLSFTYKDP+GDDIVFDKDSEL LA+RLCPSSLEI+AA KE+  A KPDPE RLY +AARNLREYNGVPSMTP KLIKTLAFL+LNP+RLVKQ LAPK LL RM A   N  +    PLG  K NNEDL++SVAAGMELMSVED KKEWNDGFVS E   PA AAP TAE    DN    ++++D+ AP  K+N++HKAFIA GIQLRPRE   LLL + +
Sbjct:   16 MTTSSIKINFQGASRDVNVPAPVTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGK-NNEDLADSVAAGMELMSVED-KKEWNDGFVSAESDAPAAAAPITAETSSPDNDK--EEENDDAAPEVKKNLIHKAFIAGGIQLRPRE--GLLLGVSI 283          
BLAST of mRNA_C-linearis_contig101.720.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 2.140e-101
Identity = 181/273 (66.30%), Postives = 207/273 (75.82%), Query Frame = 0
Query:    1 MNTRKIKINFQGTAGDVDLLSPFTLAGLQQAIASTFGTEMPARSGADEAAKDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKET-AAKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAP--KENVLHKAFIAAGIQLRPREVRPLLLALDVRP 270
            M T  IKI FQG + DV++  P  LA LQ AIA+ F  E+PARS A EAA D+DLSFTYKDP+GDDIVFDK+SEL LALRLCP SLEI+AA KE  A + PD E +LY +AARNLREYNGVPSMTP KL+KTLAFL+LNP+RLVKQ LAPK LL RM A   N  +    PLG  K NNEDL+ESVAAGMELMSVED KKEWNDGFVSVEPA  +        +DN    ++K+D  AP  K+N++HKAFIA GIQLRPREVRPLL+ALDV P
Sbjct:   19 MTTSSIKITFQGASRDVNVRVPVMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGK-NNEDLAESVAAGMELMSVEDGKKEWNDGFVSVEPAEISFPA-----NDN----EEKND-AAPEAKKNLIHKAFIAGGIQLRPREVRPLLVALDVLP 280          
BLAST of mRNA_C-linearis_contig101.720.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 6.400e-12
Identity = 61/171 (35.67%), Postives = 77/171 (45.03%), Query Frame = 0
Query:   93 KETAAKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAPKENVLHKAFIAAGIQLRPREVRPLL 263
            K +  +  +P   LY  AARNL EY+GVPSMT   L KT+  LQL P RLV Q LAPK LL   +AA     +A                E      +   V DD    +     +E              D+ A     D  T   ++ +H  F+AAG+QLRPRE RPLL
Sbjct:   38 KPSCKRAVEPNPLLYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEGKSAA----GDAXXXXXXXXXXXXXXXXEVDPEQADNNQVSDDSNTNSRDGTDIE-------------HDHVATQDSIDIETGASKHPIHAVFVAAGVQLRPRETRPLL 191          
BLAST of mRNA_C-linearis_contig101.720.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 5.550e-9
Identity = 57/171 (33.33%), Postives = 79/171 (46.20%), Query Frame = 0
Query:   93 KETAAKKPDPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKEWNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAPKENVLHKAFIAAGIQLRPREVRPLL 263
            K +  +  +P   ++  AARNLREY+GVPS+TP  L  T+  L+L P RLV Q LAPK LL   + A  + D       GG ++  E  +   +  +   S  D     ND  V+                  A A+K          + +   F+A G+QLRPRE RPLL
Sbjct:   28 KPSCKRTGEPNPLMFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLKGNSTAGVDADSTDGS--GGFEAEEEQANNQFSHDLSSNS-SDGGDTGNDNIVTQNSI-----------GFEARASK----------HPIQAVFVAVGVQLRPRETRPLL 174          
BLAST of mRNA_C-linearis_contig101.720.1 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 6.880e-7
Identity = 31/47 (65.96%), Postives = 34/47 (72.34%), Query Frame = 0
Query:  106 LYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPKAL 152
            LY  AARNLREY+GVPSMT   L KT+  LQL P RLV Q LAPK +
Sbjct:   53 LYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXI 99          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LN68_ECTSI8.430e-10969.23PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN66_ECTSI6.470e-10767.77PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQ17_9PHAE6.410e-10667.52PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KAY7_9PHAE5.440e-10467.40PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KB69_9PHAE1.960e-10266.67PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN82_ECTSI2.210e-10266.79PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPU3_9PHAE2.140e-10166.30PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K3J2_9PHAE6.400e-1235.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCG1_9PHAE5.550e-933.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI70_9PHAE6.880e-765.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 2..90
e-value: 8.7E-6
score: 27.3
NoneNo IPR availableSUPERFAMILY54277CAD & PB1 domainscoord: 5..83
IPR000270PB1 domainPROSITEPS51745PB1coord: 3..93
score: 12.731

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:111868..113551 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.720.1mRNA_C-linearis_contig101.720.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 111826..124188 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.720.1 ID=prot_C-linearis_contig101.720.1|Name=mRNA_C-linearis_contig101.720.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=274bp
MNTRKIKINFQGTAGDVDLLSPFTLAGLQQAIASTFGTEMPARSGADEAA
KDSDLSFTYKDPEGDDIVFDKDSELSLALRLCPSSLEITAAAKETAAKKP
DPEHRLYTVAARNLREYNGVPSMTPKKLIKTLAFLQLNPRRLVKQSLAPK
ALLIRMAAAKKNEDEAQPQPLGGDKSNNEDLSESVAAGMELMSVEDDKKE
WNDGFVSVEPAPAAPTTAEVVDSDNAAAAKDKDDNTAPKENVLHKAFIAA
GIQLRPREVRPLLLALDVRPAAW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom