prot_C-linearis_contig101.716.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig101.716.1
Unique Nameprot_C-linearis_contig101.716.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length215
Homology
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BLAST of mRNA_C-linearis_contig101.716.1 vs. uniprot
Match: D8LN78_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN78_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 9.240e-26
Identity = 64/99 (64.65%), Postives = 77/99 (77.78%), Query Frame = 0 
Query:   11 VVIVLGECADYRQVMTYVVSKGLKSAERAWLVLLAARDPACHVSASTCGSDDGRDALALSALSGTLSIDWAPVVPVAARANVAAIVEAAAVLDRENFAA 109
            VVIVLGECADYRQVMT+   +GLKS ERAWL+L AARDP CH SA+ CG DDGRDALALS++SG LSIDWA ++P + R +V A ++ A  L RE  A+
Sbjct:  243 VVIVLGECADYRQVMTFAAMRGLKS-ERAWLLLSAARDPTCHASAAACGRDDGRDALALSSMSGALSIDWA-LMPTS-RTSVEACMDPAVALGREGLAS 338
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BLAST of mRNA_C-linearis_contig101.716.1 vs. uniprot
Match: A0A6H5JK37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK37_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 3.170e-25
Identity = 64/99 (64.65%), Postives = 77/99 (77.78%), Query Frame = 0 
Query:   11 VVIVLGECADYRQVMTYVVSKGLKSAERAWLVLLAARDPACHVSASTCGSDDGRDALALSALSGTLSIDWAPVVPVAARANVAAIVEAAAVLDRENFAA 109
            VVIVLGECADYRQVMT+   +GLKS ERAWL+L AARDP CH SA+ CG DDGRDALALS++SG LSIDWA ++P + R +  A V+ A  L RE+ A+
Sbjct:  221 VVIVLGECADYRQVMTFAAMRGLKS-ERAWLLLSAARDPTCHASAAACGRDDGRDALALSSMSGALSIDWA-LMPTS-RTSAEAYVDPAVALGRESPAS 316
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LN78_ECTSI9.240e-2664.65Tyrosine kinase specific for activated (GTP-bound)... [more]
A0A6H5JK37_9PHAE3.170e-2564.65Protein kinase domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:98431..100010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.716.1mRNA_C-linearis_contig101.716.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig101 98431..100010 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig101.716.1 ID=prot_C-linearis_contig101.716.1|Name=mRNA_C-linearis_contig101.716.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=215bp
GSGSGSGSGSVVIVLGECADYRQVMTYVVSKGLKSAERAWLVLLAARDPA
CHVSASTCGSDDGRDALALSALSGTLSIDWAPVVPVAARANVAAIVEAAA
VLDRENFAAAFFPPPAGEAVAESKASSVFFSGGWSEQQQQQQQQLLRSSS
SDAGDERRSCGGGGGGGGGVCPAAKEYRAVPLDVPGGVFRAAALIFDAVE
LGGRVLAAAAGDGDG
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