prot_C-linearis_contig100.700.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig100.700.1
Unique Nameprot_C-linearis_contig100.700.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length394
Homology
BLAST of mRNA_C-linearis_contig100.700.1 vs. uniprot
Match: D7FRV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 4.640e-71
Identity = 117/259 (45.17%), Postives = 159/259 (61.39%), Query Frame = 0
Query:  136 FQQEGCPYSISEQEAADIFNSTSEPGNVISVEKFGVGRTGNRFESLSLVLSMGYCCRSRLVYLPQEDDVLP-TESGDVFQAGQRLFSFIHATLPSDGYTQLRDDPDACSPTLELSPDDAFYLSGYPQTLLDCMNEVYVRGCERAFLGPGLDKDNICPKQDPATQTGVGNLVVHIRSGDIMTYRGGADHYGDNPADN---RGPFGQPPLQYYLNAISEKKWDTITVLTWAWEDALLNPTYTVIEMMAKTRILGENIRLFK 390
            FQ  GCP ++S  +A    +  +   N I++  FG GR+GN F  +S  L+MG+CCRSRL+ LP+ D  +P  + G  F+AG+R F F   T P  G+ QL D+P+ C P +E   D+AF        LL CMN VY+RGCE+A+LG  +D +  CPKQ+P  + G G+LVVHIRSGDI            NP +    R  FGQPPLQYYL+ + EK WD +T LT AW    +NPT++++E+MAK   LG+N+RL K
Sbjct:   84 FQSAGCPQALSRSQAEAALDGGNSTSNTITLLSFGSGRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAMPGDDEGGGFKAGERWFDFSRVTPPWPGFEQLGDNPEVCRPQMEDGADNAFGYEHIHSRLLRCMNRVYLRGCEKAYLGKMVDLEGFCPKQEPGKRKGAGSLVVHIRSGDIF-----------NPNEEGRRRTEFGQPPLQYYLHVLGEKDWDNVTFLTAAWNQKAINPTFSILEVMAKAGTLGDNVRLLK 331          
BLAST of mRNA_C-linearis_contig100.700.1 vs. uniprot
Match: D7FRV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV8_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 4.430e-55
Identity = 96/203 (47.29%), Postives = 122/203 (60.10%), Query Frame = 0
Query:  187 MGYCCRSRLVYLPQEDDVLPTESGDVFQAGQRLFSFIHATLPSDGYTQLRDDPDACSPTLELSPDDAFYLSGYPQTLLDCMNEVYVRGCERAFLGPGLDKDNICPKQDPATQTGVGNLVVHIRSGDIMTYRGGADHYGDNPADNRGPFGQPPLQYYLNAISEKKWDTITVLTWAWEDALLNPTYTVIEMMAKTRILGENIRLF 389
            MG+CCRSRL+ LP  DD LP E  D F + +R F F + T+P   Y ++ DD + C P  +     AF        LL+CMN VY+RGCE+A+LG  +D  + CPKQ+P  + G G+LV HIRSGDI           D     R  FGQPPLQYYL  ++ K WD +T LT AWED  LNPT+  +EMMA   +LGEN+ LF
Sbjct:    1 MGFCCRSRLLTLPATDDKLPDEL-DNFTSARRWFDFSNVTVPWPEYQEMGDDQEVCRPETKDGGRKAFGYEDVHPKLLECMNRVYLRGCEKAYLGKLVDVGSFCPKQEPGKRKGAGSLVAHIRSGDIFN--------PDGEGHRRQGFGQPPLQYYLRVLAAKDWDNVTFLTAAWEDRALNPTFLTLEMMADAGVLGENVHLF 194          
BLAST of mRNA_C-linearis_contig100.700.1 vs. uniprot
Match: A0A6H5L0Z0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z0_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 3.770e-35
Identity = 97/293 (33.11%), Postives = 142/293 (48.46%), Query Frame = 0
Query:  134 LFFQQEGCPYSISEQEAADIFNSTSEPGNVISVEKF-GVGRTGNRFESLSLVLSMGYCCRSRLVYLPQEDDVLPTESGDVFQAGQRLFSF--IHATLPSD--GYTQLRDDPDACSPTLELSPDDA--FYLSGYPQTLLDCMNEVYVRGCERAFLGPGLDKDN-ICPKQDPATQT------------------------GVG-NLVVHIRSGDIMTYRGGADHYGDNPADNRGPFGQPPLQYYLNAISEKKWDTITVLTWAWEDALLNPTYTVIEMMAKTRILGENIRLFKVMD 393
            L FQ + CP +IS++EAA +    S PG ++SV     +GR+GN +E ++ V SM +CC+ ++V +P++D VLPTE+GD  +     +SF    A L ++  GY  +  DP+ C P   LS      F   G  + LL CM  V + GC   FL   +  D+  C  +D   +                         G G +LVVH+RSGDI +         D P      +GQPPLQ+YL  I  + W  I+VLT A      NPT+ V++ + K  +LG     +   D
Sbjct:   36 LVFQSDACPQAISKEEAAALEADESLPGGILSVGSLDAIGRSGNHYEVVTRVFSMSFCCQYKVVRMPEQDTVLPTENGDTLELRHNTYSFSSADAALRTEHLGYGDIATDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADDAFCRWKDEGKEERRSLLRATSAVEGEDKRHAGSSPQGKGQSLVVHMRSGDIFS-----PELSDIPW-----YGQPPLQFYLKVIGSRPWSNISVLTNARIQREFNPTFGVLQELDKQGLLGAPANFYADRD 318          
BLAST of mRNA_C-linearis_contig100.700.1 vs. uniprot
Match: A0A6H5K7B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.760e-26
Identity = 95/315 (30.16%), Postives = 133/315 (42.22%), Query Frame = 0
Query:  141 CPYSI-SEQEAADIFNSTSEPGNVISVEKFGVGRTGNRFESLSLVLSMGYCCRSRLVYLPQEDDVLPTESGDVFQAGQRLFSFIHATLPSDGYTQLRDDPDACSPTLELSPDDAFYLSG--------YPQTLLDCMNEV-YVRGCERAFLGPGLDKDNICPKQDPATQT-----------------------------------------------------GVGNLVVHIRSGDIMTYRGGADHYGDNPADNRGPFGQPPLQYYLNAISEKKWDTITVLTWAWEDAL--LNPTYTVIEMMAKTRILGENIRLFK 390
            CPY+I SE+EA +   +TS PGNV+ V  F   R GNRF S+S  LS+GYCC+SRL+ LP +D+ L     +    G R F F  A    +G+     D  +C P +     +AF+L G        Y   L +C+ E+  + GCE A+  P     ++CP  + A +                                                        GNLVVH+RSGDI             P  +   +GQPPLQYY+ AI +++WD + V+T    D    +NP    +E       L  NI   K
Sbjct:  147 CPYAIPSEEEARERSGNTSAPGNVVVVTDFNYCRLGNRFTSMSRSLSLGYCCKSRLLSLPPKDEQLAPGRFNEGIPGPRNFDFSSAP-DVEGF-----DYSSCPPEITWGGTNAFHLQGLRDEGHPYYTPELFECIKELPRIAGCEAAYFFPKDMAVDMCPLDETAERDHNNSNVRDVSEKPRDDAPGVRLDWGERGQGREATXXXXXXXXXXXXXXXXXEGSAGNLVVHVRSGDIFV----------RPHPD---YGQPPLQYYVRAIQDQEWDRVDVVTDGIVDETHAINPVVPALEAKVAEGELAGNIHFHK 442          
BLAST of mRNA_C-linearis_contig100.700.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 1.270e-21
Identity = 86/273 (31.50%), Postives = 124/273 (45.42%), Query Frame = 0
Query:  134 LFFQQEGCPYSISEQEAA--DIFNSTSEPGNVISVEKFGVGRTGNRFESLSLVLSMGYCCRSRLVYLPQEDDVLPTESGDVFQAGQRLFSFIHATLPSDGYTQLRDDPDACSPTLELSPDDAFYLSG--------YPQTLLDCMNEV-YVRGCERAFLGPGLDKDNICPKQ--------DPATQTGVGNLVVHIRSGDIMTYRGGADHYGDNPADNRGPF-GQPPLQYYLNAISEKKWDTITVLTWAWEDALLNPTYTVIEMMAKTRILGENI 386
            + F +  C Y+I   + A     +ST E GNV+ V     GRTGNRF ++   L++GYCC+++ V+LP +DDVL     +    G R F F  A    DG      D   C   +      A  ++G        Y   + DCM +   + GCE A+  P      +CP++        D     G GNLV+H+RSGDI               D   P+ GQPPLQ+YL  + ++ WD I V+T       +NP    +  M  T  L +N+
Sbjct:   52 IAFNKHDCTYAIPNAKVARKQRHDSTIE-GNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAP-DVDGV-----DLGRCPIDIIWENRGAMQMAGLDNPERNKYLPHIRDCMAKAPRLLGCEAAYYFP--QDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFF-------------DRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNV 302          
BLAST of mRNA_C-linearis_contig100.700.1 vs. uniprot
Match: D7G1L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L4_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.670e-19
Identity = 92/314 (29.30%), Postives = 131/314 (41.72%), Query Frame = 0
Query:  141 CPYSI-SEQEAADIFN------STSEPGNVISVEKFGVGRTGNRFESLSLVLSMGYCCRSRLVYLPQEDDVLPTESGDVFQAGQRLFSFIHATLPSDGYTQLRDDPDACSPTLELSPDDAFYLSG--------YPQTLLDCMNEV-YVRGCERAFLGPGLDKDNICPKQDPAT-------------------------QTG---------------------VGNLVVHIRSGDIMTYRGGADHYGDNPADNRGPFGQPPLQYYLNAISEKKWDTITVLTWAWEDA--LLNPTYTVIEMMAKTRILGENIRLFK 390
            CPY+I +E+E  +  +      +TS PGNV+ V  F   R GNRF S+   LS+GYCC+SRLV LP +DD L     +    G R F F  A    +G+     D  +C P ++     AF+L G        Y   L  C+ E+ ++ GCE A+  P      +CP  + A                          ++G                      GNLV+H+RSGDI            +PA     +GQ    YY+ AI +++WD + V+T   ED    +NP    +E       L  NI   K
Sbjct:  146 CPYAILAEEEGHERSDRGGDGGNTSAPGNVVVVTDFNYCRLGNRFLSMGRSLSLGYCCKSRLVSLPPKDDQLAPGRFNDGTPGPRNFDFSSAP-DVEGF-----DSSSCPPEIKWGGTQAFHLEGLRDEGHPYYTPGLFTCIKELPWIIGCEAAYFFPTDMAVPMCPLDETAEGGNKNVRDISEKPKDDAPGIQLDWEESGHGREATEQXXXXXXXXXXXGSAGNLVMHVRSGDIFV----------SPA--HPGYGQ----YYVQAIQDQQWDRVDVVTNGIEDKNHAINPIVPALEAKVAKGQLPGNIHFHK 437          
BLAST of mRNA_C-linearis_contig100.700.1 vs. uniprot
Match: A0A6H5K2F3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2F3_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 9.590e-12
Identity = 84/355 (23.66%), Postives = 124/355 (34.93%), Query Frame = 0
Query:  140 GCPYSI-SEQEAADIFNSTSEPGNVISVEKFGVGRTGNRFESLSLVLSMGYCCRSRLVYLPQEDDVLPTESGDVFQAGQRLFSFIHATLPSDGYTQLRDDPDACSPTLELSPDDAFYLSG--------YPQTLLDCMNEV-YVRGCERAFLGPGLDKD-NICPKQDPATQTGV-----------------------------------------------------------------------------------------------GNLVVHIRSGDIMTYRGGADHYGDNPADNRGPFGQPPLQYYLNAISEKKWDTITVLTWAWEDALLNPTYTVIEMMAKTRILGENIRL 388
            GCPY I + +EA       S PGNV+ VE     RTGN F S    L++GYCC+S++V+LP +DDVL     +    G R F F  A    DG+     D  ACS  +  +   AF++          +   L +C+     +  CE A+  P   KD ++C                                                                                                          GNLV+H+RSGDI + +  A             +GQPPLQ+YL  I    WD++ ++T + E   LNP    ++ M     L +++ +
Sbjct:   93 GCPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAP-DVDGF-----DSSACSADITWAGQRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFP---KDVDLCHATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNLVLHVRSGDIFSDKVLAY------------YGQPPLQFYLQVIQHADWDSVDIVTNSQEHDGLNPVIPALQAMVDAGDLPDSVHV 426          
BLAST of mRNA_C-linearis_contig100.700.1 vs. uniprot
Match: D8LSV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSV8_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 7.600e-9
Identity = 37/108 (34.26%), Postives = 55/108 (50.93%), Query Frame = 0
Query:  187 MGYCCRSRLVYLPQEDDVLPTESGDVFQAGQRLFSF--IHATLPSD--GYTQLRDDPDACSPTLELSPDDA--FYLSGYPQTLLDCMNEVYVRGCERAFLGPGLDKDN 288
            M +CC+ ++V +P++D VLPTE+GD  +     +SF    A L ++  GY  +  DP+ C P   LS      F   G  + LL CM  V + GC   FL   +  D+
Sbjct:    1 MSFCCQYKVVTMPEQDTVLPTENGDTLELRHNTYSFSSADAALRTEHLGYGDISTDPEICPPIKHLSGQKTKEFTREGVHERLLQCMLRVEMIGCVAHFLHDVVGADD 108          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig100.700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FRV9_ECTSI4.640e-7145.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRV8_ECTSI4.430e-5547.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0Z0_9PHAE3.770e-3533.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7B3_9PHAE1.760e-2630.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G610_ECTSI1.270e-2131.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G1L4_ECTSI1.670e-1929.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2F3_9PHAE9.590e-1223.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LSV8_ECTSI7.600e-934.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..393
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig100contigC-linearis_contig100:367391..371148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig100.700.1mRNA_C-linearis_contig100.700.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig100 366018..373528 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig100.700.1 ID=prot_C-linearis_contig100.700.1|Name=mRNA_C-linearis_contig100.700.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=394bp
MQYHRKYLLRSSINVSHPVRPSDANRAASTKYTDWRSALVPSPTVSPFFD
HASFRSTTNRRFGIPRGKLVSLVALRILALGGHLAMHHAGNQTQVELLED
PPTSQGEQDPPGFTLAAGSLSEKEDNPMTTPPRLFFQQEGCPYSISEQEA
ADIFNSTSEPGNVISVEKFGVGRTGNRFESLSLVLSMGYCCRSRLVYLPQ
EDDVLPTESGDVFQAGQRLFSFIHATLPSDGYTQLRDDPDACSPTLELSP
DDAFYLSGYPQTLLDCMNEVYVRGCERAFLGPGLDKDNICPKQDPATQTG
VGNLVVHIRSGDIMTYRGGADHYGDNPADNRGPFGQPPLQYYLNAISEKK
WDTITVLTWAWEDALLNPTYTVIEMMAKTRILGENIRLFKVMD*
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