mRNA_C-linearis_contig100.689.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig100.689.1
Unique NamemRNA_C-linearis_contig100.689.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: D7FTB9_ECTSI (Glucose-6-phosphate 1-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTB9_ECTSI)

HSP 1 Score: 491 bits (1264), Expect = 3.030e-169
Identity = 243/301 (80.73%), Postives = 261/301 (86.71%), Query Frame = 2 
Query:   74 MVLGVIKGETTGQPCVALMHPNGGRVEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSEEP-TPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
            M LGV    TTGQPCVAL HPNGG VEVQLHG+TVTSFKTS G +VLF+SEKA+FNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATW LSEE   P V+GHVKANFVLGHSE+TLAKWPH FSLRYEVDL  DVL+VTLHVTNPGE+AFDFQ LLHTYL++ EIE AK+ GF NV Y+DQ L+N+  F DERPQADFT EVDR       IY+GEIGDVGVVGGT VTNSC KTAPGAAEVCVPVDVVLWNPW+AKAKSL DFGDEE+HKMVCIEPGIV K HSIAPGETFSLKQ+IT
Sbjct:    1 MALGVTTSATTGQPCVALAHPNGGSVEVQLHGATVTSFKTSSGNDVLFLSEKAVFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWSLSEEEGEPAVEGHVKANFVLGHSEETLAKWPHSFSLRYEVDLGADVLSVTLHVTNPGEEAFDFQALLHTYLTVPEIEGAKVNGFQNVQYIDQ-LENNESFKDERPQADFTREVDR-------IYAGEIGDVGVVGGTTVTNSCEKTAPGAAEVCVPVDVVLWNPWIAKAKSLGDFGDEEYHKMVCIEPGIVSKSHSIAPGETFSLKQVIT 293
[Close]
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: W7TQG6_9STRA (Glucose-6-phosphate 1-epimerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQG6_9STRA)

HSP 1 Score: 227 bits (579), Expect = 3.100e-66
Identity = 128/298 (42.95%), Postives = 172/298 (57.72%), Query Frame = 2 
Query:  107 GQPCVALMHPNGGRVEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSEEPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQ---QLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGG----TKVT-NSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIITP 976
            G P V L H  G   EV   G+T+TS+K +  REVLFVS KA+F+G KAIRGG+PLVFPQFGQP K M  HG ART+ W+LS+  T   +  V+A F L  +E T   WP  F L Y + L    L  +L + N GE  F+ Q LLHTYL + +I +  + GF +  +VD+   Q     P T+ R   +   E DR       +Y     ++ ++ G     KV   +C     G+ E     D VLWNPW+ K++++ADFGD EF +MVC+EPGIV  F+S+APG+ F L+Q I P
Sbjct:   16 GMPRVLLKHKAGATAEVYNFGATLTSYKPTPEREVLFVSHKALFDGQKAIRGGVPLVFPQFGQPKKEMAQHGFARTSHWELSD--TAVTEDVVRAVFHLTDTEITRMLWPFSFLLSYTLSLTAQTLTTSLRIENKGEAPFEAQALLHTYLRVRDIGQVALRGFQHHPFVDKVAAQAVERLP-TETRNSVNIAQETDR-------VYQTGANEITLLEGGAERVKVEYTACTVNRDGSDEALPHPDCVLWNPWVQKSQAMADFGDREFQEMVCLEPGIVSAFYSLAPGQAFLLEQTIRP 303
[Close]
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: A0A2R5G5X7_9STRA (Glucose-6-phosphate 1-epimerase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5X7_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.060e-59
Identity = 114/281 (40.57%), Postives = 158/281 (56.23%), Query Frame = 2 
Query:  140 GGRVEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSEEPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGGTKVTNSC---VKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
            G  + V   G T+ S+K ++G E LF SE+   + +K +RGG+PLVFPQFG  +  +P HG ART+ W L + PT E DG V   FVL  +E+TL  WP  F L + +      L  ++HV N GE+AF FQ LLHTY  I +I + ++ G   + YVDQ L+ S  FT+E     F  E DR       IY+   G + ++ G     S    + T     ++  P D VLWNPW  K+K + DFGDEEFH M+C+EPG V ++ +  P  T+ L Q +T
Sbjct:   28 GASIRVTKFGGTLYSYKDADGEEKLFASEEGHTDRSKPVRGGVPLVFPQFGGGE--LPKHGFARTSEWLLEDTPT-EQDGIVTVAFVLESNEETLKIWPFKFKLVHNIVFGASKLQTSMHVVNVGEEAFKFQALLHTYYLIEDISQVQVVGLKGLSYVDQ-LRESNTFTEENDPITFEAETDR-------IYTDAKGPIEILDGKSKKISIELSLSTGEDGTDI-KPCDAVLWNPWTEKSKGMGDFGDEEFHTMMCLEPGCVSRYETCEPNATWVLTQRVT 296
[Close]
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: A0A7S3PID4_9STRA (Glucose-6-phosphate 1-epimerase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PID4_9STRA)

HSP 1 Score: 206 bits (523), Expect = 4.940e-58
Identity = 115/311 (36.98%), Postives = 167/311 (53.70%), Query Frame = 2 
Query:   80 LGVIKGETTGQ-PCVALMHPNGGRVEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKA---MPSHGVARTATWKLS---------EEPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
            +  +K  T G    + + + +G  V+V L+G T+ ++  S GRE LFVS+KA+ +G+K IRGGIPLVFPQFG        +PSHG AR + W            E+     DG V    +L  SE+ LA W HPF L  +V   +  LA  L V NPG + F+FQ LLHTY  +S +E   ++G   + Y+DQ L+      +E  +     E D        IY+     + + G    TN  +  +        PVD V+WNPW+ KAK + DFG EE+ +M+C+EPG V +F +  PG+T++L+Q I+
Sbjct:    1 MATVKSTTFGSLEALEVKNSSGACVKVALYGGTIVAYADSNGRERLFVSDKALTDGSKPIRGGIPLVFPQFGDGQGKYPNLPSHGFARRSKWTFQGSSPTGSSFEDALTNADGSVTFYLILTDSEEILASWNHPFKLTLKVTFDNSNLATELSVENPGTEGFEFQALLHTYYLLSAVENIAVQGLKGLTYIDQ-LQGRIQVKEEGEELPINKETDW-------IYTNATQPLRITG-VDNTNIEISISLKKGNQSHPVDAVVWNPWIKKAKGMGDFGHEEYRRMICVEPGCVSRFETCEPGQTWALEQKIS 302
[Close]
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: UPI001F04F7E2 (putative glucose-6-phosphate 1-epimerase n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04F7E2)

HSP 1 Score: 202 bits (514), Expect = 4.050e-57
Identity = 110/275 (40.00%), Postives = 155/275 (56.36%), Query Frame = 2 
Query:  149 VEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSEEPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
            VEV LHG+TVTS+K  +G+E+LFVS+ A+FNG KAIRGGIP+VFP FG P +  P HG ART TWK+ ++P  +  G++ A  VL  +EQT   W + F   Y + L DD  +  + + N G + F F TL+HTY ++ +I + K+ G H   Y+D+         +ER     +  VD       S+Y     ++ +  G        +  P         D V+WNPW+ KAK ++DFGD E+  MVC+EPG V K + + P E F  KQ IT
Sbjct:   18 VEVYLHGATVTSWKC-KGKEMLFVSKNAVFNGVKAIRGGIPVVFPNFG-PWELGPQHGFARTETWKIHQQPEKDESGNIVAALVLEDTEQTRKIWDYNFKFLYTLTLKDDEFSTEVSIENTGTKGFHFTTLVHTYYNV-DISKMKLRGLHGCEYIDKV--GGGEKKEEREALQISGNVD-------SVYKNTANELLLSTGDHEIRITKENLP---------DTVVWNPWIEKAKQMSDFGDTEYKNMVCVEPGYVAKPYDLRPAEVFKAKQTIT 271
[Close]
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: A0A6S7GEJ5_PARCT (Glucose-6-phosphate 1-epimerase n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GEJ5_PARCT)

HSP 1 Score: 199 bits (506), Expect = 5.940e-56
Identity = 107/275 (38.91%), Postives = 161/275 (58.55%), Query Frame = 2 
Query:  149 VEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSEEPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
            V V LHG TVTS+K  +G+E+LFVS++A+F+G KAIRGGIP+VFP FG P K  P HG ARTATWK+ ++P  + DG++ A  +L  +E+T   W H F   Y + L +   ++ +++ N G + F+F +LLHTY ++ +IE+AK++G     ++D+   N     +E      +  VD       S+Y     ++ ++ G        +  P         D V+WNPW  KAK ++DFGD E+  M+C+EPG V     + P ETF+ KQI+T
Sbjct:   18 VHVYLHGGTVTSWKC-KGKEILFVSKQAVFDGKKAIRGGIPVVFPNFG-PWKLGPQHGFARTATWKVHKQPEKDKDGNIVAVLLLEDTEETRKIWNHNFKFWYTLTLKNCEFSMEVNIQNTGAEDFEFTSLLHTYYNV-DIEKAKLQGLQGCDFLDKV--NGGEHKEENEFLQISANVD-------SVYKQTPNELKLLTGNHNIRITKENFP---------DTVVWNPWFEKAKQMSDFGDNEYQDMICVEPGFVAAPCKLQPNETFTAKQILT 271
[Close]
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: A0A3M6VKU2_9STRA (Glucose-6-phosphate 1-epimerase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKU2_9STRA)

HSP 1 Score: 199 bits (506), Expect = 1.280e-55
Identity = 122/306 (39.87%), Postives = 168/306 (54.90%), Query Frame = 2 
Query:  104 TGQPCVALMHPNGGRVEVQLHGSTVTSFKTSEG--REVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSE--EPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKI--EGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDR-------RVFMRASIYSGEIGDVGVVGGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIITPSA 982
            T +  V L HP+G R +V L+G+TVTSF T++   R VLFVS+KA+ +G+K IRGGIPLVFP FG  +   P+HG AR   WKL +  +   E +  V A F L  S+   A +PH F+L YEV L  +VL   +H+ N  E    FQ LLHTYLS+ ++    +  EG   + Y D+         + R    F  E D         VF+R    +G+   V     T    +C+K+  G++ +    DVV+WNPW  KAK + DFGDEE+  M+C+EPG V     +  G TF+L+Q I  SA
Sbjct:    4 TKESVVELRHPSGSRAQVYLYGATVTSFYTAQEPTRNVLFVSKKALLDGSKPIRGGIPLVFPVFGAAE-GFPNHGFARIHKWKLDQLIQSANEDESPVVATFSLDVSDDIKAMYPHDFALVYEVKLCANVLTTAIHIQNKSEGEISFQALLHTYLSVDDVRGGGVVVEGLKGLMYYDKVAAEEK--IEHRDTLSFCQETDSVYANAPSPVFVRIKRANGKEQVV-----TIEKEACIKS--GSSHMSQDSDVVVWNPWSDKAKEMNDFGDEEYPAMLCVEPGRVSDQQKLLAGHTFTLQQAIKVSA 299
[Close]
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: A0A662XI35_9STRA (Glucose-6-phosphate 1-epimerase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XI35_9STRA)

HSP 1 Score: 199 bits (506), Expect = 1.390e-55
Identity = 119/301 (39.53%), Postives = 170/301 (56.48%), Query Frame = 2 
Query:  119 VALMHPNGGRVEVQLHGSTVTSFKTSEG--REVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSE--EPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEI--EEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGV----VGGTKVTNSCVKTA---PGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIITPSA 982
            + L HP+G R EV L+G+TVT+F  ++   R VLF+S++A+ +G+K IRGGIPLVFP FG      P+HG  RT  WKLS+  +   + D    A F +  ++ T A +PH F L YEV L  + LA  LHV N  +    FQ LLHTYLS  ++  E   +EG   + Y D+   +    T++R    F  E D       S+Y+     V V      G +   +  K+A    GA++     DVV+WNPW+ KAK++ DFGD+E+  M+C+EPG V +   +A G+TF+L+Q I  SA
Sbjct:   12 IELRHPSGSRAEVYLYGATVTAFYAAQEPERNVLFLSKQALLDGSKPIRGGIPLVFPVFGSAP-GFPNHGFVRTTNWKLSQLDQTVGDDDSPTVATFAMAATDATKAMYPHDFDLVYEVKLFANSLATALHVHNKSDGEIAFQALLHTYLSADDVRNEAVTVEGLKGLQYHDKVAADEK--TEDRALLSFAQETD-------SVYANAPSPVVVRMKRADGREQVVTIEKSAFIKSGASQTAQDSDVVVWNPWVDKAKAMGDFGDDEYPTMLCVEPGRVSEQQKLAAGQTFTLQQAIKLSA 302
[Close]
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: UPI00106A87BB (putative glucose-6-phosphate 1-epimerase n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A87BB)

HSP 1 Score: 195 bits (496), Expect = 1.700e-54
Identity = 110/287 (38.33%), Postives = 159/287 (55.40%), Query Frame = 2 
Query:  113 PCVALMHPNGGRVEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSEEPTPEVDGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTCEVDRRVFMRASIYSGEIGDVGVVGGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
            P + L   +   VEV LHG TVTS+K   GRE+LFVS+ A++NG KAIRGGIP+VFP FG P +  P HG ART TWK+ + P  + DG++ A  +L  +E+    W + F   Y + L D    + +++ N G + F+F TLLHTY ++ ++E+ KI+G     ++D+        TD+  Q   +  VD       S+Y     ++ +  G        +  P         D V+WNPW  KAK ++DFGDEE+H MVC+EPG V     + P E+F  KQ +T
Sbjct:    6 PKIHLKKDDSSEVEVCLHGGTVTSWKC-RGREMLFVSKNAVYNGKKAIRGGIPVVFPNFG-PWELGPQHGFARTETWKVHKSPEKDEDGNIVAILLLEDTEELRKIWNYNFKFWYTLILKDREFIMEVNIQNTGSKEFEFTTLLHTYFNV-DVEKVKIQGLQGCDFIDKINGGERKETDKYVQ--ISGNVD-------SVYKQTSNELLLFTGDHNIQIKKENFP---------DAVIWNPWSEKAKQMSDFGDEEYHDMVCVEPGYVSSSFKLQPNESFKAKQTLT 271
[Close]
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Match: A0A197K0K7_9FUNG (Glucose-6-phosphate 1-epimerase n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K0K7_9FUNG)

HSP 1 Score: 194 bits (493), Expect = 6.210e-54
Identity = 122/298 (40.94%), Postives = 167/298 (56.04%), Query Frame = 2 
Query:  125 LMHPNGGRVEVQLHGSTVTSFKTSEGREVLFVSEKAIFNGAKAIRGGIPLVFPQFGQPDK-----AMPSHGVARTATWKLSEEPTPEVDGHVKANFVLGH---SEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQAFDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFTC--EVDRRVFMRASIYSGEIGDVGVV-----GGTKVTNSCVKTAPGAAEVCVPVDVVLWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT 973
            L HP+G   EV L+G+T+TS+  +  +E +FVSEKAI +G+KAIRGGIPLVFP FG+        A+P HG AR + WKL    + + D  V A F L H   SE+    WP  FSL Y V LA + +   L V N G+++FDF TLLHTY  I +  + K+ G   V YVD+ L  +A       Q D     EVD       S+Y+    DV +      GG +V    +             DVV+WNPW+AKA  +ADFG+EEFHKM+C+E G V +F ++A G ++   Q+++
Sbjct:   12 LTHPSGASAEVYLYGATLTSWNVAN-KERIFVSEKAILDGSKAIRGGIPLVFPVFGKGKAPHVTAALPQHGFARISLWKLLNS-SDDADT-VTAEFGLDHTLISEENRKLWPFDFSLVYTVKLAAETIETKLRVHNVGDKSFDFNTLLHTYFLIPDASKVKVVGLSGVDYVDKVLATTA-----HQQGDIVIKGEVD-------SVYANVKSDVQIPYVAEQGGVQVHLKGLN------------DVVVWNPWVAKAAGMADFGNEEFHKMICVEAGQVAEFIALAAGGSWEGSQVLS 282
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig100.689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTB9_ECTSI3.030e-16980.73Glucose-6-phosphate 1-epimerase n=2 Tax=Ectocarpus... [more]
W7TQG6_9STRA3.100e-6642.95Glucose-6-phosphate 1-epimerase n=2 Tax=Monodopsid... [more]
A0A2R5G5X7_9STRA1.060e-5940.57Glucose-6-phosphate 1-epimerase n=1 Tax=Hondaea fe... [more]
A0A7S3PID4_9STRA4.940e-5836.98Glucose-6-phosphate 1-epimerase n=1 Tax=Aplanochyt... [more]
UPI001F04F7E24.050e-5740.00putative glucose-6-phosphate 1-epimerase n=1 Tax=X... [more]
A0A6S7GEJ5_PARCT5.940e-5638.91Glucose-6-phosphate 1-epimerase n=2 Tax=Paramurice... [more]
A0A3M6VKU2_9STRA1.280e-5539.87Glucose-6-phosphate 1-epimerase n=2 Tax=Peronospor... [more]
A0A662XI35_9STRA1.390e-5539.53Glucose-6-phosphate 1-epimerase n=2 Tax=Nothophyto... [more]
UPI00106A87BB1.700e-5438.33putative glucose-6-phosphate 1-epimerase n=1 Tax=D... [more]
A0A197K0K7_9FUNG6.210e-5440.94Glucose-6-phosphate 1-epimerase n=1 Tax=Linnemanni... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig100contigC-linearis_contig100:229837..237519 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score493.0
Seed ortholog evalue9.7e-137
Seed eggNOG ortholog2880.D7FTB9
KEGG rclassRC00563
KEGG koko:K01792
KEGG ReactionR02739
KEGG Pathwayko00010,ko01100,ko01110,ko01120,ko01130,map00010,map01100,map01110,map01120,map01130
Hectar predicted targeting categoryother localisation
EggNOG free text desc.glucose-6-phosphate 1-epimerase activity
EggNOG OGsCOG0676@1,KOG1594@2759
Ec32 ortholog descriptionGlycoside hydrolase-type carbohydrate-binding, subgroup
Ec32 orthologEc-05_000290.1
EC5.1.3.15
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons12
Model size1761
Cds size912
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig100.689.1prot_C-linearis_contig100.689.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig100 229910..236743 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927356.875324-UTR-C-linearis_contig100:229836..2299091622927356.875324-UTR-C-linearis_contig100:229836..229909Chordaria linearis ClinC8C monoicousUTRC-linearis_contig100 229837..229909 +
1690879649.9542022-UTR-C-linearis_contig100:229836..2299091690879649.9542022-UTR-C-linearis_contig100:229836..229909Chordaria linearis ClinC8C monoicousUTRC-linearis_contig100 229837..229909 +
1622927357.0556319-UTR-C-linearis_contig100:236743..2375191622927357.0556319-UTR-C-linearis_contig100:236743..237519Chordaria linearis ClinC8C monoicousUTRC-linearis_contig100 236744..237519 +
1690879650.0874703-UTR-C-linearis_contig100:236743..2375191690879650.0874703-UTR-C-linearis_contig100:236743..237519Chordaria linearis ClinC8C monoicousUTRC-linearis_contig100 236744..237519 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927356.8871057-CDS-C-linearis_contig100:229909..2299651622927356.8871057-CDS-C-linearis_contig100:229909..229965Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 229910..229965 +
1690879649.970873-CDS-C-linearis_contig100:229909..2299651690879649.970873-CDS-C-linearis_contig100:229909..229965Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 229910..229965 +
1622927356.9006274-CDS-C-linearis_contig100:230832..2309031622927356.9006274-CDS-C-linearis_contig100:230832..230903Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 230833..230903 +
1690879649.978938-CDS-C-linearis_contig100:230832..2309031690879649.978938-CDS-C-linearis_contig100:230832..230903Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 230833..230903 +
1622927356.9170873-CDS-C-linearis_contig100:231694..2317801622927356.9170873-CDS-C-linearis_contig100:231694..231780Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 231695..231780 +
1690879649.9898815-CDS-C-linearis_contig100:231694..2317801690879649.9898815-CDS-C-linearis_contig100:231694..231780Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 231695..231780 +
1622927356.9303005-CDS-C-linearis_contig100:232302..2324041622927356.9303005-CDS-C-linearis_contig100:232302..232404Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 232303..232404 +
1690879650.0001674-CDS-C-linearis_contig100:232302..2324041690879650.0001674-CDS-C-linearis_contig100:232302..232404Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 232303..232404 +
1622927356.9411762-CDS-C-linearis_contig100:232723..2327821622927356.9411762-CDS-C-linearis_contig100:232723..232782Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 232724..232782 +
1690879650.010046-CDS-C-linearis_contig100:232723..2327821690879650.010046-CDS-C-linearis_contig100:232723..232782Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 232724..232782 +
1622927356.9590874-CDS-C-linearis_contig100:233269..2333571622927356.9590874-CDS-C-linearis_contig100:233269..233357Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 233270..233357 +
1690879650.0184693-CDS-C-linearis_contig100:233269..2333571690879650.0184693-CDS-C-linearis_contig100:233269..233357Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 233270..233357 +
1622927356.9703782-CDS-C-linearis_contig100:233870..2339541622927356.9703782-CDS-C-linearis_contig100:233870..233954Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 233871..233954 +
1690879650.0291123-CDS-C-linearis_contig100:233870..2339541690879650.0291123-CDS-C-linearis_contig100:233870..233954Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 233871..233954 +
1622927356.9820776-CDS-C-linearis_contig100:234415..2345041622927356.9820776-CDS-C-linearis_contig100:234415..234504Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 234416..234504 +
1690879650.0399013-CDS-C-linearis_contig100:234415..2345041690879650.0399013-CDS-C-linearis_contig100:234415..234504Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 234416..234504 +
1622927356.9970915-CDS-C-linearis_contig100:234997..2350881622927356.9970915-CDS-C-linearis_contig100:234997..235088Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 234998..235088 +
1690879650.0489779-CDS-C-linearis_contig100:234997..2350881690879650.0489779-CDS-C-linearis_contig100:234997..235088Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 234998..235088 +
1622927357.0117428-CDS-C-linearis_contig100:235601..2356551622927357.0117428-CDS-C-linearis_contig100:235601..235655Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 235602..235655 +
1690879650.0599725-CDS-C-linearis_contig100:235601..2356551690879650.0599725-CDS-C-linearis_contig100:235601..235655Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 235602..235655 +
1622927357.0243034-CDS-C-linearis_contig100:235943..2360201622927357.0243034-CDS-C-linearis_contig100:235943..236020Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 235944..236020 +
1690879650.068417-CDS-C-linearis_contig100:235943..2360201690879650.068417-CDS-C-linearis_contig100:235943..236020Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 235944..236020 +
1622927357.0417757-CDS-C-linearis_contig100:236688..2367431622927357.0417757-CDS-C-linearis_contig100:236688..236743Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 236689..236743 +
1690879650.0782397-CDS-C-linearis_contig100:236688..2367431690879650.0782397-CDS-C-linearis_contig100:236688..236743Chordaria linearis ClinC8C monoicousCDSC-linearis_contig100 236689..236743 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig100.689.1

>prot_C-linearis_contig100.689.1 ID=prot_C-linearis_contig100.689.1|Name=mRNA_C-linearis_contig100.689.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=304bp
MVLGVIKGETTGQPCVALMHPNGGRVEVQLHGSTVTSFKTSEGREVLFVS
EKAIFNGAKAIRGGIPLVFPQFGQPDKAMPSHGVARTATWKLSEEPTPEV
DGHVKANFVLGHSEQTLAKWPHPFSLRYEVDLADDVLAVTLHVTNPGEQA
FDFQTLLHTYLSISEIEEAKIEGFHNVGYVDQQLKNSAPFTDERPQADFT
CEVDRRVFMRASIYSGEIGDVGVVGGTKVTNSCVKTAPGAAEVCVPVDVV
LWNPWMAKAKSLADFGDEEFHKMVCIEPGIVGKFHSIAPGETFSLKQIIT
PSA*
back to top

mRNA from alignment at C-linearis_contig100:229837..237519+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig100.689.1 ID=mRNA_C-linearis_contig100.689.1|Name=mRNA_C-linearis_contig100.689.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7683bp|location=Sequence derived from alignment at C-linearis_contig100:229837..237519+ (Chordaria linearis ClinC8C monoicous)
CGGAACAGAGAAACAAAACCACCGACAAAGAACCGACAGGGGCACATAGG
CATCCAACAAGCTCGTGGAAAACATGGTCCTGGGCGTGATTAAGGGTGAA
ACCACAGGCCAGCCATGCGTGGCCTTGATGTGAGTATGTCAGTCTCTCTG
TCTCTCTATCGGGTGAGTGTTCGTTCTGCTGCGTGTGTTTGTTCTTGACG
AAGCGCATCAAGTGTATCAAGCGCCCTGGTCTCGTGCTACCTTCTTCCAT
GCGCACCTCTTACCTTTCAAAACGATTTGAAGTGGTCAGTAGTGCTTGCA
CACCCCACCAATATCTGCTGTGTGTGTCGAAAGCAGCAGGTCCCCTTCGG
GCTGCTCTCGGCAGAATATCGCCGAGCGATCGGGTAGTCTATTGCACCGC
ATTTTTTCCGGGCGCGCCCGGGAACAACTGCTGCACAGCAGTACTGGTGT
GCAGCCGACGTTGTATGTGTAGTAGGCCATCAAAGACGGCCCAGCTCCAT
CTTCCGATGGGCCAGCTATCTCAGACGGCAGTCGAGAGCTCTATCGAGAT
GGGGAGAAGTAGTTTCCTCTCGTGGTTGTTTTGCTTTGGGGGCTGTGGAG
CGAGAGCCTCTTGCTGCGTCCCGCCGTGCGTATCAGAACTTTGCGCGAAA
GCTAAACTAGCACCACGGCCGTTGTCCCCGTGCTGGCTCGCAAAAAAGAA
AGACTAGTGTTAAGGTCCTCCCCCGCTCCTCTTTTTTTTTTCGTGGAGCA
AGACCTTTCAGAGATGCGTGTATGTACATGCGTTCCACATGAATTAGGCA
GAGGTTTTCATTTCCGAGGCAAACACAGCAGTAGACCAACACATGTGGGC
ATGTAGCTCTCGCACGGCGTTTAAACAACTACCAATATTGCTTTTTTTGT
GTCAAATATTTTTTCTGTCGTGTTGTTTTTGGTTTCTTCTGATGGAAAAT
AACTCCTTCTGGTGCCATCTACTGCGGTACACACGCCCAATGCCAGGCAC
CCGAATGGAGGCAGAGTGGAGGTACAGCTTCACGGCTCCACCGTAACGAG
CTTCAAGACCTCCGAAGGTATTTATCATGCACGAGCACGGGTAAGCGGCA
CCTAGGCTGCGTTGAGCGAAAAATTTGCAGGGATTAGGTATCGGTGAACA
TCGGCTTGCGAAACGAAAACCTACAAGTACCGGATCAGTAAAAAGTTGCG
CATATATTCCGATCGCCTGCCATGTACACCCCCCTGCTGCTCTCTAAACG
GAGTTCCCTGCTGGCTGCTGCGTGCCATGGCGGCCATTGTTTTTTTGTCG
CATCAGCGCAGCTAAAAGCGCCATATCTGCCACCGCTCTTTTCGTACGGG
TCGGACGAAATTCACCCCGATTTCGTCTCACCGCACATGTGGCGAATTCG
CCACACGAGAACCGGGTGCCTGGCGGCGCTGTGTGGTGGAGATGGGCTTC
GTGCTTTTGTGTTGGCTATTTTCTTATTTTTCACGATCTGCACTCTCCCG
TGTTGAATGCGTTCGAAGTATGTTGTTGTGTGTCTCTGATACCCAACGCG
ACTTGGGCGCCGAAAGGCGATAAGACAGAGTAGCGCTTATTTTGTTCGGC
TTTTCTTTCAGGGGTGTGTTCTTGTGGATGTTTTTACACACCTACACACC
CTCCAAGCAGACGGGGTGCTCTCTTTCTCTCTTTCTCTCCCTCTCCCCCC
TCCTGTTAGCGAAAGAGGGGTCTGATCCCCTCGCAACCTGCACTACTGCT
GTGTTCTTTGCCCTTGCTTTCACCTCCACCCCTACCCTTTTGACTACCTT
GACCCCTTATGTCCACCTGTACCCTCTCCTCTCTAAACTAACCTCACCTC
GCGAACAGGGCGTGAGGTGCTTTTTGTTTCGGAGAAGGCCATCTTCAACG
GAGCCAAGGCTATCCGGGGCGGAATCCCGCTAGTTTTCCCTCAGGTACAG
TCAGCCGGCTGGTCGGGCGCGGTCGACAAAAAAAAGCACCAGAATCAGAA
AAGAATAGAACGGAACAGGATGAACATGCCGGGCTTTGGTGGGCACGCAT
TCAACCTGCTTTCGGGGGGGGGAACACCCGAGACGAGGTACAACATACTG
ACATGTTTGGTGTGACATGTGCCGCTCAGGACAGGTAAGGACAGGTTTGG
TGGTTCCTGTCATGGAGAAACGTGGCTATGAAGCGGATACGATGGCTGAG
CAACCGCAAAAACAAACAAAAACACCGCATTCAGGCCGCACCCGTCGTTC
TCTAGCCTCCCCGCTACCAACCGTTTGTAACACAATATATATTTTTAACT
TTCCGTTCCTTCACAGGCAGGAGGAGTGCTTAGGGGCATAGACAGGCTCA
AATCTGGCTTCGAGGTACATACTGTATGTAGCAGGTCGCTCTGTGAATAA
CAATGCACTTCCCCCGGCAATGTTTTTGTTTGTTTGTTTTGGATGGTGTG
TTTTCCCCCGAAACAGTTCGGGCAGCCCGACAAGGCGATGCCGAGCCACG
GCGTCGCGCGCACGGCGACTTGGAAGCTTTCGGAGGAGCCGACGCCCGAG
GTCGACGGCCATGTCAAGGTCAGTTCAGTGTTTTGTGTGTGTGCGTGTGC
GTGTCTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTTTCGTGGTTTCCGC
CCCTGAGGGCATCTATCTCCCATGTCTCCCGTATCTCTCACATTTTCGAT
GAGTTTCTCTATGGCTTGCCACCCCTCCATCTGTGTTTGTAGTTTGTATT
GTCTCTGACTCTTTGTGGTCCATTCCTATTCCCGGGGTTGCTTTTTCTTT
TTTTTGTTCTGTTTTAAAACCTTTTTTGTGGCCACAGGCTAACTTCGTGC
TGGGGCACTCGGAGCAAACTCTCGCCAAGTGGCCCCACCCCTTCAGGTAC
CTGCTGCGGACCCGGTTTCGATTCACGCAACCCCGAACATCTTCTCCATT
TTGTAGAACTTAAATTATAGCCCAGTCTCTCCCTTTGCAGGTCCTTCCGA
CCCCCCGCGGCGATGAGATGGTGCTACATGTATTAATAATACACAAACCG
CACCTCAAGTCGCCCCACGCCCTCGGCGCTCTGGCTGAAGCTCGCTCTTT
CTTGGGACCCTAGGGTTAGCCTTTCAAATCTTGGAGTACACTGATTCATC
CATTCTGGGAGCCCAGGTCAGGGTCAGCTCAATTCTGATTCTTGCAGGAC
GGTAATTTGTTGGACCGCTGTGATTGAGCCTCTTTATGCGTTGGTCCAGC
CCGAGCGGTCCATTCCATTCTCTCCCCGAAGATGAATTTAAATCCCTTTC
CCTTACCTTACCTTACCTCGGTGTTCAAATCGAACGAACGCTAACCGCTA
ACTCGGATTGATTAAATCGATTACATGGAATAGCCTGCGGTACGAGGTGG
ACCTCGCCGATGACGTCCTCGCCGTTACCCTGCACGTCACCAACCCGGGC
GAGCAAGCGTTCGATTTCCAGGTACGTACGTACGTCATCCGATCCTAATC
CTTAGGATTTGTGACTAAATCGGTGAATCTTGCTCTCCTTTTGTCACCCT
CGAGACATAAACCTTATCCTCTGTCGCTCCTTGTAGGTGAACCTTGGGTC
CTTTTGAACCCCTGGAAATCACTCCAAGCAAAATACAACCTAAACCTTCG
TCACTATTTCGGCGAATCTTGCTGTATTGTGTGGCCCCTAGATTAACCCC
AAATATACCGTGGTAGGCTGTACGCTAACCCGAGGTCCAAATTCGTAGAG
ATACTTCACAAGGCGTTGCTATTGTTTCCCGCACGTACGAAGGTTGTCGG
TCTGGAAGATCGAGGGAGAGCATCTTAAATTTCTATTGGCCAGGCCAAAC
AGTCTTTTGGTGTTCATTGGATCAACCAAACAGTCTTTTGGTGTTCATTG
GATCAACCAAACAGTATTTTGGTGTTCATTGGATAAACCAAACAGTCTTT
TCGTGATTGGTGTTTTGTTGCTGTTGTGCGCCAGACGTTGCTTCACACGT
ACCTGTCCATTTCGGAGATCGAGGAGGCCAAGATCGAGGGCTTTCACAAC
GTCGGCTACGTCGACCAGGTGGGTAGAGGTTGGTGGTTGTCGTCAGTAAC
GTTTACAGTAAGGTGGAAGGTAAAATAAGGTAAAGCGCGAAGGTCTTGCC
GACGTCGGTGTTGTGTGCACCAGAAGCCCGCAGAGGTGTCAAACGTGCCC
CTTTCACGCTAACGTAACCGAGCTCTTATTACAGCAGCGCGGCGATGGAC
GCCTTCTTAATTTACCCAGTCCCAAGTATTACTCTACGCCTTAGCTTCAA
ACTCGCCCTTCCGACACACCTGTGACCTCTACAACCCCTTTTGTGCTGCC
CGCGCTTCAAAGCAGTCGAAGGCCGTACCGCGTCAAAGCACTTTTTACCT
CAACTCCAAACCATACCCATGCCAACTTTACGTCGACAACCACGGACACT
ACCGTTACCATAACCCCCAACACTACCCGTAGAATGTGTACTTCTTCCTT
AGCCCATCCCCCTACGACACCTTTTCAAGCAGTTGAAGAACAGCGCCCCC
TTCACGGACGAGCGACCGCAAGCCGACTTCACCTGCGAAGTTGACAGGCG
AGTTTTCATGCGTGCTTCGTGTTTGCTCTGGAGGTGCTGGTGCATCTCTT
ACCGTCGGCCCCTTGGCTTCGGAGTTCCGATGCGTCCCTTGTCGTGTATG
TTTTTGCTTTGGGGTGCTGATCCCCCCTTGCTCTGTGGCTTGCGTTTTTT
GAAAATGTTGCAGTAGGGTTAGTAGGGATTTCTCATGGCGTGTGCCACTC
GAAACATCGCAGCTGCAGGTAGGCGGGCGTTGGAATGGACCCCAGTAGCG
CCTGGCTCTGGATACTAGCGTCTAAGGCTCCCGCTTTACCCCTCCGCTTC
TAGAAGTGATGTCTGTTGAATGTTGCGAACCTTGGTCATGGTATTTTAAG
CAATATCTTTACGTTCATGTTCGTGTGCCCGTGCGTGCCTACTGATACTC
TGGTGCACTACACCGGATTTTTTTGTAAGCTGACAGTTAGCTTCCGTCCG
TACCCTACGTTTCCCCCCCGCGCTTACACAATGAATCCGCCCTTGACTTG
ACCACCTGCAGGATCTACAGCGGCGAGATCGGAGATGTGGGTGTAGTAGG
GGGCACAAAGGTGACCAACAGCTGCGTCAAGACAGCACCGGGGGCTGCTG
AGGTAAGCCTAGAGCCTAACCTGCATGATAGGCTAGTCGAAACTGGTTGT
ACGTGGGAGTGACGCTGCCCACCAATCGCCACCTGAATTGAGCGTCGAGC
AAGTAACGGGACTAGCCGAGGCAGGCGGCCGAGGAGATGGCTAGAAATCA
GCCGGGTATCCCACGAGTGTAGCACTTACTACCCAAACCGATCCTGCCCT
CGCGCCAACCAGTGGAGGGCAGTCGAGAGGGATACCACTGCTGTACCTTT
GGGCTAACTGGAAATGCTATCGAACAACTCGTTGTGCACGGCGCGCGCCT
TTGTTGTGAGCACGTCACGCAACGTCCATCTCTCCAAGCCCACGTAGAGC
GAAACGTGCGTGGCTCTTCGTATCACGACGCTAATACCGCCGCTCAGCAG
CCTTGTTGGGGCCGGGCTTGAGAAGCGGGCGTCTTTTTATTTTTTGGTGT
CTTACAGCGCCGCGTTTTTCGCCGTTCCTGCGTGCACCCAATCGAACCTA
ACCGCTGCATTGTAGGTGTGCGTGCCTGTGGATGTGGTGCTGTGGAACCC
ATGGATGGCGAAGGCCAAGGTAAGCAAGCCATCGCTAGAGTTCGGGGGCG
GGGGCAGAACCAAGAGGTGGCGGTTGAAGCAGCGATGAGTGGGGACCGTG
TGCCGTTGTTGAAGACACGCGCAGGACAATCAACACGTGCTGCCGCAGTG
AAAACAAGCCGCACGACTGAAGGTCGGTGGCCTGCTGATCGGGCCCTGAC
GCTTCAGAAGTAGGTTGCGTTTCAACAAGATGGAGTTGACGTTTATTTTG
TTACCTGTTTCATATACTGGTACTATTTTGTTGCGTTTGTTGTTTCTCTT
GTCGCAGAGCTTGGCCGACTTCGGCGACGAAGAGTTCCACAAGATGGTCT
GCATCGAGCCGGGAATAGTCGGCAAATTCCACAGGTATGATATGCGCGAG
AAGTATCATTCTATCCCGCTACAAGCACAGATTACCGAACAACACTCGGA
GTTGATTTCCACCACATGCACCGGAATACAGACATGCCGACAGGTATCAG
CGTCGCACACCCATTGTCTATTTTGTCTCCATGCCACCTGCTATTGGCGT
TGAGCGGGTCCTGCGCAAGCCCGCGTTTCTTGGTATCGGCGCGTTCTTTT
ATAGATGCGTTCGCCAGTTTCATGTACCGGTTGAGTTTCTAGACCGGTCC
TTCAACGGACAGAAGCGCTTCGTGGTTATTGCCGTTCTTGTTTCGCTGTT
GCGGTGCATGGTCCCCCTTCGTGTTATCGATTTATGGTTTTACGTGTGGA
GTGTGGCTCGCATGCCTTTCCATGGCCTCAATTGGCGATCCTCTGTTTGC
CCATGGGGGTTACGGAACTGCATTTTTTTGGGTCTAGTTGGTCTTCGTTT
GATCATGCATGTTCATGCTCATGTGCGTGTTCGTATCCATAGGTATGCCT
TCCAATTTCGACCTCCTCTCGTTCCCTTTTGAACCGCCAGGTAGCCATGT
CGAGGGTCACTCGGTCGTTTTCAATGCTTCTTTGAAGACACCATCATGTT
TGATGCTAGTTGTTTCCTCCTTCTCCTCCTCCTTCTCTTTTTCCTTCTCC
AGCATTGCCCCCGGAGAAACCTTCTCCCTGAAGCAGATCATCACACCGTC
GGCGTAAATTCTACCACATTTTTGTCGAGTTACGGGACTCGCGGGTGTCG
GAGGTCACAGGCTAGTTGTTGAGTAGCCATCAGGGGTGACCTTGGACGTG
AGCGAGGAACGTAAGGGAACCTAGGCTGGCTCTCAGATGCCAAAGGGAAT
GGTGCTCAGTCTCCTCCCCTCTCCTTCAGAGTTTATCGAGCTATTTTCTA
GGTTCCTCGTGTTTAAGGACGTCGGTTGGGCCGCTCAGGAACCTGCACCG
TTTATAGTACGACGTCTCGGGCTGGAGTTCTGTTGTGCTGTGGTCGACCA
GCAACCAAGTGGAGCCGAGATCACTCTGGGACCTTGTGCATGCCGTAGGG
TCGGACGGGCGGTTTTATGTTTTATTGGTAGGCGTTGCCGGACCGGACCG
CTCTTTGGGGTCAAAAATCTCCGGTGGAATTGCTCAGCCGGAGACCGCCC
CTCCCTGTCGTTCGGTTGGTACCGTCGTACACCCCTGACTGCAAAGTTGC
GGCGTTTACTACCTCTGGGATCTGGGGCAATCCAATCGAACTTGAGGGTT
CCCTTCTCCTCTGAGAAACATGCCGCCATGAGGCGATACAGCAGTAGGTC
GAAGACTTTGCCGATGATGTGCGATCGTTGGTGTTGGCGACTTGATCGGA
GGACGAAGGGCGGCTATATTATGTCCACCGCCCTTCTTCCCCACTTGGTG
ATATATGTGTACGTACCAGGTATCTAAAGGTACGGTTTCGCAACGGCGAC
GACAACCGCGGCATCGCCCCCTTTTTTCTGCGC
back to top

Coding sequence (CDS) from alignment at C-linearis_contig100:229837..237519+

>mRNA_C-linearis_contig100.689.1 ID=mRNA_C-linearis_contig100.689.1|Name=mRNA_C-linearis_contig100.689.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1824bp|location=Sequence derived from alignment at C-linearis_contig100:229837..237519+ (Chordaria linearis ClinC8C monoicous)
ATGGTCCTGGGCGTGATTAAGGGTGAAACCACAGGCCAGCCATGCGTGGC
CTTGATATGGTCCTGGGCGTGATTAAGGGTGAAACCACAGGCCAGCCATG
CGTGGCCTTGATGCACCCGAATGGAGGCAGAGTGGAGGTACAGCTTCACG
GCTCCACCGTAACGAGCTTCAAGACCTCCGAAGGCACCCGAATGGAGGCA
GAGTGGAGGTACAGCTTCACGGCTCCACCGTAACGAGCTTCAAGACCTCC
GAAGGGCGTGAGGTGCTTTTTGTTTCGGAGAAGGCCATCTTCAACGGAGC
CAAGGCTATCCGGGGCGGAATCCCGCTAGTTTTCCCTCAGGGCGTGAGGT
GCTTTTTGTTTCGGAGAAGGCCATCTTCAACGGAGCCAAGGCTATCCGGG
GCGGAATCCCGCTAGTTTTCCCTCAGTTCGGGCAGCCCGACAAGGCGATG
CCGAGCCACGGCGTCGCGCGCACGGCGACTTGGAAGCTTTCGGAGGAGCC
GACGCCCGAGGTCGACGGCCATGTCAAGTTCGGGCAGCCCGACAAGGCGA
TGCCGAGCCACGGCGTCGCGCGCACGGCGACTTGGAAGCTTTCGGAGGAG
CCGACGCCCGAGGTCGACGGCCATGTCAAGGCTAACTTCGTGCTGGGGCA
CTCGGAGCAAACTCTCGCCAAGTGGCCCCACCCCTTCAGGCTAACTTCGT
GCTGGGGCACTCGGAGCAAACTCTCGCCAAGTGGCCCCACCCCTTCAGCC
TGCGGTACGAGGTGGACCTCGCCGATGACGTCCTCGCCGTTACCCTGCAC
GTCACCAACCCGGGCGAGCAAGCGTTCGATTTCCAGCCTGCGGTACGAGG
TGGACCTCGCCGATGACGTCCTCGCCGTTACCCTGCACGTCACCAACCCG
GGCGAGCAAGCGTTCGATTTCCAGACGTTGCTTCACACGTACCTGTCCAT
TTCGGAGATCGAGGAGGCCAAGATCGAGGGCTTTCACAACGTCGGCTACG
TCGACCAGACGTTGCTTCACACGTACCTGTCCATTTCGGAGATCGAGGAG
GCCAAGATCGAGGGCTTTCACAACGTCGGCTACGTCGACCAGCAGTTGAA
GAACAGCGCCCCCTTCACGGACGAGCGACCGCAAGCCGACTTCACCTGCG
AAGTTGACAGGCGAGTTTTCATGCGTGCTTCCAGTTGAAGAACAGCGCCC
CCTTCACGGACGAGCGACCGCAAGCCGACTTCACCTGCGAAGTTGACAGG
CGAGTTTTCATGCGTGCTTCGATCTACAGCGGCGAGATCGGAGATGTGGG
TGTAGTAGGGGGCACAAAGGTGACCAACAGCTGCGTCAAGACAGCACCGG
GGGCTGCTGAGGATCTACAGCGGCGAGATCGGAGATGTGGGTGTAGTAGG
GGGCACAAAGGTGACCAACAGCTGCGTCAAGACAGCACCGGGGGCTGCTG
AGGTGTGCGTGCCTGTGGATGTGGTGCTGTGGAACCCATGGATGGCGAAG
GCCAAGGTGTGCGTGCCTGTGGATGTGGTGCTGTGGAACCCATGGATGGC
GAAGGCCAAGAGCTTGGCCGACTTCGGCGACGAAGAGTTCCACAAGATGG
TCTGCATCGAGCCGGGAATAGTCGGCAAATTCCACAGAGCTTGGCCGACT
TCGGCGACGAAGAGTTCCACAAGATGGTCTGCATCGAGCCGGGAATAGTC
GGCAAATTCCACAGCATTGCCCCCGGAGAAACCTTCTCCCTGAAGCAGAT
CATCACACCGTCGGCGTAACATTGCCCCCGGAGAAACCTTCTCCCTGAAG
CAGATCATCACACCGTCGGCGTAA
back to top