prot_C-linearis_contig10.532.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig10.532.1
Unique Name	prot_C-linearis_contig10.532.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	445

Homology

[Close]

BLAST of mRNA_C-linearis_contig10.532.1 vs. uniprot
Match: A0A6H5JSL0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL0_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 2.310e-41
Identity = 144/443 (32.51%), Postives = 192/443 (43.34%), Query Frame = 0

Query:    4 RFVQVGSGEMLRVVTRGSLIVDFHRRNSDDVCEDARVVLTGVSAVEGMGFNLLYLHALSETMAITIDPLGVHLLTNAVPPNGLTFPRNSSGASLYATRVQFTGTDFAASGVSSGSVYPHEPPPGDFPPDPSLLPFNGGGAGGGGAPSVMLPSTGDAGVGPENAPGDMLSTCADVVPDVFGFSPIDDDDVVPWNNSSDEPFCGAEGERFPPALVSVVPSTGIFPPTNTGVVTFLDGSVMQIPYTLEELRLVSGVLKIFSDEGDMEFVPSGNYGEYANGFLS-DAGAALLLGAFAAIAPKRRPFRVGPPTNAFEINHFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTSRA-GGRASEPGVTYHLDLCGAVTASLCGCVYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTE 444
            ++V VG G +L V   GS+ + F + + +       V LT VS VE + FNL   HA+S    I  D  G  L       NGL F R    ++ YA R+ +   D +A+ V                 DP+ LP             V  P +  A VG    P    S+   +V  +    P     VVP  +S                             +    V    G  +     L + +L+ G       +    F+P  +    A    S D GA   LGA AA+ P   PF +G    + +IN FHR   H CE LLR+TA+Q+GI LTG+LE C  C+  KG RA  SR  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRK  AL   K  + ++ +Y  G I+  RVD GTE
Sbjct:   12 KYVVVGDGRLLEVQAIGSINLSFFQEDENGEQTTMCVKLTDVSVVESLSFNLFSTHAVSLKQPILYDKRGATL------QNGLLFAREEKASAAYAIRLPY---DPSATFV-----------------DPAALPA-----------FVTAPDSAPA-VGSARFPSQKGSSAKSLV-SMLRIPPAGSASVVPSADSXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEFVCVGTFPGMDLGDTSVLTDEQLMDGYDDTPYQDFFPVFIPESDAANVAGVLDSIDGGADFDLGA-AALGPGASPFALGSTEKSVDINRFHRSLAHACESLLRQTAQQRGIVLTGKLEPCTDCMRAKGRRASASRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKPDALGATKRLLAEVGRYDLGRIECFRVDNGTE 414

[Close]

BLAST of mRNA_C-linearis_contig10.532.1 vs. uniprot
Match: A0A6H5KJH0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH0_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 3.280e-40
Identity = 145/443 (32.73%), Postives = 191/443 (43.12%), Query Frame = 0

Query:    4 RFVQVGSGEMLRVVTRGSLIVDFHRRNSDDVCEDARVVLTGVSAVEGMGFNLLYLHALSETMAITIDPLGVHLLTNAVPPNGLTFPRNSSGASLYATRVQFTGTDFAASGVSSGSVYPHEPPPGDFPPDPSLLPFNGGGAGGGGAPSVMLPSTGDAGVGPENAPGDMLSTCADVVPDVFGFSPIDDDDVVPWNNSSDEPFCGAEGERFPPALVSVVPSTGIFPPTNTGVVTFLDGSVMQIPYTLEELRLVSGVLKIFSDEGDMEFVPSGNYGEYANGFLS-DAGAALLLGAFAAIAPKRRPFRVGPPTNAFEINHFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTSRA-GGRASEPGVTYHLDLCGAVTASLCGCVYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTE 444
            R+V VG G +L+V   GS+ + F + + +       V LT VS VE + FNL   HA+S    I  D  G  L       N L F R    ++ YA R+ +   D +A+ V                 DP+ LP               + +       P++AP    +  A VVP      P                             V V    G FP    G     D SV      L + +L+ G       +    F+P  +    A    S D G+   LGA AA+ P   PF +G    + +IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG R    R  G RAS+P    HLDLCG +  S+ G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G I+  RVD GTE
Sbjct:   12 RYVVVGDGRLLKVQAIGSIKLSFFQEDENGEKTTMCVKLTDVSVVESLSFNLFSTHAVSRKQQILYDERGATL------QNRLLFAREKKASAAYAMRLPY---DPSATIV-----------------DPAALP-------------AFVTA-------PDSAPAVGSARSATVVPSSESVPPTGPTXXXXXXXXXXXXXXXXXXXXXASEFVCV----GTFPGMYLG-----DTSV------LTDEQLMDGYDDTPHQDFFPVFIPESDAANVAGVLDSIDGGSDFDLGA-AALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRGSVPRGPGARASKPLGCVHLDLCGPLMPSMGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTE 392

[Close]

BLAST of mRNA_C-linearis_contig10.532.1 vs. uniprot
Match: A0A6H5KBH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH5_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.410e-38
Identity = 144/444 (32.43%), Postives = 188/444 (42.34%), Query Frame = 0

Query:    4 RFVQVGSGEMLRVVTRGSLIVDFHRRNSDDVCEDARVVLTGVSAVEGMGFNLLYLHALSETMAITIDPLGVHLLTNAVPPNGLTFPRNSSGASLYATRVQFTGTDFAASGVSSGSVYPHEPPPGDFPPDPSLL-PFNGGGAGGGGAPSVMLPSTGDAGVGPENAPGDMLSTCADVVPDVFGFSPIDDDDVVPWNNSSDEPFCGAEGERFPPALVSVVPSTGIFPPTNTGVVTFLDGSVMQIPYTLEELRLVSGVLKIFSDEGDMEFVPSGNYGEYANGFLS-DAGAALLLGAFAAIAPKRRPFRVGPPTNAFEINHFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTSRA-GGRASEPGVTYHLDLCGAVTASLCGCVYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTE 444
            ++V  G G +L V   G + + F + + +       V LT VS VE + FNL   HA+S    I  D  G  L       NGL F R    ++ YA R+ +   D +A+ V S ++      P   P   S   P   GG+       + +PS G                                                           S     G FP  + G     D SV      L + +L+ G       +    F+P  +    A    S D GA   LGA AA+ P   PF +G    + +IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG RA   R  G RAS+P    HLDLCG +  SL G +YLLV VDS SR+   YGLRRKS AL   K  + D+ +Y  G I+  RVD GTE
Sbjct:   12 KYVVEGDGRLLEVQAIGFINLSFFQEDENGEKTTMCVKLTDVSVVESLSFNLFSTHAVSRKQQILHDERGATL------QNGLLFAREEKASAAYAMRLPY---DPSATIVDSAALPAFVTAPDSAPAVGSTRSPSQKGGSAESLVSVLRVPSAGSX--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEFVCVGTFPGMDLG-----DTSV------LTDEQLMDGYDDTPYQDFFPVFIPESDAANVAGVLDSIDGGADFDLGA-AALGPGASPFALGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLLVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTE 414

[Close]

BLAST of mRNA_C-linearis_contig10.532.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 5.850e-38
Identity = 143/444 (32.21%), Postives = 190/444 (42.79%), Query Frame = 0

Query:    4 RFVQVGSGEMLRVVTRGSLIVDFHRRNSDDVCEDARVVLTGVSAVEGMGFNLLYLHALSETMAITIDPLGVHLLTNAVPPNGLTFPRNSSGASLYATRVQFTGTDFAASGVSSGSVYPHEPPPGDFPPDPSLL-PFNGGGAGGGGAPSVMLPSTGDAGVGPENAPGDMLSTCADVVPDVFGFSPIDDDDVVPWNNSSDEPFCGAEGERFPPALVSVVPSTGIFPPTNTGVVTFLDGSVMQIPYTLEELRLVSGVLKIFSDEGDMEFVPSGNYGEYANGFLS-DAGAALLLGAFAAIAPKRRPFRVGPPTNAFEINHFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTSRA-GGRASEPGVTYHLDLCGAVTASLCGCVYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTE 444
            ++V VG G +L +   GS+ + F + + +       V LT VS VE + F+L   HA+S    I  D  G  L       NGL F R    ++ YA R+ +   D +A+ V S ++      P   P   S   P   GG+       + +PS G                                                           S     G FP  + G     D SV      L + +L+ G      ++    F+P  +    A    S D GA   LGA AA+ P   PF +G    + +IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG RA   R  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G I+  RVD GTE
Sbjct:   12 KYVVVGDGRLLELQAIGSINLSFFQEDDNGEKTTMCVKLTDVSVVESLSFSLFSAHAVSRKQQILHDERGATL------QNGLLFAREEKASAAYAMRLPY---DPSATIVDSAALPAFVTAPDSAPAVGSTRSPSQKGGSAESLVSVLRVPSAGSX--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEFVCVGTFPGMDLG-----DTSV------LTDEQLMDGYDDTPYEDFFPVFIPESDAANAAGVLDSIDGGADFDLGA-AALGPGASPFALGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTE 414

[Close]

BLAST of mRNA_C-linearis_contig10.532.1 vs. uniprot
Match: A0A6H5KIK4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIK4_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 1.670e-37
Identity = 83/162 (51.23%), Postives = 100/162 (61.73%), Query Frame = 0

Query:  284 DAGAALLLGAFAAIAPKRRPFRVGPPTNAFEINHFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTSRA-GGRASEPGVTYHLDLCGAVTASLCGCVYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTE 444
            D GA   LGA AA+ P   PF +G    + +IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG RA   R  G RAS+P    HLDLCG +  SLCG +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G ++  RVD GTE
Sbjct:   47 DGGADFDLGA-AALGPNASPFALGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLCGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRVECFRVDNGTE 207

[Close]

BLAST of mRNA_C-linearis_contig10.532.1 vs. uniprot
Match: A0A6H5J8D5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8D5_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 2.510e-37
Identity = 144/453 (31.79%), Postives = 190/453 (41.94%), Query Frame = 0

Query:    4 RFVQVGSGEMLRVVTRGSLIVDFHRRNSDDVCEDARVVLTGVSAVEGMGFNLLYLHALSETMAITIDPLGVHLLTNAVPPNGLTFPRNSSGASLYATRVQFTGTDFAASGVSSGSVYPHEPPPGDFPPDPSLLPFNGGGAGGGGAPSVMLPSTGDAGVGPENAPGDMLSTCADVVPDV----------FGFSPIDDDDVVPWNNSSDEPFCGAEGERFPPALVSVVPSTGIFPPTNTGVVTFLDGSVMQIPYTLEELRLVSGVLKIFSDEGDMEFVPSGNYGEYANGFLS-DAGAALLLGAFAAIAPKRRPFRVGPPTNAFEINHFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTSRA-GGRASEPGVTYHLDLCGAVTASLCGCVYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTE 444
            ++V VG G +L V   GS+ + F + + +       V LT VS VE + FNL   HA+S    I  D  G  L       NGL F R    ++ YA R+ +   D +A+ V                 DP+ LP             V  P +  A VG   +P     +   +V  +                                             S     G FP  + G     D SV      L + +L+ G       +    F+P  +    A    S D GA   LGA AA+ P   PF +G    + +IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG R    R  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G ++  RVD GTE
Sbjct:  314 KYVVVGDGRLLEVQAIGSINLSFFQVDENGEQTTMCVKLTDVSVVESLSFNLFSTHAVSLKQQILYDKRGATL------QNGLLFAREDKASAAYAIRLPY---DPSATIV-----------------DPAALPA-----------FVTAPDSAPA-VGSTRSPSQKGGSAESLVSVLRVPSAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASEFVCVGTFPGMDLG-----DTSV------LTDEQLMDGYDDTPYQDFFPVFIPESDAANVAGVLDSIDGGADFDLGA-AALGPGASPFALGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRGSVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRVECFRVDNGTE 716

[Close]

BLAST of mRNA_C-linearis_contig10.532.1 vs. uniprot
Match: A0A6H5JKY9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY9_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.220e-36
Identity = 147/483 (30.43%), Postives = 204/483 (42.24%), Query Frame = 0

Query:    5 FVQVGSGEMLRVVTRGSLIVDFHRRNSDDVCEDARVVLTGVSAVEGMGFNLLYLHALSETMAITIDPLGVHLLTNAVPPNGLTFPRNSSGASLYATRV--QFTGTDFAASGVSSGSVYPHEPPPG-------DFPPDPSLLPFNGGGAGGGGAPSVMLPSTGDAGVGPENAPGDMLSTCADVVPDVFGFSPIDDDDVVPWNNSSDEPFCGAEGER-FPPALVSVVPSTGIFPPTNTGVVTFLDGSVMQIPYTLEELRLVSGVLKIFSDEGDM---EFVPSGNYG-----------------------EYANGFLS------DAGAALLLGAFAAIAPKRRPFRVGPPTNAFEINHFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTSRAG-GRASEPGVTYHLDLCGAVTASLCGCVYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTE 444
            +++VG+G  LRV   GS+ + FH         D  V LT V  V G+ FNL  LH   +   I +D  GVHL         L+F  +  G SL ATR+   +   D   S V    V     PPG         PP PS +  +G G G    PS   PSTG AGV P                     S                        R F PAL + + S+ +  P+        +  +M +  + + L L+   + +F D G M   + VP G++                        +    F++      D G   L  A A  AP    F VG PT+  +IN FH  +GH+ E+L+RETAKQQG++L G L+ CV C+  KG RA   R G  RA+ P    H+D+ G  + +  G  YL++ VDS SR+  AYG+R KS  L   +  + DL   G G +   R+D   E
Sbjct:   13 YIRVGNGAHLRVECVGSVNLAFHMAGGRSREVDFCVQLTDVYVVPGISFNLFSLHQTQKKHRIMLDERGVHLFGGR-----LSFAYSDIGCSLSATRLPPSYRDGDVIPSTVVPPPVVRQASPPGVGTGLFAQNPPPPSQISGSGAGYG----PSSSFPSTGHAGVVPSTXXXXXXXXXXXXXXXXXXXSTTSXXXXXXXXXXXXXXXXXXTSIRDFQPALAAAIASSDVLSPSVVNPNVSREIEIMPLE-SQDNLPLMD--MSMFLDVGLMNGQDSVPPGDFCPDPLGVCESVKPPVAFAVMQDELDVLRDFVAECRVQQDVGPPSLSHALAIFAPGGPAFTVGKPTSTIDINLFHASTGHVNEFLMRETAKQQGVQLVGELQPCVGCIEAKGRRAPVPRRGVTRAAVPFGKVHIDITGPYSEAFDGSRYLIMFVDSASRWQRAYGMRAKSDTLTYTRRFLADL--NGNGPLGCFRMDNAGE 481

[Close]

BLAST of mRNA_C-linearis_contig10.532.1 vs. uniprot
Match: A0A6H5JQ01_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ01_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.640e-36
Identity = 141/452 (31.19%), Postives = 186/452 (41.15%), Query Frame = 0

Query:    4 RFVQVGSGEMLRVVTRGSLIVDFHRRNSDDVCEDARVVLTGVSAVEGMGFNLLYLHALSETMAITIDPLGVHLLTNAVPPNGLTFPRNSSGASLYATRVQFTGTDFAASGVSSGSVYPHEPPPGDFPPDPSLLPFNGGGAGGGGAPSVMLPSTGDAGVGPENAPGDMLSTCADVVPDV-----FGFSPIDDDDVVPWNNSSDEPFCGAEGERFPPALVSVVPSTGIFPPTNTGVVTFLDGSVMQIPYTLEELRLVSGVLKIFSDEGDMEF----VPSGNYGEYANGFLS-DAGAALLLGAFAAIAPKRRPFRVGPPTNAFEINHFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTSRA-GGRASEPGVTYHLDLCGAVTASLCGCVYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTE 444
            ++V VG G +L+V   GS+ + F +   + V     V LT VS VE + FNL   HA+S    I  D  GV L       NGL F R    ++ +A R+ +                           DPS +  +          S  LP+                    D VP                                          S     G FP  + G     D SV+    T E+L      + ++ D    +F    +P  +    A    S D G+   LGA AA+ P   PF +G    + +IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG RA   R  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G ++  RVD GTE
Sbjct:  297 QYVIVGDGRLLKVEAIGSINLIFFQEGDNGVPTTMYVKLTDVSVVESLSFNLFSTHAVSLRQRIIHDERGVTLR------NGLLFAREEKASAAHAMRMPY---------------------------DPSAIVVD----------SAALPA---------------FVKSPDXVPSAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGFECVGTFPGMDLG-----DTSVL----TDEQL------MDVYDDTPYQDFFPVVIPESDAANVAGVLDSIDGGSDFDLGA-AALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKKLLADVGRYYLGRVECFRVDNGTE 674

[Close]

BLAST of mRNA_C-linearis_contig10.532.1 vs. uniprot
Match: A0A6H5JQ51_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ51_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 3.950e-36
Identity = 82/162 (50.62%), Postives = 100/162 (61.73%), Query Frame = 0

Query:  284 DAGAALLLGAFAAIAPKRRPFRVGPPTNAFEINHFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTSRA-GGRASEPGVTYHLDLCGAVTASLCGCVYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTE 444
            D GA   LGA AA+ P   PF +G    + +I+ FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG RA   R  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRKS AL   K  + D+ +YG G ++  RVD GTE
Sbjct:  105 DGGADFYLGA-AALGPGASPFALGSTEKSVDIDRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYGLGRVECFRVDNGTE 265

[Close]

BLAST of mRNA_C-linearis_contig10.532.1 vs. uniprot
Match: A0A6H5KAL3_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL3_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 9.690e-36
Identity = 86/179 (48.04%), Postives = 106/179 (59.22%), Query Frame = 0

Query:  268 FVPSGNYGEYANGFLS-DAGAALLLGAFAAIAPKRRPFRVGPPTNAFEINHFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTSRA-GGRASEPGVTYHLDLCGAVTASLCGCVYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTE 444
            F+P  +    A  F S D GA   LGA AA+ P   PF +G    + +IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG R    R  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G +++ RVD GTE
Sbjct:   30 FIPECDAANVAGVFDSIDGGADFDLGA-AALGPGASPFALGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRGSVPRGPGARASKPLGRIHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRVESSRVDNGTE 207

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig10.532.1 vs. uniprot

BLAST of mRNA_C-linearis_contig10.532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JSL0_9PHAE	2.310e-41	32.51	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KJH0_9PHAE	3.280e-40	32.73	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KBH5_9PHAE	1.410e-38	32.43	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JG40_9PHAE	5.850e-38	32.21	Integrase catalytic domain-containing protein n=3 ...	[more]
A0A6H5KIK4_9PHAE	1.670e-37	51.23	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5J8D5_9PHAE	2.510e-37	31.79	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JKY9_9PHAE	1.220e-36	30.43	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JQ01_9PHAE	2.640e-36	31.19	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JQ51_9PHAE	3.950e-36	50.62	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KAL3_9PHAE	9.690e-36	48.04	Integrase catalytic domain-containing protein n=2 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 364..444 e-value: 2.8E-6 score: 28.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 367..444 score: 11.666
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 367..444

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig10	contig	C-linearis_contig10:2013946..2015280 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig10.532.1	mRNA_C-linearis_contig10.532.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig10 2013925..2016156 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig10.532.1 ID=prot_C-linearis_contig10.532.1|Name=mRNA_C-linearis_contig10.532.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=445bp
MPLRFVQVGSGEMLRVVTRGSLIVDFHRRNSDDVCEDARVVLTGVSAVEG
MGFNLLYLHALSETMAITIDPLGVHLLTNAVPPNGLTFPRNSSGASLYAT
RVQFTGTDFAASGVSSGSVYPHEPPPGDFPPDPSLLPFNGGGAGGGGAPS
VMLPSTGDAGVGPENAPGDMLSTCADVVPDVFGFSPIDDDDVVPWNNSSD
EPFCGAEGERFPPALVSVVPSTGIFPPTNTGVVTFLDGSVMQIPYTLEEL
RLVSGVLKIFSDEGDMEFVPSGNYGEYANGFLSDAGAALLLGAFAAIAPK
RRPFRVGPPTNAFEINHFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVP
CVLVKGARAHTSRAGGRASEPGVTYHLDLCGAVTASLCGCVYLLVVVDSF
SRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR001584	Integrase_cat-core
IPR012337	RNaseH-like_sf