prot_C-linearis_contig10.511.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.511.1
Unique Nameprot_C-linearis_contig10.511.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length535
Homology
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match: D7FZX3_ECTSI (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX3_ECTSI)

HSP 1 Score: 932 bits (2409), Expect = 0.000e+0
Identity = 456/494 (92.31%), Postives = 465/494 (94.13%), Query Frame = 0
Query:   41 AAKEAKEETPEPARVYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAYSRS 534
            AA  AKEE PEP RVYGGLKDQDRIFTNLYGEQDWRVGDA+KRGDWH+TK+IMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAY+         +G LGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFA FGRKNN GTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDI+DCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQML+KMEKGEADTREIPMLEEISR+IEGHTICALGDAAAWPVQ         GLIRRFQPVIEERIAGGPE YQ+EK KYFQ AWSGEPFKNK WVDQHGDGKAYSRS
Sbjct:   36 AAPGAKEEAPEPPRVYGGLKDQDRIFTNLYGEQDWRVGDALKRGDWHQTKEIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQ---------KGFLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFASFGRKNNHGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDINDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLVKMEKGEADTREIPMLEEISRSIEGHTICALGDAAAWPVQ---------GLIRRFQPVIEERIAGGPEQYQSEKGKYFQEAWSGEPFKNKAWVDQHGDGKAYSRS 511          
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match: A0A835ZC73_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC73_9STRA)

HSP 1 Score: 819 bits (2116), Expect = 3.360e-296
Identity = 411/509 (80.75%), Postives = 439/509 (86.25%), Query Frame = 0
Query:   23 RAAVRSVAAVGRARSMSAAAKEAKEETPEPARVYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAY 531
            RAA RS  AVG +R++S AA EA    P   RVYGGLKDQDRIFTNLYGEQDWR+  A KRGDW+ TK+IMW GPDWIV EMK SGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY A         G LG NACGSGYDFD+YLHRGAGAYICGEETALIESLEGRQGKPR+KPPFPANVGVFGCPTTVTNVET+AVAPTILRRG +WFAGFGRKNN+GTKLFAISGHVN+P VVEEEMSI L++LL++HCGGVRGGWD LQAVIPGGSSVPVLDI+DC DV+MDFDDLK  GSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGT WLEQ+L++ME GEAD REIPMLEEI+R IEGHTICALGDAAAWPVQ         GLIRRFQ V+E+RI     A   +  +YFQ AWSG+PF N DW   HGDGK Y
Sbjct:   16 RAAARS-RAVG-SRTLSTAAPEA----PPLTRVYGGLKDQDRIFTNLYGEQDWRIKAAEKRGDWYMTKEIMWQGPDWIVNEMKASGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYLA---------GKLGANACGSGYDFDIYLHRGAGAYICGEETALIESLEGRQGKPRMKPPFPANVGVFGCPTTVTNVETIAVAPTILRRGGAWFAGFGRKNNAGTKLFAISGHVNSPKVVEEEMSIPLKDLLERHCGGVRGGWDQLQAVIPGGSSVPVLDINDCKDVLMDFDDLKSRGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTNWLEQLLVRMESGEADKREIPMLEEITRQIEGHTICALGDAAAWPVQ---------GLIRRFQHVVEDRI---DNADTFDPAQYFQHAWSGQPFTNADWTKAHGDGKTY 497          
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match: A0A7S1TYU1_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYU1_9STRA)

HSP 1 Score: 812 bits (2097), Expect = 1.150e-293
Identity = 400/499 (80.16%), Postives = 436/499 (87.37%), Query Frame = 0
Query:   35 ARSMSAAAKEAKEET-PEPARVYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAYS 532
            A + +AAA+   +E  P+  +VYGGLKDQDRIFTN+YGEQDWR+ DAMKRGDWH+TKDI+ MGPDWIVQE+KDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLVVNADESEPGTCKDREIMRKDPHKL+EGCL+AGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY          +G++G+NACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCP+TVTNVETVAVAPTILRRG+SWFAGFGRK NSGTKLF ISGHVNNP VVEEEMSI LRELL++HCGGVRGGW NLQAVIPGGSSVPVLD +DC  VMMDFDDLK  GSGLGTAAVTVMDKSVDM+AAIRRLAHFYKHESCGQCTPCREGTGWLE++L++ME G AD  EI MLEEISR IEGHTICALGDAAAWPVQ         GLIRRFQ VIE+RI   PE + A  D +FQ AWSGEPF N +W + HG GK ++
Sbjct:    4 AATAAAAARPLSDEAEPQLTQVYGGLKDQDRIFTNIYGEQDWRIKDAMKRGDWHRTKDILCMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKASDGRPSFLVVNADESEPGTCKDREIMRKDPHKLIEGCLIAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYA---------KGMIGENACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGSSWFAGFGRKGNSGTKLFGISGHVNNPKVVEEEMSIDLRELLERHCGGVRGGWSNLQAVIPGGSSVPVLDENDCQSVMMDFDDLKAKGSGLGTAAVTVMDKSVDMVAAIRRLAHFYKHESCGQCTPCREGTGWLEEVLVRMEAGNADHGEIAMLEEISRQIEGHTICALGDAAAWPVQ---------GLIRRFQHVIEDRI-DNPEGFDA--DAHFQRAWSGEPFANGEWANAHGMGKTFA 481          
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match: A0A7S3MFV3_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFV3_9STRA)

HSP 1 Score: 811 bits (2094), Expect = 9.050e-293
Identity = 398/484 (82.23%), Postives = 426/484 (88.02%), Query Frame = 0
Query:   51 EPA--RVYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAYS 532
            EPA  RVYGGLKDQDRIFTN+YGEQDWR+  AMKRGDW +T++IM  GPDWIV E+K SGLRGRGGAGFPSGLKWSFMPK +DGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAG+AMRARA YIYIRGEYFNEAVV+ EAIHEAY A         G LGKNACGSGYD+D+YLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPAN+G+FGCPTTVTNVETVAV+PTI RRGASWFAG GR NN+GTKLF ISGHVNNPIVVEEEMSITLRELL++HCGGVRGGW NLQAVIPGGSSVPVLD +DC +VMMDFDDLK AGS LGTAAVTVMDKSVDMIAAIRRL+HFY HESCGQCTPCREGTGW+E +L KME G+AD REIPMLEEISRAIEGHTICALGDAAAWPVQ         GLIRRF+ V+E+RI   PE Y AEKDKYFQ AWSGE FKN  W DQHGDGK ++
Sbjct:   41 EPALTRVYGGLKDQDRIFTNIYGEQDWRLNAAMKRGDWFRTREIMNQGPDWIVNELKASGLRGRGGAGFPSGLKWSFMPKKSDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGFAMRARAGYIYIRGEYFNEAVVLQEAIHEAYAA---------GFLGKNACGSGYDYDLYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANIGLFGCPTTVTNVETVAVSPTIFRRGASWFAGMGRPNNTGTKLFGISGHVNNPIVVEEEMSITLRELLERHCGGVRGGWSNLQAVIPGGSSVPVLDENDCQNVMMDFDDLKAAGSALGTAAVTVMDKSVDMIAAIRRLSHFYTHESCGQCTPCREGTGWMETILNKMEHGDADLREIPMLEEISRAIEGHTICALGDAAAWPVQ---------GLIRRFKYVMEDRI-NHPEKYAAEKDKYFQRAWSGEQFKNLKWADQHGDGKNFT 505          
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match: F0Y5S2_AURAN (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y5S2_AURAN)

HSP 1 Score: 798 bits (2062), Expect = 1.560e-288
Identity = 388/471 (82.38%), Postives = 417/471 (88.54%), Query Frame = 0
Query:   59 LKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGK 529
            +KDQDRIFTNLYGE+DWR+GDA KRGDWH TKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLV+NADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARA YIYIRGEYFNEA+VMDEAIHEAY A         GL+GKNACGSGYDFD+YLHRGAGAY+CGEETALIESLEG+QGKPRLKPPFPANVGVFGCPTTVTNVET+AVAPTILRRGASWF GFGRKNN+GTKLFAISGHVNNPIVVEEEMSI  REL+DKHCGGVRGGW+ LQAVIPGGSSVPVL I++C + +MDFDDLK  GSGLGTAAVTVMD +VDMIAAIRRLAHFY+HESCGQCTPCREGTGWLE +L +ME G+AD REI ML+EISR IEGHTICALGDAAAWPVQ         GLIRRFQPVIEERIA  P+ +  E   +FQ AWSGE FKN +W  + G GK
Sbjct:    1 VKDQDRIFTNLYGEEDWRLGDAKKRGDWHMTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKASDGRPSFLVINADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARACYIYIRGEYFNEAMVMDEAIHEAYTA---------GLIGKNACGSGYDFDMYLHRGAGAYVCGEETALIESLEGKQGKPRLKPPFPANVGVFGCPTTVTNVETIAVAPTILRRGASWFTGFGRKNNAGTKLFAISGHVNNPIVVEEEMSIPFRELIDKHCGGVRGGWNKLQAVIPGGSSVPVLPIEECEEALMDFDDLKARGSGLGTAAVTVMDDTVDMIAAIRRLAHFYRHESCGQCTPCREGTGWLETILERMEVGDADVREIGMLDEISRQIEGHTICALGDAAAWPVQ---------GLIRRFQPVIEERIAD-PQGFDFEA--HFQHAWSGEKFKNAEWTKEFGGGK 450          
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match: A0A7S2V010_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V010_9STRA)

HSP 1 Score: 793 bits (2047), Expect = 1.070e-285
Identity = 385/484 (79.55%), Postives = 422/484 (87.19%), Query Frame = 0
Query:   48 ETPEPARVYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAY 531
            E P  ARVYGGL+DQDRIFTNLYGEQD+R+GDA+KRGDW++TKD++W GPDWIV+E+K SGLRGRGGAGFPSGLKWSFMPK TDGRP FLVVNADESEPGTCKDREIMRKDPHKLVEGCL+AG+AMRARAAYIYIRGEYFNEA ++DEAIHEAYEA         G LG +ACGSGYDFDVYLHRGAGAYICGEETALIESLEG+QGKPRLKPPFPAN+GVFGCP+TVTNVETVAV+PTILRRGA WFAGFGR NN+GTKLF ISGHVNNPI VEEEMSI L++LL++HC GVRGGWDNLQAVIPGGSSVPVL+  D ++ +MDFDDLK  GSGLGTAAVTVMDKSVDM+AAIRRLAHFYKHESCGQCTPCREGT WLE++L++MEKG+AD REI MLEEISR IEGHTICALGDAAAWPVQ         GLI+ FQ VIEERI   PE +  E   +FQ AWSG  F NKDWV  HG GKAY
Sbjct:   39 EDPALARVYGGLQDQDRIFTNLYGEQDFRLGDAVKRGDWYRTKDLLWQGPDWIVEEIKKSGLRGRGGAGFPSGLKWSFMPKKTDGRPQFLVVNADESEPGTCKDREIMRKDPHKLVEGCLIAGFAMRARAAYIYIRGEYFNEAAILDEAIHEAYEA---------GYLGADACGSGYDFDVYLHRGAGAYICGEETALIESLEGKQGKPRLKPPFPANIGVFGCPSTVTNVETVAVSPTILRRGADWFAGFGRPNNAGTKLFCISGHVNNPITVEEEMSIPLKDLLERHCKGVRGGWDNLQAVIPGGSSVPVLNFQDSSEALMDFDDLKARGSGLGTAAVTVMDKSVDMVAAIRRLAHFYKHESCGQCTPCREGTPWLEKILLRMEKGDADKREIAMLEEISRQIEGHTICALGDAAAWPVQ---------GLIKSFQHVIEERI-DNPEGFDPEA--HFQKAWSGSEFVNKDWVKAHGGGKAY 501          
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match: A0A7S3K1X1_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1X1_9STRA)

HSP 1 Score: 791 bits (2043), Expect = 2.300e-285
Identity = 383/475 (80.63%), Postives = 419/475 (88.21%), Query Frame = 0
Query:   54 RVYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDG 528
            R YGGLKD DRIFTN+ GEQDWR+ DA+KRGDW+KTK+IMWMGPDWIVQE+KDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLV+NADESEPGTCKDREIMRKDPHKL+EG LLAGYAMRARA YIYIRGEYFNEAVV+DEAIHEAY+A         GLLGKNACGSGYD+DVYLHRGAGAYICGEETALIESLEG+QGKPRLKPPFPANVGVFGCP+TVTNVETVAVAPTILRRG SWFA FGR+ NSGTKLFAISGHVNNP VVEEEMSI +REL++KHCGGVRGGWDNLQAVIPGGSSVP+L +D+C++ +MDFDDLK  GSGLGTAAVTVMDKSVDMIAAIRRL+HFY HESCGQCTPCREGT WLEQML++MEKG+AD REI MLEEI+R IEGHTICALGDAAAWPVQ         GLIRRF+ V+EERI   P A+  +    FQ AWSG+PF N +W  Q+G G
Sbjct:   27 RNYGGLKDSDRIFTNITGEQDWRLKDALKRGDWYKTKEIMWMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKKSDGRPSFLVINADESEPGTCKDREIMRKDPHKLIEGTLLAGYAMRARACYIYIRGEYFNEAVVLDEAIHEAYQA---------GLLGKNACGSGYDYDVYLHRGAGAYICGEETALIESLEGKQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGSWFASFGRERNSGTKLFAISGHVNNPCVVEEEMSIPMRELIEKHCGGVRGGWDNLQAVIPGGSSVPILPLDECSEALMDFDDLKSRGSGLGTAAVTVMDKSVDMIAAIRRLSHFYSHESCGQCTPCREGTSWLEQMLMRMEKGQADKREIDMLEEITRQIEGHTICALGDAAAWPVQ---------GLIRRFKNVMEERI-NDPTAF--DHQAAFQKAWSGKPFNNHEWTQQYGAG 480          
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match: A0A7S2B9D4_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9D4_9STRA)

HSP 1 Score: 789 bits (2037), Expect = 3.420e-284
Identity = 378/477 (79.25%), Postives = 420/477 (88.05%), Query Frame = 0
Query:   55 VYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAY 531
             YGGLKD DRIFTN+YGE+DWR+ DAM RGDW++TKDIMWMGPDW+VQE+KDSGLRGRGGAGFPSGLKWSFMPK TDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY A         G LGKNACGSGYDFDVYLHRGAGAY+CGEETALIESLEG+QGKPRLKPPFPANVGVFGCP+TVTNVET+AVAPTI RRGA+WFA FGRKNN+GTKLF ISGHVNNPIVVEEEMSI+L+ELL+KHCGGVRGGW+NLQAVIPGGSSVPV++ +  +  +MDFDDLK  GS LGTAAVTVMDKSVDM+AAIRRLAHFY+HESCGQCTPCREGTGWLE++L++MEKG+AD REIPMLEEI+R IEGHTICALGDAAAWPVQ         GLI++F+P +E R+    +    + D +FQ AWSG  F NKD+ ++ GDGK Y
Sbjct:   46 TYGGLKDTDRIFTNIYGEKDWRLKDAMLRGDWYRTKDIMWMGPDWMVQEIKDSGLRGRGGAGFPSGLKWSFMPKATDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYAA---------GFLGKNACGSGYDFDVYLHRGAGAYVCGEETALIESLEGKQGKPRLKPPFPANVGVFGCPSTVTNVETIAVAPTIFRRGANWFASFGRKNNTGTKLFGISGHVNNPIVVEEEMSISLQELLEKHCGGVRGGWNNLQAVIPGGSSVPVMNFEQSSVALMDFDDLKAHGSALGTAAVTVMDKSVDMVAAIRRLAHFYRHESCGQCTPCREGTGWLEEILVRMEKGDADVREIPMLEEITRQIEGHTICALGDAAAWPVQ---------GLIKQFKPEMEARLT---DFDSFDPDAHFQRAWSGSEFSNKDYAEKFGDGKTY 501          
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match: B8CBG7_THAPS (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=3 Tax=Ochrophyta TaxID=2696291 RepID=B8CBG7_THAPS)

HSP 1 Score: 779 bits (2012), Expect = 1.950e-280
Identity = 376/477 (78.83%), Postives = 414/477 (86.79%), Query Frame = 0
Query:   55 VYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAY 531
             YGGL DQDRIFTNLYGEQDWR+ DA+KRGD+H TK++MWMGPDWIVQE+KDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLVVNADESEPGTCKDREIMRKDPHKL+EGCL+AGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY A         GL+GKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPA VG+FGCP+TVTNVETVAV+PTILRRGASWFAGFG  NN GTKLFAISGHV NPIVVEE MSI L+EL++KHCGG+R GWD LQA IPGGSSVPVL+   C + +M+FDDL+  GSGLGTAAVT+ D SVDM+ AIRRL+HFYKHESCGQCTPCREGT WLE +LI+MEKG+AD REIPMLEEISR IEGHTICALGDAAAWPVQ         GL+R F+  IE+RI   P ++ AEK   FQ AWSG+PF N +WVD+HGDG +Y
Sbjct:   40 AYGGLSDQDRIFTNLYGEQDWRLKDALKRGDYHLTKEMMWMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKESDGRPSFLVVNADESEPGTCKDREIMRKDPHKLIEGCLIAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYAA---------GLIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPAGVGLFGCPSTVTNVETVAVSPTILRRGASWFAGFGNPNNRGTKLFAISGHVKNPIVVEESMSIPLQELIEKHCGGMRNGWDTLQACIPGGSSVPVLNKAQCDEALMEFDDLRAKGSGLGTAAVTMFDNSVDMVGAIRRLSHFYKHESCGQCTPCREGTSWLEDILIRMEKGDADKREIPMLEEISRQIEGHTICALGDAAAWPVQ---------GLLRHFKKDIEDRI-DDPSSFDAEKA--FQYAWSGDPFDNSEWVDKHGDGMSY 495          
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Match: A0A7S3L3M6_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3M6_9STRA)

HSP 1 Score: 778 bits (2009), Expect = 4.470e-280
Identity = 382/488 (78.28%), Postives = 418/488 (85.66%), Query Frame = 0
Query:   52 PARVYGG-----LKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGRKNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISRAIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQAEKDKYFQGAWSGEPFKNKDWVDQHGDGKAYSRS 534
            PA VY       LKD+DRIFTNLYGEQDWR+ DAMKRGD+H TK+IMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAY A         GL+GKNACGSGYDFD+YLHRGAGAYICGEETALIESLEG+QGKPRLKPPFPA VGVFGCP+TVTNVET+AV+PTILRRGASWFA FGR+NN GTKLFAISGHV +P VVEE MSI LR+L++KHCGG+R GWD++QA IPGGSSVPVL+   C + +MDFDDL+  GSGLGTAAVT+ DKSVDM+AAIRRL+HFYKHESCGQCTPCREGTGWLE +LI+MEKG+AD REIPMLEEISR IEGHTICALGDAAAWPVQ         GLIR F+  IE+RI   P ++  E    FQ AWSG+PF N +W  QHG GK Y ++
Sbjct:   27 PAEVYVSSDFSFLKDEDRIFTNLYGEQDWRLKDAMKRGDYHMTKEIMWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYSA---------GLIGKNACGSGYDFDIYLHRGAGAYICGEETALIESLEGKQGKPRLKPPFPAGVGVFGCPSTVTNVETIAVSPTILRRGASWFASFGRENNRGTKLFAISGHVKSPKVVEESMSIPLRDLIEKHCGGMRNGWDSVQACIPGGSSVPVLNKALCDEALMDFDDLRSKGSGLGTAAVTMFDKSVDMVAAIRRLSHFYKHESCGQCTPCREGTGWLEDVLIRMEKGDADKREIPMLEEISRQIEGHTICALGDAAAWPVQ---------GLIRHFKKDIEDRI-DNPASFDHEAA--FQKAWSGDPFDNAEWTKQHGGGKTYVKN 493          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZX3_ECTSI0.000e+092.31NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A835ZC73_9STRA3.360e-29680.75NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S1TYU1_9STRA1.150e-29380.16NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S3MFV3_9STRA9.050e-29382.23NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
F0Y5S2_AURAN1.560e-28882.38NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S2V010_9STRA1.070e-28579.55NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S3K1X1_9STRA2.300e-28580.63NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S2B9D4_9STRA3.420e-28479.25NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
B8CBG7_THAPS1.950e-28078.83NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S3L3M6_9STRA4.470e-28078.28NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019575NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainSMARTSM00928NADH_4Fe_4S_2coord: 397..442
e-value: 5.2E-23
score: 92.4
IPR019575NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainPFAMPF10589NADH_4Fe-4Scoord: 399..470
e-value: 2.9E-25
score: 88.2
NoneNo IPR availableGENE3D3.10.20.600coord: 298..394
e-value: 8.9E-39
score: 133.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..534
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSUPERFAMILY142984Nqo1 middle domain-likecoord: 307..392
IPR011538NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainPFAMPF01512Complex1_51Kcoord: 104..283
e-value: 3.9E-48
score: 163.2
IPR019554Soluble ligand binding domainPFAMPF10531SLBBcoord: 309..359
e-value: 1.1E-7
score: 31.6
IPR037207NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilyGENE3D1.20.1440.230coord: 395..504
e-value: 4.7E-29
score: 102.2
IPR037207NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilySUPERFAMILY140490Nqo1C-terminal domain-likecoord: 393..492
IPR011537NADH ubiquinone oxidoreductase, F subunitTIGRFAMTIGR01959TIGR01959coord: 65..471
e-value: 6.3E-182
score: 602.5
IPR011537NADH ubiquinone oxidoreductase, F subunitPANTHERPTHR11780NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1coord: 41..494
IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilyGENE3D3.40.50.11540coord: 109..296
e-value: 4.6E-78
score: 262.9
IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilySUPERFAMILY142019Nqo1 FMN-binding domain-likecoord: 61..306
IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved sitePROSITEPS00645COMPLEX1_51K_2coord: 410..421
IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved sitePROSITEPS00644COMPLEX1_51K_1coord: 233..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1622981..1631527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.511.1mRNA_C-linearis_contig10.511.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1622968..1632685 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.511.1 ID=prot_C-linearis_contig10.511.1|Name=mRNA_C-linearis_contig10.511.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=535bp
MMYKAAARAAAAATASASAPSARAAVRSVAAVGRARSMSAAAKEAKEETP
EPARVYGGLKDQDRIFTNLYGEQDWRVGDAMKRGDWHKTKDIMWMGPDWI
VQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCK
DREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEA
YEASPFRLLAKRGLLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLE
GRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFAGFGR
KNNSGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAV
IPGGSSVPVLDIDDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAI
RRLAHFYKHESCGQCTPCREGTGWLEQMLIKMEKGEADTREIPMLEEISR
AIEGHTICALGDAAAWPVQACKFRPRRGGLIRRFQPVIEERIAGGPEAYQ
AEKDKYFQGAWSGEPFKNKDWVDQHGDGKAYSRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019575Nuop51_4Fe4S-bd
IPR011538Nuo51_FMN-bd
IPR019554Soluble_ligand-bd
IPR037207Nuop51_4Fe4S-bd_sf
IPR011537NADH-UbQ_OxRdtase_suF
IPR037225Nuo51_FMN-bd_sf
IPR001949NADH-UbQ_OxRdtase_51kDa_CS