prot_C-linearis_contig10.507.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.507.1
Unique Nameprot_C-linearis_contig10.507.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length287
Homology
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BLAST of mRNA_C-linearis_contig10.507.1 vs. uniprot
Match: A0A6H5KJ39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ39_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 1.440e-121
Identity = 179/263 (68.06%), Postives = 212/263 (80.61%), Query Frame = 0 
Query:    4 AKRRSSATIRTVLAVCG-LHLLASIPTANA-TTAGYGARRTLYYEDSDCRLETFREFSYEAISIEMDGAASQVGFGECYARGSTGATTTCNPTNGTSTVETYLDTSCSALLYTSAEDAECTSLRVDGETCPPGGPGSATTDCVATEPFDSMQPGPFNLIGSPYKDMHCLERTGGDHVVSGHAFGVGSGECSESPLVRGPRYALTECQAD-HTVYAQVFGPDDATCADDMRLEMVMFPRAASDDRSGGMCALGHFEDGSEVYYR 263
            AKR++SA I T +AVC  L LL  IPTA A  T+  GARRTLYY+D+ CRLETFREF+YE +SI+ DG+ SQVGFGECYARGSTGA TTC+PT+GTSTVETYLDT+C   LY+S +  EC  LRVDGETCPPGGPGS  +DC++ +P D++ PG FNLIGSPY D  C ERTGGDH+VSG+AFG+G+GECS SPLVRGPRYALTEC  + + V AQVF P+D+TC+ D RLEM+MF RA  +D +GGMCALGHFEDG E YYR
Sbjct:    7 AKRKASAIISTTVAVCCYLQLLCKIPTAMAGATSQTGARRTLYYQDTGCRLETFREFAYEVMSIDSDGSESQVGFGECYARGSTGAITTCDPTDGTSTVETYLDTACQIHLYSSKDSPECVDLRVDGETCPPGGPGSMASDCISEDPIDTITPGTFNLIGSPYSDPFCEERTGGDHIVSGNAFGIGNGECSLSPLVRGPRYALTECDTETNLVLAQVFSPEDSTCSGDTRLEMIMFARAVDNDTNGGMCALGHFEDGHEEYYR 269
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BLAST of mRNA_C-linearis_contig10.507.1 vs. uniprot
Match: D7FZX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX6_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 2.550e-88
Identity = 135/198 (68.18%), Postives = 157/198 (79.29%), Query Frame = 0 
Query:    4 AKRRSSATIRTVLAVCG-LHLLASIPTANA-TTAGYGARRTLYYEDSDCRLETFREFSYEAISIEMDGAASQVGFGECYARGSTGATTTCNPTNGTSTVETYLDTSCSALLYTSAEDAECTSLRVDGETCPPGGPGSATTDCVATEPFDSMQPGPFNLIGSPYKDMHCLERTGGDHVVSGHAFGVGSGECSESPLVRG 199
            AKRR+S  I T +A C  L LL  IPTA A  TA  GARRTLYY+D+ CRLETFREF+YE +SIE DG+ SQVGFGECYARGSTGA TTC+PT+GTSTVETYLDT+C   LY+S +  EC  LRVDGETCPPGGPGS  +DC++ +P D++ PG FNLIGSPY D  C ERTGGDH+VSG+AFG+G+GECS SPL  G
Sbjct:    7 AKRRASVIISTTVAACWCLQLLCKIPTATAGATAQTGARRTLYYQDTGCRLETFREFAYEVMSIESDGSDSQVGFGECYARGSTGAITTCDPTDGTSTVETYLDTACQIHLYSSKDSLECVDLRVDGETCPPGGPGSMASDCISEDPIDTITPGTFNLIGSPYSDPFCEERTGGDHIVSGNAFGIGNGECSLSPLGEG 204
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJ39_9PHAE1.440e-12168.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZX6_ECTSI2.550e-8868.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..287
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..32
score: 0.655

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1571776..1576824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.507.1mRNA_C-linearis_contig10.507.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1571776..1576824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.507.1 ID=prot_C-linearis_contig10.507.1|Name=mRNA_C-linearis_contig10.507.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=287bp
MQEAKRRSSATIRTVLAVCGLHLLASIPTANATTAGYGARRTLYYEDSDC
RLETFREFSYEAISIEMDGAASQVGFGECYARGSTGATTTCNPTNGTSTV
ETYLDTSCSALLYTSAEDAECTSLRVDGETCPPGGPGSATTDCVATEPFD
SMQPGPFNLIGSPYKDMHCLERTGGDHVVSGHAFGVGSGECSESPLVRGP
RYALTECQADHTVYAQVFGPDDATCADDMRLEMVMFPRAASDDRSGGMCA
LGHFEDGSEVYYRRAQPRRRRRPRRSAKRRHRRRQST
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