prot_C-linearis_contig10.505.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.505.1
Unique Nameprot_C-linearis_contig10.505.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length210
Homology
BLAST of mRNA_C-linearis_contig10.505.1 vs. uniprot
Match: D7G5K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K4_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 1.920e-39
Identity = 90/219 (41.10%), Postives = 129/219 (58.90%), Query Frame = 0
Query:    1 MATSLLDAAAQAEELAGKILSGAADAVEFVAEL-GVELPFIGPIFKSIKNIREKVEKVQSNREELIDLHERCSRITASFIVKCKT---ELSGFDVAPLESLVQDVYTFVTGCQQKSVGAEMWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEI-----QQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMN 210
            M T+L DAA +A  LA K+ S A D + FV    G ELP +G + K++  +RE VE VQ NR+EL  L +RC+ +TAS IVK +      SG DV PL+  V     F   C+++ +  E+ ++  ++ E+A L+ RID+L  D+GL GIA ++  V ++     +Q    QA  Q  +L N   ++DRLP P  K A +P+GT   K WHVERRHVM+
Sbjct:    1 MVTTLSDAAVEAANLALKMGSTAVDMISFVHRGDGGELPVVGTVLKTLTAMRETVETVQQNRDELAALEKRCTYMTASVIVKFRQIPQPGSGLDVTPLKDCVVVAEKFAERCKKRRMRWEIVKAFSVKDELATLNARIDRLVGDLGLAGIATVLGEVADLKGMMLEQMVSDQAAAQKELLANQEIVIDRLPKPPTKKADIPQGTPMRKSWHVERRHVMD 219          
BLAST of mRNA_C-linearis_contig10.505.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 1.450e-36
Identity = 86/220 (39.09%), Postives = 126/220 (57.27%), Query Frame = 0
Query:    1 MATSLLDAAAQAEELAGKILSGAADAVEFVAELGVELPFIGPIFKSIKNIREKVEKVQSNREELIDLHERCSRITASFIVKCKTELSGFDVAPLESLVQDVYTFVTGCQQKSVGAEMWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEI------------QQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHV 208
            MA  + DA  +  ++A K+ S AAD ++FVA+LG ELP + P+ ++++ IREKVE V+ N E+L  LH+RC+ ITA FIVKC+   +  DVAPLE  V  V  FV   +++   + + ++   +G+I  L  R+  L  D+ L GIA + K +               ++  + Q      +L  T  IL +LP P  K+A VPKGT  HK WHVERR+V
Sbjct:    1 MAAYVADATGEVAKIASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYTELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNV 220          
BLAST of mRNA_C-linearis_contig10.505.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 1.960e-36
Identity = 86/209 (41.15%), Postives = 123/209 (58.85%), Query Frame = 0
Query:    1 MATSLLDAAAQAEELAGKILSGAADAVEFVAELGVELPFIGPIFKSIKNIREKVEKVQSNREELIDLHERCSRITASFIVKCKTELSGFDVAPLESLVQDVYTFVTGCQQKSVGAEMWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVM 209
            M   + D+AA+A  LA +I S  +DAV    +LG ELP I P+FK++K IR  VE V++NREEL  L +RC+ ITA F+VKC+   S  DVAPL+  V+    F   C ++   + + ++   + EIAGL+  +D+LT+D+GL GIA++  +VD++++            L      L+ LP    KLA VP G    K WHVERRH M
Sbjct:    1 MVADISDSAAEAARLALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIESEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKK-----------TLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAM 198          
BLAST of mRNA_C-linearis_contig10.505.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 2.140e-28
Identity = 78/221 (35.29%), Postives = 119/221 (53.85%), Query Frame = 0
Query:    1 MATSLLDAAAQAEELAGKILSGAADAVEFVAELGVELPF-------IGPIFKSIKNIREKVEKVQSNREELIDLHERCSRITASFIVKCK-TELSGFDVAPLESLVQDVYTFVTGCQQKSVGAEMWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDE----IQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVM 209
            MA     AAA+  +L  K+ S   D++ F+AELG +LPF       + P+ K++  IRE VE VQ+N+EEL  L+ RC  +TA  +VK + +  S  D+ P+E  ++     V  C  +     +  +   + EIA +   I  L +D+ L G+A++  +  +    +++    QA  Q  IL NT +I+DRL     KLAK+PK T   K WHVER +VM
Sbjct:    1 MAAKSSGAAAEVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVM 221          
BLAST of mRNA_C-linearis_contig10.505.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 6.300e-25
Identity = 71/194 (36.60%), Postives = 103/194 (53.09%), Query Frame = 0
Query:   18 KILSGAADAVEFVAELGVELPFIGPIFKSIKNIREKVEKVQSNREELIDLHERCSRITASFIVKCK-TELSGFDVAPLESLVQDVYTFVTGCQQKSVGAEMWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMN 210
            K+ S AAD V F  ELG E+P +G + K++K IR + E VQSN E L  L ERC+ +TA  IVK + T  S  +VAPLES V     F+  C ++ +     ++     E+  L+ R+D LT D+GL GIA +  +VD+++        + A ++   T       P  V +A VP G      WHV R  V++
Sbjct:   61 KMGSTAADIVMFTEELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKA-------MLAEVIAQNTM------PASVPVAAVPNGKPVEHSWHVARDRVVD 241          
BLAST of mRNA_C-linearis_contig10.505.1 vs. uniprot
Match: A0A6H5KMQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ3_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.170e-24
Identity = 63/152 (41.45%), Postives = 89/152 (58.55%), Query Frame = 0
Query:    6 LDAAAQAEELAGKILSGAADAVEFVAELGVELPFIGPIFKSIKNIREKVEKVQSNREELIDLHERCSRITASFIVKCKTELSGFDVAPLESLVQDVYTFVTGCQQKSVGAEMWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQ 157
            +D    A + A ++ S   DAV FVAELG  LP   P+ K++  IREKV+ V SNRE+L  L ERC  ITA  IVK +   S  DVAPLE  ++     V  C ++     + ++    GEIA L+ RI  L SDMGL GI ++ +++D+++
Sbjct:  104 IDPWTMATKCAREVGSAVVDAVSFVAELGEGLPLFQPVLKTLTAIREKVKTVISNREDLAALGERCVYITACVIVKFRKGSSELDVAPLEDCIRAAGVLVEHCGRRGKLLRVLKASSDRGEIAALNTRIRALESDMGLAGITVVGRKIDDLK 255          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G5K4_ECTSI1.920e-3941.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRK8_9PHAE1.450e-3639.09NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7FZW8_ECTSI1.960e-3641.15NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FZY7_ECTSI2.140e-2835.29NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D8LFN6_ECTSI6.300e-2536.60NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KMQ3_9PHAE1.170e-2441.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 47..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1551151..1552327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.505.1mRNA_C-linearis_contig10.505.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1551151..1554483 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.505.1 ID=prot_C-linearis_contig10.505.1|Name=mRNA_C-linearis_contig10.505.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=210bp
MATSLLDAAAQAEELAGKILSGAADAVEFVAELGVELPFIGPIFKSIKNI
REKVEKVQSNREELIDLHERCSRITASFIVKCKTELSGFDVAPLESLVQD
VYTFVTGCQQKSVGAEMWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIV
KRVDEIQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKP
WHVERRHVMN
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