mRNA_C-linearis_contig10.503.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig10.503.1
Unique NamemRNA_C-linearis_contig10.503.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 491 bits (1265), Expect = 2.590e-161
Identity = 263/436 (60.32%), Postives = 315/436 (72.25%), Query Frame = 3
Query:   42 EGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEI------------QQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGTYQMLDAHSTFAREKLMDRG 1313
            +G+I  L  R+  L  D+ L GIA + K +               ++  + Q      +L  T  IL +LP P  K+A VPKGT  HK WHVERR+V  TV +AL  DG P LVGLVG SG+GKTTAAS I+ S  VR  F+ GIVWL VN+G  + LP LM QLA+MV+E +G SVGR P+ SDDG AY+K+ VE GHGGKG KCLVVADNVWE +V+S+LLETGM +L+STR EELV  A GE V VDELSE +AE +L +AAEL   ARLPD A DL+ELCGRVAMDLAFVGRWSTVRGR+DR AWS+AA KV AE+DK G   E+  +E S V  R+AIL+AGFEDLA+GS+D+RV RLYL+L+V+PDGH FTVKDAAVLL+DRE   EDEASVG VV+ LE WTI+R  + TY+M DAHS FARE LMDRG
Sbjct:  124 KGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEATYRMHDAHSNFARESLMDRG 559          
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 490 bits (1262), Expect = 3.530e-161
Identity = 268/435 (61.61%), Postives = 319/435 (73.33%), Query Frame = 3
Query:   48 EIAGLHVRIDQLTSDMGLVGIAMIVKRVDE----IQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGTYQML---------DAHSTFAREKLMDRG 1313
            EIA +   I  L +D+ L G+A++  +  +    +++    QA  Q  IL NT +I+DRL     KLAK+PK T   K WHVER +VM  V EALT  G P LVGLVG SGSGKTTAASEI+RS+EVR AF+ G+VWLTVN GAK+RLP LM QLA M+ E VG   GR PA SDDG AYIK  ++RGHGGKG KCLVVADNVWE+EV+ KLLETGM VL+STR EELV G+ GE V VDE+SE +AE +L KA+ELP   RLPD AVDL+ELCGRVAMDLAFVGRWSTVRGR DR AWS+AAGKV AE+ KI  +  + T   +    RKA+L+AGFEDLA GS+D+RV RLYL+L+V+PDG  FTVKDAAVLL+DR+ SAEDEAS   VV+ILE W++LR  +G Y+M          DAHS FAREKLMDRG
Sbjct:  134 EIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVG---GRRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRG 565          
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 476 bits (1226), Expect = 5.890e-156
Identity = 248/422 (58.77%), Postives = 317/422 (75.12%), Query Frame = 3
Query:   48 EIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGTYQMLDAHSTFAREKLMDRG 1313
            EIAGL+  +D+LT+D+GL GIA++  +VD++++            L      L+ LP    KLA VP G    K WHVERRH M TVL+AL       +V L G SGSGKTT A+EI+RS EVR AF+ GIVWL VN+GAK+RLP LM QLARMV+E +G SVGR P+ S+D   YIK+ +E GH G+  KCLVVADNVWEE+V+SKL+ETGM VL+STR E +V  + G+AV VDELS+ DAE +L +AAELP+ +RLPD AVDL++LCGRVAMD+AFVGRWSTVRGR D  +WS+AA  +  E++K+G DP+N++AE+     RKAIL+ GFEDLA+GS+D+RV RLYL+L+V+PDGH F++KDAAVLL+DR  S EDEAS G VVD+LE W+I+R  +GTY+M DAH+ FARE L+DRG
Sbjct:  126 EIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKK-----------TLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQGTYRMHDAHTDFARECLLDRG 536          
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 472 bits (1214), Expect = 3.790e-155
Identity = 252/388 (64.95%), Postives = 294/388 (75.77%), Query Frame = 3
Query:  159 QANVQAHILVNTTAILD---RLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGTYQMLDAHSTFAREKLMDRG 1313
            QA  Q  IL N + ILD   +L     KL KVPKGT A K W+V+RRHVM+TV E L  DG P LVGLVGGSGSGKTT ASE +RS EV+ AF+ GI WL+VNDGAKERL  LM QLAR+VYE +G SVGR P  SDD  AYI++ +++G GGK  KCLVVADNVWE+EV+SKLLETGM VL+STR+  LVT A GE V VDELSE DA  +L +AAELP   ++P  AVDL+ELCGRVAMDLAFVGRWSTVRGR+DR AWS+A  KV  E+ K+G    +E    +    RKAILRAGFEDLA+GS+D+RV RLYL+L+V PDGH FTV+DAAVLL+DRE  AEDEASV  VVD LE WT+LR ++G Y+M DAHS FARE LMD G
Sbjct:    5 QAASQERILENQSKILDHMDQLSKTQAKLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSEQGAYRMHDAHSIFARETLMDHG 392          
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 451 bits (1159), Expect = 1.600e-147
Identity = 247/427 (57.85%), Postives = 305/427 (71.43%), Query Frame = 3
Query:   48 EIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQ---QHSEA-QANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGA-GGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGTYQMLDAHSTFAREKLMDRG 1313
            EIAGL  R++ L  D+ L GIA +  +V++++   +H +  QA   +  L N   +  R+      LA VP GT A K WHVERRHVM  V +AL  +G P LVGLVG SGSGKTTAA+EI+RS EVR AF+ GIVWL+VNDGA ERL  LM  LAR+V+E +G SVGR PA  DDG AY ++ ++ GHGGKG KCLVVADNVWEE VISKLLETGM VL+STR E LV  A GG  V VDELSEEDA  +L +A+EL    RLPD AV+LVELCGRVAMD+AFVGRWSTVRGR DR AWS+AA KV ++I++      ++         RKA+L+AGFEDLA+GS+D+R+PRLYL+L+V+PDGH FT KDA  LL+DR    EDE S  +++  LE W+ LR + G Y+M DAHS FAR+ +MDRG
Sbjct:  112 EIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSKIERSRV---SDNVWDIRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARDCVMDRG 535          
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 439 bits (1128), Expect = 2.440e-146
Identity = 239/394 (60.66%), Postives = 291/394 (73.86%), Query Frame = 3
Query:  138 IQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSD-DGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKG-TYQMLDAHSTFAREKLMDRG 1313
            ++Q  + QA  +  +L N   I+DRLP P +K A VP+GT   K WHVER HV  TV+EALT +  P LVGLVG SG+GKTTAA+E++RS+ VR +F+ GIVWLTVN GA +RLP LM QLARMV E +G  VG  P +S  +  AYIK+ +E GHGGKG KCL VADNVWE+EV+S LL+TGM+VL+STRHEELVTGA G  VR+DELS  DAE +L  AAELP A RLPD AVDL++LCGRVAMDLAFVGRWSTVRGR DR AWS+AA KV AEI KI  D   +  + +    RKAIL+AG EDLA+GS+D+RV RLYL+L+V+PD     V DAA+LL+DR+ +AEDE SV +V+D+LE W++LR      Y M D  S FAR  LMDRG
Sbjct:   66 MEQMVQNQAAARKELLANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVER-HVTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGD---DIVDGARGNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAEDEESVARVLDVLERWSVLRSTWAYKYYMHDVQSEFARASLMDRG 455          
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 1.360e-136
Identity = 243/435 (55.86%), Postives = 291/435 (66.90%), Query Frame = 3
Query:   48 EIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANVQAH----ILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGTYQML---------DAHSTFAREKLMDRG 1313
            +IA +   I  L +++ L G+A++  +  +++   E  A +QA     IL NT  I DRL     K AK+PK T   K WHVER  V+  V E LT DG PPLVGLVG SGSGKTTAASEI+RS+E                   +RLP LM QLA MVYE +G   GR PA SDDGTAYIK  + RGHGG+G KCL V DNVWE+EV+ +LLE GM VL+STR EELVTG  GE V V+ELSE +AE +L KAAELP   RLPD AVDL+ELCGRVAMDLAF GR STVRGR DR AWS+AA KV  E+ K  C+    T   +    RKA+++AGF DLA+GS+D+RV RLYL+L+V+PDG  FTVKDAAVL++DR  SAEDEAS   VV+ILE W+ L   +G Y+M          DAHS FAREKLMDRG
Sbjct:  108 QIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEIG---GRRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVVETRDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRG 520          
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 1.100e-78
Identity = 183/452 (40.49%), Postives = 249/452 (55.09%), Query Frame = 3
Query:   48 EIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEII------------------RSDEVRSAFAGGIVWLTVN--DGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDG--TAYIKRFVERGHGGKGS-----KCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETA-ESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEAS------VGKVVDILESWTILRPKKGTYQMLDAHSTFAREKL 1301
            E+  L+ R+D LT D+GL GIA +  +VD+++        + A ++   T       P  V +A VP G      WHV R  V++ V E L+    P +VGLVG SGSGKTT A+ I+                  R + VR  F  G+VWL V    G+ ER+P LM QLA+ V+E +  S G  P  S  G  +A+I  FV     GKGS     +CLVVAD+VWE +++ +L  TGM VL ++R  +LV    G  V VD+LS+ +AE LL  AAEL   + LP AA  ++E C R+A  L FVGRWSTV+G +D + W+EA   + AE+  +  +   + + E      R AILRAGF DLA  +++   P LYL+L+V+PDG  F  K+AAV LFD    AE+ AS        KVV  LE W ++      ++M DAHS FAR KL
Sbjct:  170 ELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKA-------MLAEVIAQNTM------PASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVR----GKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLA--AQNGFNPLLYLSLAVMPDGRAFGAKEAAVFLFDDW--AEERASQRRTRQAAKVVANLEQWAVVTMHGNLFRMHDAHSDFARNKL 600          
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 3.680e-71
Identity = 175/464 (37.72%), Postives = 255/464 (54.96%), Query Frame = 3
Query:   15 AEMWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANVQAHILVNTTAILDRLPP-PMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEIIRS-----------------------DEVRSAFAGGIVWLTVN--DGAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVE-LCGRVAMDLAFVGRWSTVRGREDRDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDR---EFSAEDEASVGKVVDILESWTILRPK-KGTYQMLDAHSTFAREKLMDRG 1313
            A+  R G+   +I  L  RI+ +   MGL G+  I+ R+++++Q                  IL RL P P  KLA VP G  A + WH  R HV + V + L+ D  P +  L G SG+GK+TAA++++R+                       + VR+ F+ G+V+L V   +GA +RLP LMR+LA+ ++E V K     P   + G +Y+K+ + R       +CLVVAD+VWE  V++KL ETGM VL++TR  E+V     E V VD+L+  +AE +L  AAELP+  RL D A+ +++ +CG VAMD+AFVG WS VR  +D  AW+EA  K++  I  +  D +      S V  R  ILRAGF+ L    E     +LY+A++V PDG+ F V DAAVLL D    + +        + ++ILE W +L     G Y+M D H  FAR+K+ D+G
Sbjct:  197 AQFRRDGD---DIQRLRARIEAIVPIMGLAGVVNIMDRLEDVRQ------------------ILARLQPRPRPKLAPVPPGLPAGEAWHAVRDHVEDEVYKILSGD-EPAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEAGEKGESYVKKMMTR----TKKRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVEP--NEGVDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDDSGAWAEAVSKINDTIVDVREDADG--MNDSQVK-RLGILRAGFDYLGE-EEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASGKYRMHDTHMDFARDKIRDQG 628          
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 4.240e-66
Identity = 173/443 (39.05%), Postives = 240/443 (54.18%), Query Frame = 3
Query:   15 AEMWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANVQAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEALTRDGAPPLVGLVGGSGSGKTTAASEII--RSDEVRSAFAGGIVWLTVND--GAKERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSKCLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEEDAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGR----EDRDAWSEAAGKVHAEIDKIGCDPE--NETAESSHVTWRKAILRAGFEDLAVGSEDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDILESWTILRPKKGT-YQMLDAHSTFAREKLMDR 1310
            A+  R GE   +I  L  RI+ +   MGL G+    +++D+I                     L RL P   KLA VPK     K +HV R  V++ V + L  DG P +  L GGSG+GKTT+A+ ++  R D VR+ F  G+VWL V    G  +RLP LM  LA+ ++E V K     P   DDG +Y+++ V +    +  +CLVVAD+VWE  V+ KL ETGM VL++TR  E+  G   E V +D L   +AE +L  AAELP   RL DA++ ++E+CGRVAMD AFVG W++VR      +   AW     ++ A+ID +    +  N   ++     R A+LRAGF+   +G ED     LY+ L+V P+G  F   DAAVLL       E+E      + ILE W +LR      Y+  DAH+ FAR+KLMDR
Sbjct:  119 AQFRRDGE---DIQRLRKRIEDVVPIMGLSGVVNNGEKLDQI---------------------LARLQPGP-KLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPT-GDDGVSYVRKIVSQ----EKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEM--GEPEERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKVGNTGEDNDRAINRLAVLRAGFK--YIGREDPLAQELYVKLAVFPEGFLFGESDAAVLL-------ENEEVAKGPISILERWGVLRTDASEKYRTHDAHADFARKKLMDR 520          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRK8_9PHAE2.590e-16160.32NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7FZY7_ECTSI3.530e-16161.61NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FZW8_ECTSI5.890e-15658.77NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KYW3_9PHAE3.790e-15564.95NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KLK9_9PHAE1.600e-14757.85NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5J759_9PHAE2.440e-14660.66NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KJ30_9PHAE1.360e-13655.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFN6_ECTSI1.100e-7840.49NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KE50_9PHAE3.680e-7137.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSI2_9PHAE4.240e-6639.05NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1524488..1526347 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score503.1
Seed ortholog evalue1.3e-139
Seed eggNOG ortholog2880.D7FZZ7
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons2
Model size1315
Cds size1293
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.503.1prot_C-linearis_contig10.503.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig10 1524488..1526327 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927335.6190505-CDS-C-linearis_contig10:1524487..15256481622927335.6190505-CDS-C-linearis_contig10:1524487..1525648Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 1524488..1525648 -
1690879633.5904176-CDS-C-linearis_contig10:1524487..15256481690879633.5904176-CDS-C-linearis_contig10:1524487..1525648Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 1524488..1525648 -
1622927335.6299841-CDS-C-linearis_contig10:1526195..15263271622927335.6299841-CDS-C-linearis_contig10:1526195..1526327Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 1526196..1526327 -
1690879633.6034794-CDS-C-linearis_contig10:1526195..15263271690879633.6034794-CDS-C-linearis_contig10:1526195..1526327Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 1526196..1526327 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927335.6388147-UTR-C-linearis_contig10:1526327..15263471622927335.6388147-UTR-C-linearis_contig10:1526327..1526347Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 1526328..1526347 -
1690879633.611943-UTR-C-linearis_contig10:1526327..15263471690879633.611943-UTR-C-linearis_contig10:1526327..1526347Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 1526328..1526347 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.503.1

>prot_C-linearis_contig10.503.1 ID=prot_C-linearis_contig10.503.1|Name=mRNA_C-linearis_contig10.503.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=431bp
MWRSGEIEGEIAGLHVRIDQLTSDMGLVGIAMIVKRVDEIQQHSEAQANV
QAHILVNTTAILDRLPPPMVKLAKVPKGTLAHKPWHVERRHVMNTVLEAL
TRDGAPPLVGLVGGSGSGKTTAASEIIRSDEVRSAFAGGIVWLTVNDGAK
ERLPPLMRQLARMVYEIVGKSVGRPPAQSDDGTAYIKRFVERGHGGKGSK
CLVVADNVWEEEVISKLLETGMSVLVSTRHEELVTGAGGEAVRVDELSEE
DAELLLTKAAELPQAARLPDAAVDLVELCGRVAMDLAFVGRWSTVRGRED
RDAWSEAAGKVHAEIDKIGCDPENETAESSHVTWRKAILRAGFEDLAVGS
EDKRVPRLYLALSVIPDGHEFTVKDAAVLLFDREFSAEDEASVGKVVDIL
ESWTILRPKKGTYQMLDAHSTFAREKLMDRG
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mRNA from alignment at C-linearis_contig10:1524488..1526347-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.503.1 ID=mRNA_C-linearis_contig10.503.1|Name=mRNA_C-linearis_contig10.503.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1860bp|location=Sequence derived from alignment at C-linearis_contig10:1524488..1526347- (Chordaria linearis ClinC8C monoicous)
AGAAAAGCGTAGGGGCAGAAATGTGGAGGTCTGGTGAGATCGAGGGTGAA ATCGCAGGACTGCACGTAAGGATCGACCAGCTGACAAGCGACATGGGTTT AGTGGGCATCGCCATGATCGTGAAAAGGGTCGACGAAATACAGCAACACT CGGTGAGATGCTCTTTCGGAGTATAGCTTTCTTTTGCTCACCGCTACATA CTCCAGACCCATGATCACAACACGCGAAACACCGCTCCGGCTTCATTGCC CCGCCACCGCGTGAGAGTTGGTTCCGACGAAATTTTCGCAATCCTTCACG CATCGTTTGGTTGCAAGTATTGTGAACAGTCTAGTGCGATAATGACCCCG CGGTAAGAACAGTGGCTAAGCGCGAAGGTGGATGGTTCCCAGAACCTTAT GTGTGCGGTTTGATCTTGAAATAGTTTCCTACACCAAGCGGCCGGTCCGC TGGAGTATTTCTCGAGATACGTCGACCCCCTGCTTGCAGTACGGGCTAAA CAAGGAATAGGCGTTTTTCACCATATGACTTTCGAATTGCACGTTCGAAG GAAGAAGTTGGTTTGTTCTTCCGAGCAGACTGGGGGATGCTCTTGTTCGG AGACACCACCATTCGAAACCCAATGCTCATAGATCGCGATATATTCTGTC TTGAAACCACAACCTTCCTGCATCTATCTTGTGAATCGTACATCCTCAGG AAGCTCAAGCCAACGTTCAGGCCCACATCCTGGTAAACACTACCGCCATT TTGGACCGTCTCCCTCCGCCAATGGTCAAGCTAGCCAAAGTCCCCAAGGG CACGCTGGCACACAAACCCTGGCACGTGGAACGCCGCCATGTCATGAACA CGGTGTTGGAGGCGCTCACACGTGATGGCGCGCCGCCGCTAGTGGGGCTC GTGGGCGGTAGTGGGTCAGGCAAGACCACGGCCGCGTCCGAGATCATCAG GAGCGACGAGGTCCGTTCGGCCTTCGCCGGCGGTATCGTGTGGCTAACGG TCAACGACGGCGCAAAAGAGCGTCTCCCGCCCTTGATGCGACAGCTGGCT CGCATGGTGTACGAAATTGTCGGGAAAAGCGTGGGGCGCCCGCCGGCTCA ATCGGACGACGGCACGGCCTATATCAAGCGATTCGTGGAGAGAGGTCATG GTGGGAAAGGGTCGAAGTGTCTCGTGGTGGCCGACAACGTGTGGGAGGAG GAGGTAATCTCGAAGCTGCTGGAGACGGGAATGTCGGTTCTGGTGTCGAC CCGCCATGAAGAGCTGGTGACGGGTGCAGGTGGCGAAGCCGTGAGAGTTG ACGAGCTGTCCGAAGAGGATGCTGAGTTGTTGTTGACGAAAGCGGCGGAG CTACCCCAGGCGGCACGCTTGCCCGACGCGGCCGTAGACCTCGTCGAGTT GTGCGGCCGTGTGGCGATGGACCTGGCATTTGTGGGCCGGTGGAGCACCG TTCGCGGCAGGGAAGACCGTGATGCTTGGTCCGAAGCGGCGGGAAAAGTC CATGCAGAGATCGACAAAATTGGATGCGATCCTGAAAACGAAACGGCTGA GAGCTCTCATGTAACATGGCGGAAGGCCATTCTGCGGGCCGGCTTCGAGG ATCTCGCGGTTGGCTCGGAGGACAAGAGAGTACCTCGGCTGTATTTGGCG CTTTCCGTGATACCGGATGGCCATGAGTTCACCGTGAAGGATGCTGCTGT CCTGCTGTTCGATCGGGAGTTTAGCGCCGAAGACGAGGCATCGGTGGGGA AAGTGGTGGACATCCTCGAAAGCTGGACCATTCTCAGGCCCAAGAAAGGG ACGTATCAAATGCTCGACGCCCACTCGACCTTTGCGAGGGAGAAGTTGAT GGACCGTGGG
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Coding sequence (CDS) from alignment at C-linearis_contig10:1524488..1526347-

>mRNA_C-linearis_contig10.503.1 ID=mRNA_C-linearis_contig10.503.1|Name=mRNA_C-linearis_contig10.503.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2586bp|location=Sequence derived from alignment at C-linearis_contig10:1524488..1526347- (Chordaria linearis ClinC8C monoicous)
ATGTGGAGGTCTGGTGAGATCGAGGGTGAAATCGCAGGACTGCACGTAAG
GATCGACCAGCTGACAAGCGACATGGGTTTAGTGGGCATCGCCATGATCG
TGAAAAGGGTCGACGAAATACAGCAACACTCGATGTGGAGGTCTGGTGAG
ATCGAGGGTGAAATCGCAGGACTGCACGTAAGGATCGACCAGCTGACAAG
CGACATGGGTTTAGTGGGCATCGCCATGATCGTGAAAAGGGTCGACGAAA
TACAGCAACACTCGGAAGCTCAAGCCAACGTTCAGGCCCACATCCTGGTA
AACACTACCGCCATTTTGGACCGTCTCCCTCCGCCAATGGTCAAGCTAGC
CAAAGTCCCCAAGGGCACGCTGGCACACAAACCCTGGCACGTGGAACGCC
GCCATGTCATGAACACGGTGTTGGAGGCGCTCACACGTGATGGCGCGCCG
CCGCTAGTGGGGCTCGTGGGCGGTAGTGGGTCAGGCAAGACCACGGCCGC
GTCCGAGATCATCAGGAGCGACGAGGTCCGTTCGGCCTTCGCCGGCGGTA
TCGTGTGGCTAACGGTCAACGACGGCGCAAAAGAGCGTCTCCCGCCCTTG
ATGCGACAGCTGGCTCGCATGGTGTACGAAATTGTCGGGAAAAGCGTGGG
GCGCCCGCCGGCTCAATCGGACGACGGCACGGCCTATATCAAGCGATTCG
TGGAGAGAGGTCATGGTGGGAAAGGGTCGAAGTGTCTCGTGGTGGCCGAC
AACGTGTGGGAGGAGGAGGTAATCTCGAAGCTGCTGGAGACGGGAATGTC
GGTTCTGGTGTCGACCCGCCATGAAGAGCTGGTGACGGGTGCAGGTGGCG
AAGCCGTGAGAGTTGACGAGCTGTCCGAAGAGGATGCTGAGTTGTTGTTG
ACGAAAGCGGCGGAGCTACCCCAGGCGGCACGCTTGCCCGACGCGGCCGT
AGACCTCGTCGAGTTGTGCGGCCGTGTGGCGATGGACCTGGCATTTGTGG
GCCGGTGGAGCACCGTTCGCGGCAGGGAAGACCGTGATGCTTGGTCCGAA
GCGGCGGGAAAAGTCCATGCAGAGATCGACAAAATTGGATGCGATCCTGA
AAACGAAACGGCTGAGAGCTCTCATGTAACATGGCGGAAGGCCATTCTGC
GGGCCGGCTTCGAGGATCTCGCGGTTGGCTCGGAGGACAAGAGAGTACCT
CGGCTGTATTTGGCGCTTTCCGTGATACCGGATGGCCATGAGTTCACCGT
GAAGGATGCTGCTGTCCTGCTGTTCGATCGGGAGTTTAGCGCCGAAGACG
AGGCATCGGTGGGGAAAGTGGTGGACATCCTCGAAAGCTGGACCATTCTC
AGGCCCAAGAAAGGGACGTATCAAATGCTCGACGCCCACTCGACCTTTGC
GAGGGAGAAGTTGATGGACCGTGGGGAAGCTCAAGCCAACGTTCAGGCCC
ACATCCTGGTAAACACTACCGCCATTTTGGACCGTCTCCCTCCGCCAATG
GTCAAGCTAGCCAAAGTCCCCAAGGGCACGCTGGCACACAAACCCTGGCA
CGTGGAACGCCGCCATGTCATGAACACGGTGTTGGAGGCGCTCACACGTG
ATGGCGCGCCGCCGCTAGTGGGGCTCGTGGGCGGTAGTGGGTCAGGCAAG
ACCACGGCCGCGTCCGAGATCATCAGGAGCGACGAGGTCCGTTCGGCCTT
CGCCGGCGGTATCGTGTGGCTAACGGTCAACGACGGCGCAAAAGAGCGTC
TCCCGCCCTTGATGCGACAGCTGGCTCGCATGGTGTACGAAATTGTCGGG
AAAAGCGTGGGGCGCCCGCCGGCTCAATCGGACGACGGCACGGCCTATAT
CAAGCGATTCGTGGAGAGAGGTCATGGTGGGAAAGGGTCGAAGTGTCTCG
TGGTGGCCGACAACGTGTGGGAGGAGGAGGTAATCTCGAAGCTGCTGGAG
ACGGGAATGTCGGTTCTGGTGTCGACCCGCCATGAAGAGCTGGTGACGGG
TGCAGGTGGCGAAGCCGTGAGAGTTGACGAGCTGTCCGAAGAGGATGCTG
AGTTGTTGTTGACGAAAGCGGCGGAGCTACCCCAGGCGGCACGCTTGCCC
GACGCGGCCGTAGACCTCGTCGAGTTGTGCGGCCGTGTGGCGATGGACCT
GGCATTTGTGGGCCGGTGGAGCACCGTTCGCGGCAGGGAAGACCGTGATG
CTTGGTCCGAAGCGGCGGGAAAAGTCCATGCAGAGATCGACAAAATTGGA
TGCGATCCTGAAAACGAAACGGCTGAGAGCTCTCATGTAACATGGCGGAA
GGCCATTCTGCGGGCCGGCTTCGAGGATCTCGCGGTTGGCTCGGAGGACA
AGAGAGTACCTCGGCTGTATTTGGCGCTTTCCGTGATACCGGATGGCCAT
GAGTTCACCGTGAAGGATGCTGCTGTCCTGCTGTTCGATCGGGAGTTTAG
CGCCGAAGACGAGGCATCGGTGGGGAAAGTGGTGGACATCCTCGAAAGCT
GGACCATTCTCAGGCCCAAGAAAGGGACGTATCAAATGCTCGACGCCCAC
TCGACCTTTGCGAGGGAGAAGTTGATGGACCGTGGG
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