prot_C-linearis_contig10.500.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.500.1
Unique Nameprot_C-linearis_contig10.500.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length125
Homology
BLAST of mRNA_C-linearis_contig10.500.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 4.810e-31
Identity = 66/124 (53.23%), Postives = 85/124 (68.55%), Query Frame = 0
Query:    1 MLDAHSILAREKLLDHGYVRKPAMERLVKHISSLDSLRFHESHVLKGLWRVVERVGGDDWGWDKRRRYSKEFAKVDKSDPSCMESLQAVADFQEVQEDWKGASTTGQRRLEVEKTELGADHPMV 124
            M DAH+  ARE LLD G+VR+PA++R  +++SSLD LR  + +VLKGLW  +ER+GGD WG  K R Y K    + +SD     + +AV  FQE QED +GAS + +R LEVEK ELGADHP V
Sbjct:  520 MHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWG--KTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFV 641          
BLAST of mRNA_C-linearis_contig10.500.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.650e-30
Identity = 67/125 (53.60%), Postives = 85/125 (68.00%), Query Frame = 0
Query:    1 MLDAHSILAREKLLDHGYVRKPAMERLVKHISSLDSLRFHESHVLKGLWRVVERVGGDDWGWDKRRRYSKEFAKVDKSDPS-CMESLQAVADFQEVQEDWKGASTTGQRRLEVEKTELGADHPMV 124
            M DAHSI ARE L+DHGYVR+PA++R V  IS L+ LR  + +VLKGLW  VE VGGD  GW K R YS     +D+   +   +++ A+A  QE  EDW+GASTT +R LE+EK +LGADH  V
Sbjct:  376 MHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGD--GWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHV 498          
BLAST of mRNA_C-linearis_contig10.500.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 4.230e-30
Identity = 67/125 (53.60%), Postives = 86/125 (68.80%), Query Frame = 0
Query:    1 MLDAHSILAREKLLDHGYVRKPAMERLVKHISSLDSLRFHESHVLKGLWRVVERVGGDDWGWDKRRRYSKEFAKVDKSD-PSCMESLQAVADFQEVQEDWKGASTTGQRRLEVEKTELGADHPMV 124
            M DAHS  ARE L+D G VR+PA++RLV+ ISSL++LR    + LK LW  V+RVGGD  GW   R Y K    +D+S+ P   E+++AVA FQE QEDW GA+ T +R L VE+ +LGADHP V
Sbjct:  543 MHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGD--GWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPYV 665          
BLAST of mRNA_C-linearis_contig10.500.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 7.060e-22
Identity = 55/116 (47.41%), Postives = 74/116 (63.79%), Query Frame = 0
Query:    3 DAHSILAREKLLDHGYVRKPAMERLVKHISSLDSLRFHESHVLKGLWRVVERVGGDDWGWDKRRRYSKEFAKVDKSDPSCMESLQAVADFQEVQEDWKGASTTGQRRLEVEKTELG 118
            DAHS  AREKL+D G VR+PA+ R  ++ISSLD+LR    H ++ LW  VE+VGGD  GW   R Y    A ++ SDP    S+ AVA FQ  +EDW+ A  T +R L++  T++G
Sbjct:  551 DAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGD--GWKSTRPYEAALAGMEDSDPLLPTSVVAVAKFQRHEEDWEEAIATCRRLLDMPVTKVG 664          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FZW8_ECTSI4.810e-3153.23NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KYW3_9PHAE1.650e-3053.60NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KRK8_9PHAE4.230e-3053.60NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7FZY7_ECTSI7.060e-2247.41NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1505648..1506022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.500.1mRNA_C-linearis_contig10.500.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1505408..1506190 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.500.1 ID=prot_C-linearis_contig10.500.1|Name=mRNA_C-linearis_contig10.500.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=125bp
MLDAHSILAREKLLDHGYVRKPAMERLVKHISSLDSLRFHESHVLKGLWR
VVERVGGDDWGWDKRRRYSKEFAKVDKSDPSCMESLQAVADFQEVQEDWK
GASTTGQRRLEVEKTELGADHPMV*
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