prot_C-linearis_contig10.491.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.491.1
Unique Nameprot_C-linearis_contig10.491.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1882
Homology
BLAST of mRNA_C-linearis_contig10.491.1 vs. uniprot
Match: A0A6H5KXJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXJ8_9PHAE)

HSP 1 Score: 1103 bits (2852), Expect = 0.000e+0
Identity = 872/1684 (51.78%), Postives = 976/1684 (57.96%), Query Frame = 0
Query:    1 MGINNLWQLLSPVGRSVSIETLAGKTLAVDVSIWLTQFIKAMRDDDGKVTKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKGRTLAARRKLRSEGTDSSVRKTAQRILASQLKKHKNAISAAKRASFQAAPVAFNPVYQNPGGDVPPXXXXXXXXXXXXXXEKTVDADPGAGAEAGVAEVGGKDXXXXXX------------------------GVDWEEQEADRGDGGR----ALDAGRQAVVDSDGDEAAAAQGXXXXXXXXXXXXXXXXXXXXXXXXXXLAAWGVDTDDDDETG-SVGWEEVELPERNEDIDPEVIACLPDHVKKQVIEAAKRRQRMRSRAQYMPVAGNPAMYSQTQLSNFLRAKQLNSQILKAQKQEDGEREGKRIASEAGRRYIMTAAGTSXXXXXXXXXXXXXKEPPTAGSS--SKRPRRITDDGDGFKEWSYAPETGVDTGVQKTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXFLPASEDEEDAPGKRKSTSSSGKGRSRESYPGDHGGDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKRRASGKGPLSAARPKPIGHDLPRPRGGKGGERRLQRLGDTADFDDEXXXXXXXXXKHAGSGVHQPSAQQ-----DSESADTVARMLQEEEDRRAALAVQNGMDAPAAVLAG---DGDDGHGDDPAAVADDVD----NSLDPLGLLSSASRRKLSPGSPGGVTVGPG-DGDAADKRAVHGTAPSKLLTSGGGRGGQGSAEGRGPVDDAEIELEIDLKDLESGXXXXXXXGGPPGLVSLFSTGAGDXXXLRARAGSXXXXXXXXXXDFDGFVDXXXXXXXXXXXXXXXXXXXXXXXLERGRFSSTTSSQGATTNVTNEEALQRSVDVASRMAGWAGRVVERVLKEHRQPA---ASSASAAGSSSFRTARANSSSRAAAAHSIPAFGPVCTGPAASGVGSHAAAQ-----------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSYKTGEGARRERRLGAGATXXXXXXXXXXXXXXXXXXXXXVFVSSSEEDNLADSASLPAGRDGPAMDGKSSV-----SRDG---VLAVSSAPAGGKEFEGQGGGGPAVSEAVPKAQAESPATKGVVSTAG---GDKCSTVQGAHSVATAGSGESAAAAGESRRTADKEGQHSADEKPRERGGSGAPGLPLPSSTASPXXXXXXXXXXXXXXXGVAS------ARPTEAATAAAPGFGKEDSEDAEKVVRFAGTGEGEDPAASDTPAGSASALQENTSDVPPLGGDDFADTESGTGVLFQPSMPAAQEXXXXXXXXXXXXXXXXXXX--ESLPSSAYLGDMDEDELARESXXXXXXXXXXXXXAETVTEEMKEEVMELLKLFGVPYVVAPMEAEAQCCVLEQLKLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEKDLGVGTEEVIALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKFRKWIDGFDPLLDQELEELTKHGSEKEIDGLSPEMKFHLKHKTARNRWTVPEGFPSKEVINAYNSPQVDKSEEPFSWAAPEIDGLQALCQRVLGWDRVQSDGLLMPMVKELDKAGFSQPRIDRYFMTYHDNRRVAAIKSKRLRSAVEDLANGPTEVITV 1601
            MGI NLWQLLSPVGRSVSIETLAGKTLAVDVSIWLTQFIKAMRDDDGKV KNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALK RTLAARRKLR EGTD SVRKTAQRILASQLKKHK AISAAKRAS QAA  AFNPVYQ  GGD+           XXXXX  T     G    A         XXXXXX                        GVDW +QE ++G GG      L AGRQAVVDSDGDE                 X XXXXXXX       AAW VDTD+++E G  V WEEVELPERNEDIDPEVIA LPDHVKKQVIEAAKRRQRMRSRAQYMPVAGNPAMYSQTQLSNFLR+ QLN+QILKAQKQ+D +R GKRIASEAGRRYIMT AG S           XX       SS  S R RRITD G+ FK WSYA   G     ++ GG                XXXXXXXXX  FLP SED   AP  R     +G      + P +    +                                GG  R  G+  L   RPKPIGHDL    GGKG  RRLQRL D       XXXXXXXXX        +P+A++     DS +AD +AR+LQEEEDRRAA+ +Q+ +D P+   AG   D DDG G       + +     N LDPLGLL +   R  SP +    ++  G +  AA+ +A     PSK L +    G      G     DAEIE+EIDLK+L +G       GG   L+ LF +       +   +G+      XX   FDGFV XXXXXXXXXXXX               R SS  S+QGATT+ TNE ALQRSVD+ASRMAGWAGRVVERVLKEHR+     + S  AA +S   T   N    A +A        + TGPAASGVGSHA AQ                 A                      XXXXXXXXXXXXXXX   PPS   G G R++R     A                         + +    +   A +P G +G    G+ +V     + DG   V +V S P G +     G  GP           E+   KG V+  G     +    +GA       SGES AA G                          PG+   SS ASP                 A       A   +AA A     G+    DA +V + A   +G+  A   T A         T  VPP   D+    E GT  LF PS+P                         E +  ++YL  MDEDEL  ES             AETVTEEMKEEVMELLKLFGVPYVVAPMEAEAQCC+LEQL+LVDGTVTDDSDAFAFGGRAVYKNIF+ERK+VEAYLLPDAEKDLGVGT+EVIALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKF+KWIDGFDPLLDQELE LTK GS+KEIDGLS EMKFHLKH+TARNRWTVPEGFPS+EVINAYN+PQVD+SEEPFSWAAP++DGL+ALCQRVLGWDR QSDGLLMPMVKEL++  F+QPRIDRYFM YHDN+RVAAIKSKRLR+AVEDLA G TEVITV
Sbjct:    1 MGIKNLWQLLSPVGRSVSIETLAGKTLAVDVSIWLTQFIKAMRDDDGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKARTLAARRKLRLEGTDCSVRKTAQRILASQLKKHKAAISAAKRASSQAAVPAFNPVYQ--GGDI------SSTATXXXXXXGTTGTGSGGTTTARTTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVDWADQEVEQGGGGEDGLGVLGAGRQAVVDSDGDEVYEGADRPGGGRGGGAAXVXXXXXXXAAGDVEAAAWAVDTDEEEEEGRGVAWEEVELPERNEDIDPEVIASLPDHVKKQVIEAAKRRQRMRSRAQYMPVAGNPAMYSQTQLSNFLRSNQLNAQILKAQKQDDSDRTGKRIASEAGRRYIMTPAGASGRIGAVSGAGGXXXXTRNGASSVGSSRRRRITDGGEDFKAWSYAGSAGA----EENGGVVKTRPTAAPTNADTDXXXXXXXXXGGFLPESED---APVARTRDGGTG------APPDEEPSGEFPSGGYVSEEGGRLLPPSEEEDSSGPEVPAVDGGTGRTRGRVQLPVHRPKPIGHDLA--SGGKGKRRRLQRLADXXXXX-XXXXXXXXXXXXXXXXXXRPAARRARPRPDSGAADAIARVLQEEEDRRAAMTLQDEID-PSLSTAGVFADNDDGSGGSSTGKGNLLPETGVNDLDPLGLLRTRKARSESPTATARSSISDGSEAAAAENKAAQTPRPSKSLGARSSVGDPYEGGGSSSGGDAEIEVEIDLKNLVAG-------GGRRDLMELFPSSGAATGDVGGGSGAVEEDSDXX---FDGFVXXXXXXXXXXXXX---------------RASSQVSAQGATTSYTNEAALQRSVDMASRMAGWAGRVVERVLKEHRKARKRPSFSHRAASASGHGTGPRNGPQNAESAI-------IRTGPAASGVGSHAVAQLAIDERRRLGTIGGNTAATTTSIDIGRQTSGSASTAEPTTXXXXXXXXXXXXXXXAARPPSPGAGRG-RQQRGAAVDAPADPKGTAHPRSKSCFRPEIGGELPAPAGAAAVTAPA-VPRGSEGENSKGERAVGTGNMAEDGDGDVESVFSEPDGER-----GSPGPLGQHTHAGVSREAAGVKGTVTGEGFPPHTEAEETEGAEET----SGESVAAPG--------------------------PGVTSASSPASPPEPSEGVTASKEKGGESAPVDVPPRAILQQAAAAETQVQGRRGCHDATEVDKNA-CAKGDSVADGPTSA---------TRKVPPPHDDEVG--EGGTDALFAPSVPGDTRPGPSRVGIARGGEGKEANGDGEGVMGTSYLEGMDEDELEEESEKLKREGNKAQRDAETVTEEMKEEVMELLKLFGVPYVVAPMEAEAQCCMLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFSERKFVEAYLLPDAEKDLGVGTDEVIALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKFKKWIDGFDPLLDQELEGLTKRGSQKEIDGLSLEMKFHLKHRTARNRWTVPEGFPSEEVINAYNNPQVDRSEEPFSWAAPDVDGLRALCQRVLGWDRDQSDGLLMPMVKELERGSFAQPRIDRYFMAYHDNKRVAAIKSKRLRTAVEDLAQGSTEVITV 1578          
BLAST of mRNA_C-linearis_contig10.491.1 vs. uniprot
Match: D7FZY4_ECTSI (DNA repair enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY4_ECTSI)

HSP 1 Score: 1056 bits (2730), Expect = 0.000e+0
Identity = 886/1675 (52.90%), Postives = 986/1675 (58.87%), Query Frame = 0
Query:    1 MGINNLWQLLSPVGRSVSIETLAGKTLAVDVSIWLTQFIKAMRDDDGKVTKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKGRTLAARRKLRSEGTDSSVRKTAQRILASQLKKHKNAISAAKRASFQAAPVAFNPVYQNPGGDVPPXXXXXXXXXXXXXX----------------------EKTVDADPGAGAEAGVAEVGGKDXXXXXXGVDWEEQEADRGDGGRALDAGRQAVVDSDGDEA-AAAQGXXXXXXXXXXXXXXXXXXXXXXXXXXLAAWGVDTDDDDETGSVGWEEVELPERNEDIDPEVIACLPDHVKKQVIEAAKRRQRMRSRAQYMPVAGNPAMYSQTQLSNFLRAKQLNSQILKAQKQEDGEREGKRIASEAGRRYIMTAAGTSXXXXXXXXXXXXXKEPPTAGSS--SKRPRRITDDGDGFKEWSYAPETGVDTGVQKTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXFLPASEDEEDAPGKRKSTSSSGKGRSRESYPGDHGGDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKRRASGKGPLSAARPKPIGHDLPRPRGGKGGERRLQRLGDTADF-DDEXXXXXXXXXKHAGSGVHQPSAQQ-----DSESADTVARMLQEEEDRRAALAVQNGMDAPAAVLA--GDGDDGHGDDPAAVA------DDVDNSLDPLGLLSSASRRKLSPGSPGGVTVGPGDGDAADKRAVHGTAPSKLLTSGGGRGGQGSAEGRGPVDDAEIELEIDLKDLESGXXXXXXXGGPPGLVSLFSTGAGDXXXLR--ARAGSXXXXXXXXXXDFDGFVDXXXXXXXXXXXXXXXXXXXXXXXLERGRFSSTTSSQGATTNVTNEEALQRSVDVASRMAGWAGRVVERVLKEHRQPAASSASAAGSSSF-RTARANSSSRAAAAHSIPAFGP-------VCTGPAASGVGSHAAAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------PPSYKTGEGARRERRLGAGATXXXXXXXXXXXXXXXXXXXXXVFVSSSEEDNLADSASLPAGRDGPAMDGKSSV-----SRDGVLAVSSAPAGGKEFEGQGGGGPAVSEAVPKAQAESPATKGVVSTAGGDKCSTVQGAHSVATAGSGESAAAAGESRRTADKEGQHSADEKPRERGGSGAPGLPLPSSTASPXXXXXXXXXXXXXXXGVASARPTEAATAAAPGFGKEDSEDAEKVVRFAGTGEGEDPAASDTPAGSASALQENTSDVPPLGGDDFADTESGTGVLFQPSMPAAQEXXXXXXXXXXXXXXXXXXX--ESLPSSAYLGDMDEDELARESXXXXXXXXXXXXXAETVTEEMKEEVMELLKLFGVPYVVAPMEAEAQCCVLEQLKLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEKDLGVGTEEVIALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKFRKWIDGFDPLLDQELEELTKHGSEKEIDGLSPEMKFHLKHKTARNRWTVPEGFPSKEVINAYNSPQVDKSEEPFSWAAPEIDGLQALCQRVLGWDRVQSDGLLMPMVKELDKAGFSQPRIDRYFMTYHDNRRVAAIKSKRLRSAVEDLANGPTEVITV 1601
            MGI NLWQLLSPVGRSVSIETLAGKTLAVDVSIWLTQFIKAMRDDDGKV KNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALK RTLAARRKLRSEGTDSSVRKTAQRILASQLKKHK AISAAKRAS QAA  AFNPVYQ  GGD+    XXXXXXXXXXXX                      +  V  +  AGA           XXXXXX             G   L AGR AVVDSDGDE             XXXXXXXXXXXXXXXXXXXX              G V WEEVELPERNEDIDPEVIA LPDHVKKQVIEAAKRRQRMRSRAQYMPVAGNPAMYSQTQLSNFLR+ +LN+QILKAQKQ+D +R GKRIASEAGRRYIMT AG S          XXX       SS  S R RRITDDGD FK WSYA   G     +  GG                 XXXXXXXXXX                                       XXXXXXXXXXXXXXXXXXXXX          GGK R   +  L   RPKPIGHDL    GGKG  RRLQRL D  +  +DEXXXXXXXXX      V +P+A++     DS +AD +AR+LQEEEDRRAA+ +Q+ +D   + +    D DDG G    A        +   N LDPLGLL +   R  SP +   +  G     AA K A     PSK L    G GG     G     DAEIEL+IDLK LE+G       GG P L+ LFS+       +   ARAGS             G V+  XXXXXXXXXXXXXXXXXXXXX    R SS  S+QGAT + TNE ALQRSVD+ASRMAGWAGRVVERVLKEHR+P  S   AAGSSS  R AR  S+S       +P  GP       + TGPAASGVGSHAAAQ+                                                          PPS   G G  R++R  A                          +++  +     + ++  G +G   +G+ +V     + DG   V S  +   E +G+ G    + +  P   +   A     +T  G    T       A   SGE+ AA G    +A                 S +P  P    TAS                 +  A P  AA A + G G+    DA +V   A   +GE  A      G  SA ++ +   PP G D       GT  LF PS+                          E +  ++YL  MDEDEL  ES             AETVTEEMKEEVM+LLKLFGVPYVVAPMEAEAQCCVLEQL+LVDGTVTDDSDAFAFGGRAVYKNIF++RK+VEAYLLPDAEKDLGVGT+EV+ALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKF+KWIDGFDPLLDQELE LTK GS+KEIDGLS EMKFHLKH+TARNRWTVP+GFPS+EVINAYN+PQVD+SEEPFSWAAP++DGL ALCQRVLGWDR QSDGLLMPMVKELD+  F+Q RIDRYFM YHDN+RVAAIKSKRLR+AVEDLA G +EVITV
Sbjct:    1 MGIKNLWQLLSPVGRSVSIETLAGKTLAVDVSIWLTQFIKAMRDDDGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKARTLAARRKLRSEGTDSSVRKTAQRILASQLKKHKAAISAAKRASSQAAVPAFNPVYQ--GGDMSSAPXXXXXXXXXXXXXXXXXXXXXXXXXKQGEEGGVVQPLVSPEEAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLG--VLGAGRHAVVDSDGDEVYEGTNRPGEERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAWEEVELPERNEDIDPEVIASLPDHVKKQVIEAAKRRQRMRSRAQYMPVAGNPAMYSQTQLSNFLRSNKLNAQILKAQKQDDSDRTGKRIASEAGRRYIMTPAGASGRSGAVSGAGXXXXXXRNGASSVGSSRRRRITDDGDDFKAWSYAGSAGA----EGNGGGGVTARPTSLPTNADTDXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGPEVPAVDGGKGRTRRRVQLPVHRPKPIGHDLA--SGGKGKRRRLQRLADADEGKEDEXXXXXXXXXXXXXXXVERPAARRAQPGPDSGAADAIARVLQEEEDRRAAMTLQDEIDPSVSTVGVFADNDDGSGXXXXATGKGDLLPETGANDLDPLGLLGARKARSGSPAATESIADGTA---AATKNAAQAPPPSKALGGRSGVGGPLEGGGGSSGGDAEIELDIDLKHLEAG-------GGRPDLMELFSSSGAATGDVGSGARAGS-------------GAVEEDXXXXXXXXXXXXXXXXXXXXXX---RASSQVSAQGATASYTNEAALQRSVDMASRMAGWAGRVVERVLKEHRKPPGS---AAGSSSLHRAARTTSAS-------VPGTGPRNGESSTIRTGPAASGVGSHAAAQSASDERRRLEITGGNAGATTTSIDIGRQTSGSASTAAPTTAXXXXXXXXGRQASGDAARPPSPGAGRG--RQQRGAAVDAPADPKGTAHPHSESRSRPEIGGELTAPADTAAVTAPAVARGSEGKNDEGRGAVGTGNMAEDGYRDVESVFS---ESDGERGPPGPLGQRTPAGVSREAAGARGTATGEGFPPRTEAEEPEGAEEASGEAVAAPGPGATSAXX---------------SASPPDPAEGVTASKEKGGESARVGV-----LPQAIPPRAAAAESLGQGQRGGHDATEVDENA-CAKGEPVA-----EGPTSATRKYS---PPRGNDGDEVGGGGTDSLFAPSVRGDTRPGPSRVGTAAGGGGIEANGDGEGVMGTSYLEGMDEDELEEESEKLKREGNKAQRDAETVTEEMKEEVMDLLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSDAFAFGGRAVYKNIFSDRKFVEAYLLPDAEKDLGVGTDEVVALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKFKKWIDGFDPLLDQELEGLTKRGSQKEIDGLSLEMKFHLKHRTARNRWTVPDGFPSEEVINAYNNPQVDRSEEPFSWAAPDVDGLMALCQRVLGWDRDQSDGLLMPMVKELDRGSFAQSRIDRYFMAYHDNKRVAAIKSKRLRTAVEDLAQGSSEVITV 1589          
BLAST of mRNA_C-linearis_contig10.491.1 vs. uniprot
Match: B8C7S2_THAPS (DNA repair enzyme (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7S2_THAPS)

HSP 1 Score: 294 bits (753), Expect = 3.850e-86
Identity = 145/283 (51.24%), Postives = 199/283 (70.32%), Query Frame = 0
Query: 1311 TVTEEMKEEVMELLKLFGVPYVVAPMEAEAQCCVLEQLKLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEKDLGVGTEEVIALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKFRKWIDGF-DPLLDQELEELTKHGSEKEIDG-LSPEMKFHLKHKTARNRWTVPEGFPSKEVINAYNSPQVDKSEEPFSWAAPEIDGLQALCQRVLGWDRVQSDGLLMPMVKELDKAGFSQPRIDRYFMTYHDNRRVAAIKSKRLRSAVEDL 1591
            T+T+EMKE+++ELL+L G+P+V +P EAEAQC  LE+L LVDG VT+DSD F FGGR VYKN FNE++YVEAY   DAEK+L +G  ++IALA+LLG DYT+GV+GVGIVN ME++ AFP+ G+  H  L KFR+W+DG  DP  +               DG LS EM FH KHK+AR+RW  P  FPS+ +I+AY  P VDKSE  FSWA P ++GL+  C   LGWD+ ++  ++ P++K L+ +G  Q R++ YFM Y D  + A ++SKRL++ ++ +
Sbjct:   12 TITDEMKEDILELLELCGIPWVESPSEAEAQCAALEELGLVDGVVTEDSDIFVFGGRKVYKNFFNEQQYVEAYYAKDAEKELALGKHQMIALAMLLGGDYTDGVKGVGIVNGMEILQAFPI-GEDIHASLQKFREWLDGMGDPPSN--------------ADGTLSNEMIFHKKHKSARHRWVAPSDFPSRAIISAYQKPTVDKSEARFSWAKPNMEGLRHFCSETLGWDQEETSRIVGPVLKVLE-SGSKQTRLESYFMKYDDGIKFAEVRSKRLKAVLDGI 278          
BLAST of mRNA_C-linearis_contig10.491.1 vs. uniprot
Match: A0A7S4MZJ3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MZJ3_9STRA)

HSP 1 Score: 301 bits (771), Expect = 1.870e-81
Identity = 146/289 (50.52%), Postives = 205/289 (70.93%), Query Frame = 0
Query: 1312 VTEEMKEEVMELLKLFGVPYVVAPMEAEAQCCVLEQLKLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEKDLGVGTEEVIALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKG---AHHGLSKFRKWIDGFDPLLDQELEELTKHGSEKEIDGLSPEMKFHLKHKTARNRWTVPEGFPSKEVINAYNSPQVDKSEEPFSWAAPEIDGLQALCQRVLGWDRVQSDGLLMPMVKELDK---AGFSQPRIDRYFMTYHDNRRVAAIKSKRLRSAVEDLANG 1594
            +TEEMKEE+++LL+LFGVPYV +P EAEAQC +LE+L LVDG VT+DSD F FGGR VYKNIF+++KYVE YL  DAE+++G+  E +IALA+L+G DYTEGV+GVGIVN ME++ AF         A  GL  FRKW++GFDP ++    + TK G     + ++ E  FHLKH++AR RWTVP+ FP+  V+ AY +P VD S   FSW  P+++ L+A C   LGW   ++DG ++P+VK++++    G  Q R++ +FM Y DN + A ++SKRLRS + ++ +G
Sbjct:  629 MTEEMKEEIIQLLRLFGVPYVESPAEAEAQCAMLEELGLVDGVVTEDSDIFVFGGRNVYKNIFDDQKYVEVYLSRDAEREIGLTRERMIALAMLMGGDYTEGVKGVGIVNGMEILEAFFTSAGALDDAEVGLEAFRKWLEGFDPSIELNGTDKTKRGG---TEDMTSEEIFHLKHRSARTRWTVPKDFPAANVLKAYRNPVVDTSRAKFSWGIPDVESLRAFCYGKLGWGAEETDGAVVPVVKQMERLQQGGPRQTRLESFFMKYEDNIKFADVRSKRLRSVLGNVHSG 914          
BLAST of mRNA_C-linearis_contig10.491.1 vs. uniprot
Match: A0A7S2LMT5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LMT5_9STRA)

HSP 1 Score: 283 bits (724), Expect = 4.750e-80
Identity = 145/304 (47.70%), Postives = 199/304 (65.46%), Query Frame = 0
Query: 1289 DELARESXXXXXXXXXXXXXAETVTEEMKEEVMELLKLFGVPYVVAPMEAEAQCCVLEQLKLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEKDLGVGTEEVIALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKFRKWIDGFDPLLDQELEELTKHGSEKEIDGLSP-EMKFHLKHKTARNRWTVPEGFPSKEVINAYNSPQVDKSEEPFSWAAPEIDGLQALCQRVLGWDRVQSDGLLMPMVKELDKAGFSQPRIDRYFMTYHDNRRVAAIKSKRLRSAVEDL 1591
            DEL  E+             ++ +TE+MKEEV+ELL+LFG+P+V AP EAEAQC  LEQL LV+G VTDDSDA  FGG+ VYKNIF++RKYVE Y   DA+ +L +     +ALA+LLG DYT GV+GVGIVN ME++ A+P  G     GL KF++W+DGF+    +++E+  K      ++GL   E  F +KH+TAR RW  P+ FPS  V++AY  P VD+S + FSW AP++  L+  C+  LGW    +D +L+P+V+ L      Q R++ YFM Y DN +VA ++SKRLR A+  L
Sbjct:  159 DELKEEAGVFEREEKSRQRDSDMITEDMKEEVIELLQLFGIPFVHAPAEAEAQCVALEQLGLVNGVVTDDSDAIVFGGQVVYKNIFDDRKYVEIYQAEDAQNELALNRNHFVALAMLLGGDYTSGVKGVGIVNGMEIMQAYPDIGNDVMGGLQKFKRWLDGFNA---EDIEQSCK------VEGLEDKERLFAIKHRTARTRWEPPKDFPSPGVMDAYLKPVVDQSSDRFSWGAPDVPRLRRFCELKLGWTEEDTDKVLIPIVERLQNRS-RQTRLESYFMRYEDNIKVATVRSKRLREAMHGL 452          
BLAST of mRNA_C-linearis_contig10.491.1 vs. uniprot
Match: A0A7S2WUF9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUF9_9STRA)

HSP 1 Score: 296 bits (758), Expect = 8.930e-80
Identity = 141/280 (50.36%), Postives = 195/280 (69.64%), Query Frame = 0
Query: 1309 AETVTEEMKEEVMELLKLFGVPYVVAPMEAEAQCCVLEQLKLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEKDLGVGTEEVIALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKFRKWIDGFDPLLDQELEELTKHGSEKEIDGLSPEMKFHLKHKTARNRWTVPEGFPSKEVINAYNSPQVDKSEEPFSWAAPEIDGLQALCQRVLGWDRVQSDGLLMPMVKELDKAGFSQPRIDRYFMTYHDNRRVAAIKSKRLRSAV 1588
            AE +T+EM+EEVMELL+LFG+P++VAPMEAE+QC +LE+L LV+G VTDDSDAF FG   VYKNIF+++KYVEAYL  DA +++G+G +E + LALLLGSDYT+GVRGVGIVNAME++ AFP   +    GL  F+ W+D ++P+ D     L +          +   +F  KHK AR RWTV  GFP + V+  Y  PQV+ S+E F W AP++ G++  C  ++GW   ++D +L+P++ +L +    Q R+D Y++TYHDN R A I+S RL  AV
Sbjct:  555 AEHITDEMREEVMELLRLFGIPFLVAPMEAESQCAMLEELGLVEGVVTDDSDAFLFGAETVYKNIFDDKKYVEAYLAEDARREIGIGRQEFVCLALLLGSDYTDGVRGVGIVNAMEIMEAFPPAAENPLEGLRGFKNWLDSYNPVDDA----LGRQADAPPEGASAARKRFEDKHKGARRRWTVGNGFPERAVVAGYLQPQVNTSQERFRWTAPDLSGIRRFCGELMGWTGEETDRILLPVIAKLRETD-GQRRLDSYYLTYHDNTRFAKIRSSRLEKAV 829          
BLAST of mRNA_C-linearis_contig10.491.1 vs. uniprot
Match: A0A836CHS7_9STRA (XPGI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHS7_9STRA)

HSP 1 Score: 287 bits (735), Expect = 2.000e-79
Identity = 158/321 (49.22%), Postives = 202/321 (62.93%), Query Frame = 0
Query: 1309 AETVTEEMKEEVMELLKLFGVPYVVAPMEAEAQCCVLEQLKLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEKDLGVGTEEVIALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHG--LSKFRKWIDGFDPLLDQELEELT----KHGSE-KEIDGLSPEMKFHLKHKTARNRWTVPEGFPSKEVINAYNSPQ---------------VDKSEEPFSWAAPEID----------GLQALCQRVLGWDRVQSDGLLMPMVKELDKAGFSQPRIDRYFMTYHDNRRVAAIKSKRLRSAVEDLANGPTE 1597
            AETVT+EM +EV ELL L GVPY+VAPMEAEAQC  LE+L LVDG VTDDSDAF FG +AVYKNIF ++KYVEAYLLPD   + G+ T  + ALALL+GSDYT G++ VG+VNAME++ AFPL    A     L +F++W+DGFDPL D +LE+      + G E +E +G++   +FHLKH++ARNRW     FPS+EV+ AY  PQ               V  + E F W                 L+ LC  VLGW R Q++ LL P++  L    F QPR+D Y+ +YH N R A I+S RLR AV +L+    E
Sbjct:  174 AETVTQEMLDEVKELLHLLGVPYLVAPMEAEAQCVELERLGLVDGIVTDDSDAFVFGAKAVYKNIFEDQKYVEAYLLPDITAEFGISTPHLRALALLMGSDYTLGIKNVGLVNAMEIVRAFPLRAGEASPAPALRRFKEWLDGFDPLGDAQLEKRVARAIREGPEAEEREGVTLAQRFHLKHRSARNRWIASPSFPSEEVLRAYEKPQAAAAAIDASLAEQLLVTSNAEAFEWVXXXXXXXXXXXXXXAALRRLCDEVLGWPRGQTEALLDPVMARLKDRSF-QPRLDSYYTSYHANARFAKIRSMRLRQAVAELSGREPE 493          
BLAST of mRNA_C-linearis_contig10.491.1 vs. uniprot
Match: G4ZC44_PHYSP (XPGI domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZC44_PHYSP)

HSP 1 Score: 282 bits (721), Expect = 2.770e-79
Identity = 147/297 (49.49%), Postives = 197/297 (66.33%), Query Frame = 0
Query: 1310 ETVTEEMKEEVMELLKLFGVPYVVAPMEAEAQCCVLEQLKLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEKDLGVGTEEVIALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKFRKWIDGFDPLLDQEL---EELT--KHGSEKEIDGLSPEMKFHLKHKTARNRWTVPEGFPSKEVINAYNSPQVDKSEEPFSWAAPEIDGLQALCQRVLGWDRVQSDGLLMPMVKELDKAGFS-----QPRIDRYFMTYHDNRRVAAIKSKRLRSAVEDLANGPT 1596
            E +T++M  EVM LL+LFGVP++V+PMEAEAQC  LEQL LVDG +TDDSD F FGG+ VYKNIF+ +K+VEA+   D E++LG   E++IALALLLGSDYT+GVRG+GIVNA E+  A+P        GL +F++W+  FD   + E    EEL     G+ +E D  +   +F   H T R +W + + FPSK+V+ AY SPQVD+SE  FSW+AP++  L+  C    GWD+ +SDG+L+P+ ++  KA  S     Q R+DR+F +Y D    A IKSKRLRSAV       T
Sbjct:  203 EGITDDMVAEVMALLRLFGVPFLVSPMEAEAQCAALEQLGLVDGVITDDSDIFPFGGQRVYKNIFHHQKFVEAFSARDIERELGFSREQIIALALLLGSDYTDGVRGIGIVNATEIAAAYP-----GIEGLREFKEWVREFDVAKEAERKTGEELDGDSEGNSEEDDVETARERFQRSHTTVRRKWELGDEFPSKQVVQAYMSPQVDRSEARFSWSAPDLSALRNYCANAFGWDQQKSDGVLLPLEEKAKKAATSGSRHIQTRLDRFFTSYDDQVHYAQIKSKRLRSAVNQRTGSKT 494          
BLAST of mRNA_C-linearis_contig10.491.1 vs. uniprot
Match: W7TX36_9STRA (Dna repair enzyme n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TX36_9STRA)

HSP 1 Score: 291 bits (745), Expect = 4.660e-79
Identity = 159/315 (50.48%), Postives = 209/315 (66.35%), Query Frame = 0
Query: 1309 AETVTEEMKEEVMELLKLFGVPYVVAPMEAEAQCCVLEQLKLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEKDLGVGTEEVIALALLLGSDYTEGVRGVGIVNAMEVINAFPL--EGKGA--------HHGLSKFRKWIDGFDPLLD-------------QELEELTKHGSE-----KEIDGLSPEMK-FHLKHKTARNRWTVPEGFPSKEVINAYNSPQVDKSEEPFSWAAPEIDGLQALCQRVLGWDRVQSDGLLMPMVKELDKAGFSQPRIDRYFMTYHDNRRVAAIKSKRLRSAVEDLANG 1594
            AETV++EM+E++M LL+LFGVPY+VAPMEAEAQC VLE L LVDG V+DDSD+F FG RAVYKNIF+ERKYVEAY   D E++LG+   ++++LALLLGSDYTEGV+GVGIVNAMEV+ AF    EG+G           GL  F+ W+DGFDPL D             +E E + K G E     +    ++ E++ FH KHK+AR RW V E FP   +  AY  PQV+ S + F+W  P++DGL+    + LGW   ++D  L+PM++ + +  + Q R+D YF+ Y DN + A IKSKRL+ AV DL  G
Sbjct:  378 AETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDSFLFGARAVYKNIFDERKYVEAYRAEDLERELGLKRVDLVSLALLLGSDYTEGVKGVGIVNAMEVVRAFAPREEGEGETEVRGGKPEEGLQHFKAWLDGFDPLGDLSLRADRKLVDDREEDEAVDKAGEEGGSTRRRAAWVTQEVEAFHSKHKSARTRWVVTERFPDPAIYRAYLQPQVNASTDSFTWGVPDLDGLRVHLAQKLGWPVSETDSHLLPMLRRMQETVW-QSRLDSYFLGYQDNVKFAKIKSKRLQRAVADLKPG 691          
BLAST of mRNA_C-linearis_contig10.491.1 vs. uniprot
Match: A0A7S0UIJ3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UIJ3_9STRA)

HSP 1 Score: 287 bits (734), Expect = 5.310e-79
Identity = 148/287 (51.57%), Postives = 195/287 (67.94%), Query Frame = 0
Query: 1312 VTEEMKEEVMELLKLFGVPYVVAPMEAEAQCCVLEQLKLVDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEKDLGVGTEEVIALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKFRKWIDGFDPLLDQELEELTKHGSEKEIDGLS-PEMKFHLKHKTARNRWTVPEGFPSKEVINAYNSPQVDKSEEPFSWAAPEIDGLQALCQRVLGWDRVQSDGLLMPMVKELDKAGFSQPRIDRYFMTYHDNRRVAAIKSKRLRSAVEDLANGPTE 1597
            VTEEM+ EVM+LL+LFG+PYVVAP EAEAQC  LE+L LVDG VT+DSD F FGG+ VYKNIF+++KYVE Y   DA +++ +  + +IALA+LLG DYTEGV+GVGIVN MEV+ AF +  +    GL +FRKW+DGFDP  DQ     +K G+  EI   S  E  FH KH TAR RW  P+ FP  +V+NAY +P VD S E FSW  P++DGL A C   +GW   +++ L++P++++++     Q RID  FM Y D  + A I+SKRLR  +   +N   E
Sbjct:  255 VTEEMRTEVMQLLRLFGIPYVVAPAEAEAQCVELERLGLVDGIVTEDSDTFVFGGQVVYKNIFDDKKYVEVYHTKDASEEMNLTQDSLIALAMLLGGDYTEGVKGVGIVNGMEVLQAFDVA-QDCEEGLKRFRKWLDGFDPF-DQ-----SKKGATPEIANRSVQEQVFHRKHHTARTRWIAPKHFPDAKVLNAYRNPVVDTSTERFSWGIPDLDGLIAFCHGHMGWVAEETERLILPIIRQMEDGSMRQTRIDS-FMRYEDGIKFAKIQSKRLRHVLGLKSNAEEE 533          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXJ8_9PHAE0.000e+051.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZY4_ECTSI0.000e+052.90DNA repair enzyme n=1 Tax=Ectocarpus siliculosus T... [more]
B8C7S2_THAPS3.850e-8651.24DNA repair enzyme (Fragment) n=1 Tax=Thalassiosira... [more]
A0A7S4MZJ3_9STRA1.870e-8150.52Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2LMT5_9STRA4.750e-8047.70Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2WUF9_9STRA8.930e-8050.36Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A836CHS7_9STRA2.000e-7949.22XPGI domain-containing protein n=1 Tax=Tribonema m... [more]
G4ZC44_PHYSP2.770e-7949.49XPGI domain-containing protein (Fragment) n=1 Tax=... [more]
W7TX36_9STRA4.660e-7950.48Dna repair enzyme n=2 Tax=Nannochloropsis gaditana... [more]
A0A7S0UIJ3_9STRA5.310e-7951.57Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1288..1315
NoneNo IPR availableCOILSCoilCoilcoord: 797..822
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..133
e-value: 5.3E-30
score: 106.4
NoneNo IPR availablePANTHERPTHR16171FAMILY NOT NAMEDcoord: 1..1705
NoneNo IPR availablePANTHERPTHR16171:SF7DNA REPAIR PROTEIN RAD2coord: 1..1705
IPR001044XPG/Rad2 endonuclease, eukaryotesPRINTSPR00066XRODRMPGMNTGcoord: 97..119
score: 26.96
coord: 2..19
score: 44.44
coord: 54..77
score: 58.33
IPR006084XPG/Rad2 endonucleasePRINTSPR00853XPGRADSUPERcoord: 242..262
score: 23.81
coord: 24..38
score: 51.25
coord: 72..91
score: 51.09
IPR008918Helix-hairpin-helix motif, class 2SMARTSM00279HhH_4coord: 1396..1429
e-value: 7.1E-8
score: 42.2
IPR006085XPG N-terminalSMARTSM00485xpgn3coord: 1..98
e-value: 9.7E-40
score: 148.0
IPR006085XPG N-terminalPFAMPF00752XPG_Ncoord: 1..97
e-value: 6.6E-27
score: 93.9
IPR006086XPG-I domainSMARTSM00484xpgineucoord: 1325..1394
e-value: 3.2E-26
score: 103.1
IPR006086XPG-I domainPFAMPF00867XPG_Icoord: 1325..1409
e-value: 5.5E-22
score: 77.9
IPR019974XPG conserved sitePROSITEPS00841XPG_1coord: 70..84
IPR019974XPG conserved sitePROSITEPS00842XPG_2coord: 1328..1342
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILY478075' to 3' exonuclease, C-terminal subdomaincoord: 1396..1567
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 2..1409

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1348261..1373107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.491.1mRNA_C-linearis_contig10.491.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1347830..1373344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.491.1 ID=prot_C-linearis_contig10.491.1|Name=mRNA_C-linearis_contig10.491.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1882bp
MGINNLWQLLSPVGRSVSIETLAGKTLAVDVSIWLTQFIKAMRDDDGKVT
KNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKGRTLAARRKLRSEGTD
SSVRKTAQRILASQLKKHKNAISAAKRASFQAAPVAFNPVYQNPGGDVPP
AAAAAAAAPTAASEEKTVDADPGAGAEAGVAEVGGKDDDDDDDGVDWEEQ
EADRGDGGRALDAGRQAVVDSDGDEAAAAQGTSGGAAAGAASRGRGAADA
AVGGDDDLAAWGVDTDDDDETGSVGWEEVELPERNEDIDPEVIACLPDHV
KKQVIEAAKRRQRMRSRAQYMPVAGNPAMYSQTQLSNFLRAKQLNSQILK
AQKQEDGEREGKRIASEAGRRYIMTAAGTSGGGGGSRGSRSPRKEPPTAG
SSSKRPRRITDDGDGFKEWSYAPETGVDTGVQKTGGGAPAAAAISEWKPP
DGEEDDDDEEAGGFLPASEDEEDAPGKRKSTSSSGKGRSRESYPGDHGGD
DADGDGDDGGGGGFLEVSEEEEEEEEEEEGEGVGGKRRASGKGPLSAARP
KPIGHDLPRPRGGKGGERRLQRLGDTADFDDEEEEGEGEEEKHAGSGVHQ
PSAQQDSESADTVARMLQEEEDRRAALAVQNGMDAPAAVLAGDGDDGHGD
DPAAVADDVDNSLDPLGLLSSASRRKLSPGSPGGVTVGPGDGDAADKRAV
HGTAPSKLLTSGGGRGGQGSAEGRGPVDDAEIELEIDLKDLESGGGGGGG
MGGPPGLVSLFSTGAGDGGGLRARAGSGAAKEEDSDEDFDGFVDDDGGDE
KEEEKEEEEEEEEEEEELERGRFSSTTSSQGATTNVTNEEALQRSVDVAS
RMAGWAGRVVERVLKEHRQPAASSASAAGSSSFRTARANSSSRAAAAHSI
PAFGPVCTGPAASGVGSHAAAQAASEERRRLKESANASGGGESSGHSGGS
TRLPVSGGGTSSSPPSYKTGEGARRERRLGAGATGAGGAGGADGGGYGGY
GGYGGVFVSSSEEDNLADSASLPAGRDGPAMDGKSSVSRDGVLAVSSAPA
GGKEFEGQGGGGPAVSEAVPKAQAESPATKGVVSTAGGDKCSTVQGAHSV
ATAGSGESAAAAGESRRTADKEGQHSADEKPRERGGSGAPGLPLPSSTAS
PSTAQGSAAAGGGALAGVASARPTEAATAAAPGFGKEDSEDAEKVVRFAG
TGEGEDPAASDTPAGSASALQENTSDVPPLGGDDFADTESGTGVLFQPSM
PAAQEEPEEQGGFVGGGGGGGGGGESLPSSAYLGDMDEDELARESDRLKR
ESNRARRDAETVTEEMKEEVMELLKLFGVPYVVAPMEAEAQCCVLEQLKL
VDGTVTDDSDAFAFGGRAVYKNIFNERKYVEAYLLPDAEKDLGVGTEEVI
ALALLLGSDYTEGVRGVGIVNAMEVINAFPLEGKGAHHGLSKFRKWIDGF
DPLLDQELEELTKHGSEKEIDGLSPEMKFHLKHKTARNRWTVPEGFPSKE
VINAYNSPQVDKSEEPFSWAAPEIDGLQALCQRVLGWDRVQSDGLLMPMV
KELDKAGFSQPRIDRYFMTYHDNRRVAAIKSKRLRSAVEDLANGPTEVIT
VVDDDSSAGKAKSTTPKAKKAKNNKTAAASTKPPSTAAAAAGPPNNKHGD
LSASEAEEGDENGDAPSAKKRRRKAGGSSSQTAAAAEDDGEESPEEISNT
PSSSSPSSPASGEAPRAERGRPSATRADKKGSVAAASSGGRSRRSTRTKT
TAAPAGNGSSASASSGGNGRGSAGKRPARRGKAGGGDGADAAAAAVSPAG
KRRRPRRSAASSGGASGVGAGVGDELLLGDEADGSGFEREEGVDEDDDPD
FSGGSSGGGSSDEGGDVVVRSGRRRTKGRRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001044XPG/Rad2_eukaryotes
IPR006084XPG/Rad2
IPR008918HhH2
IPR006085XPG_DNA_repair_N
IPR006086XPG-I_dom
IPR019974XPG_CS
IPR0362795-3_exonuclease_C_sf
IPR029060PIN-like_dom_sf