mRNA_C-linearis_contig10.483.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig10.483.1
Unique NamemRNA_C-linearis_contig10.483.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig10.483.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 4.120e-88
Identity = 205/482 (42.53%), Postives = 270/482 (56.02%), Query Frame = 2
Query:  110 RP*RRSVRAIHETVETVKSNREELTALGVRCAYVMACVIVKCRQPQLG-MHVTPLEDCVEAVGEVVKRCGRRGRVSRVFKASSDKHEIAGLNARVDRLAGNLGLAGIAVLKGKADGMKAMLRHAAKPPALTTRPVLCCPRSWVLGHLKTKPVKLANIPKSTPARKSWHVERNHVMKAVFEVLTGEGAPRLVGLVSNSGSGKTTAASEIVRSPDIREVFSDGIVWLTVNASAIERLPASMTRLARMVYEDIGGSTGDPSNASEDGTAYVKSNMERGHGGKGFRCLLVADNVWEKWSQSYWRP-DCGF----SCRP---VMASWCQV*MGRL*VWTSFPREMRSRC*EERQIYLPRFACPTVQW---I*SSCAAAWRWISRLLGDGAPCEVDKTGRLGRMRLARSGQRWVRSWAVLETIDGVGPFSKPAS-NTLPLGRTMSEYSGFTYRSP*YRTVRAFTLMDAAVLLYDRQPSP*DEASGRGV 1516
            RP  +++ AI ETVE V++N+EEL  L  RC Y+ ACV+VK RQ     M +TP+E+C+EA GE+V+RCG RG+++RV  ASSDK EIA + A +  L  +L LAG+A+L+GK   + AM+       A T   +L    S ++  L   P KLA IPK+TP RKSWHVER +VM+ VFE LT  G P LVGLV +SGSGKTTAASEIVRS ++R+ FSDG+VWLTVN  A +RLP+ M +LA M+ E++GG    P+  S+DG AY+K  M+RGHGGKG +CL+VADNVWEK  +  W+  + G     S R    V+ S  +V              +R       +  LP  A   ++    +    A   RW +           D  G++        G+R   S  V+ET D        A    L  G                   R FT+ DAAVLLYDR+PS  DEAS  GV
Sbjct:   48 RPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTES-IIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVGGRR--PA-TSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEK--EVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERV--SGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGV 521          
BLAST of mRNA_C-linearis_contig10.483.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 9.040e-83
Identity = 203/492 (41.26%), Postives = 257/492 (52.24%), Query Frame = 2
Query:  122 RSVRAIHETVETVKSNREELTALGVRCAYVMACVIVKCRQPQLGMHVTPLEDCVEAVGEVVKRCGRRGRVSRVFKASSDKHEIAGLNARVDRLAGNLGLAGIAVLKGKADGMKAMLRHAAKPPALTTRPVLCCPRSWVLGHLKTKPVKLANIPKSTPARKSWHVERNHVMKAVFEVLTGEGAPRLVGLVSNSGSGKTTAASEIVRSPDIREVFSDGIVWLTVNASAIERLPASMTRLARMVYEDIGGSTGDPSNASEDGTAYVKSNMERGHGGKGFRCLLVADNVWEKWSQSYWRPDCGFSCRPVMASWCQV*MGRL*VWTSFPREMRSRC*EERQIYLPRFACPTVQWI*SSCAAAWRWISRLLGDGAPC---------EVDKTGRLGRMRLARSGQRWVRSWAVLET-IDGVG--PFSKPASNTLPLGRTMSEYSGF---TYRSP*YRTVR------------AFTLMDAAVLLYDRQPSP*DEASGRGV 1516
            ++++AI  TVETVK+NREEL AL  RC Y+ AC +VKCR  +  + V PL+DCVEA     +RC RRG+VSRV KA SDK EIAGLN+ VDRL  +LGLAGIAVL+GK D MK  L    +        +   PRS+          KLA +P   P RKSWHVER H M  V + L G     +V L   SGSGKTT A+EIVRS ++RE FSDGIVWL VN  A +RLP+ M +LARMV+E+IGGS G   +ASED   Y+K  +E GH G+  +CL+VADNVWE+                V++   +  M  L          RSR    + + +   +    + +    A   R  SRL  D             +V   GR   +R       W  + + + T ++ VG  P +  A N     R      GF      S   R  R            AF+L DAAVLLYDR PS  DEAS  GV
Sbjct:   45 KTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIESEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQR-------LESLPRSFG---------KLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEE---------------DVVSKLVETGMWVLLSTRDEAVVKRSR---GKAVVVDELSQADAESVLKRAAELPR-ESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGV 501          
BLAST of mRNA_C-linearis_contig10.483.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 293 bits (750), Expect = 1.870e-82
Identity = 150/267 (56.18%), Postives = 184/267 (68.91%), Query Frame = 2
Query:  185 ALGVRCAYVMACVIVKCRQPQLGMHVTPLEDCVEAVGEVVKRCGRRGRVSRVFKASSDKHEIAGLNARVDRLAGNLGLAGIAVLKGKADGMKAMLRHAAKPPALTTRPVLCCPRSWVLGHLKTKPVKLANIPKSTPARKSWHVERNHVMKAVFEVLTGEGAPRLVGLVSNSGSGKTTAASEIVRSPDIREVFSDGIVWLTVNASAIERLPASMTRLARMVYEDIGGSTGDPSNASEDGTAYVKSNMERGHGGKGFRCLLVADNVWEK 985
            AL  RC Y+  CVIV+CR+   G+  TPL +CV AVG  V+RC RRG +SRV KA+ DK EIAGL  R++ L G+L LAGIA + GK + +KA+L H     AL+    L      +   +   P  LA +P  TPARKSWHVER HVM+AV + L GEG PRLVGLV +SGSGKTTAA+EIVRS ++RE FSDGIVWL+VN  A ERL A M  LAR+V+EDIGGS G      +DG AY +  M+ GHGGKG +CL+VADNVWE+
Sbjct:   52 ALYQRCTYITGCVIVRCRKGSSGLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLAN-HDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEE 317          
BLAST of mRNA_C-linearis_contig10.483.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 5.520e-73
Identity = 192/492 (39.02%), Postives = 246/492 (50.00%), Query Frame = 2
Query:  122 RSVRAIHETVETVKSNREELTALGVRCAYVMACVIVKCRQPQLGMHVTPLEDCVEAVGEVVKRCGRRGRVSRVFKASSDKHEIAGLNARVDRLAGNLGLAGIAVL--------KGKADGMKAMLRHAAKPPALTTRPVLCCPRSWVLGHLKTKPVKLANIPKSTPARKSWHVERNHVMKAVFEVLTGEGAPRLVGLVSNSGSGKTTAASEIVRSPDIREVFSDGIVWLTVNASAIERLPASMTRLARMVYEDIGGSTGDPSNASEDGTAYVKSNMERGHGGKGFRCLLVADNVWEK------WSQSYWRPDCGFSCRPVMASWCQV*MGRL*VWTSFPREMRSRC*E-ERQIYLPRFACPTVQW---I*SSCAAAWRWIS------RLLGDGAPCEVDKTGRLGRMRLARSGQ---RWVRSWAVLETIDGVGPFSKPASNTLPLGRTMSEYSGFTYRSP*YRTVRAFTLMDAAVLLYDRQPSP*DEASGRGV 1516
            R++R I E VETVK N E+LT L  RC Y+ AC IVKCR     + V PLEDCV AV + V+R  +RG++SRV KA  DK +I  L  R+  L G+L LAGIA L        K  +    A      K        +L    + +L  L   P K+AN+PK TP  KSWHVER +V + VF+ L  +G P LVGLV +SG+GKTTAAS IV S  +RE FSDGIVWL VN    + LP  M +LA+MV+EDIGGS G   + S+DG AYVK  +E GHGGKG +CL+VADNVWE            W          V  +  +V +G   +  +    +  R  E   +  LP  A   ++    +    A   RW +      R     A C+V      G +    +G    R  R  A+L+               L +G                    AFT+ DAAVLLYDR+P   DEAS  GV
Sbjct:   45 RTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYTELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTET-ILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEV-VGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQA----------GFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGV 524          
BLAST of mRNA_C-linearis_contig10.483.1 vs. uniprot
Match: D7G5K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K4_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 1.370e-71
Identity = 137/271 (50.55%), Postives = 175/271 (64.58%), Query Frame = 2
Query:  122 RSVRAIHETVETVKSNREELTALGVRCAYVMACVIVKCRQ---PQLGMHVTPLEDCVEAVGEVVKRCGRRGRVSRVFKASSDKHEIAGLNARVDRLAGNLGLAGIAVLKGKADGMKAMLRHAAKPPALTTRPVLCCPRSWVLGHLKTKPVKLANIPKSTPARKSWHVERNHVMKAVFEVLTGEGAPRLVGLVSNSGSGKTTAASEIVRSPDIREVFSDGIVWLTVNASAIERLPASMTRLARMVYEDIGGSTGD-PSNASEDGTAYVKSNM 922
            +++ A+ ETVETV+ NR+EL AL  RC Y+ A VIVK RQ   P  G+ VTPL+DCV    +  +RC +R     + KA S K E+A LNAR+DRL G+LGLAGIA + G+   +K M+           +  L   +  V+  L   P K A+IP+ TP RKSWHVER HVM  V E LTGE  P LVGLV +SG+GKTTAASE+V S  +RE FSDGIVWL VN  A +RLP+ M +LARMV+EDIGG  G  P+ + ++  AY+K  M
Sbjct:   46 KTLTAMRETVETVQQNRDELAALEKRCTYMTASVIVKFRQIPQPGSGLDVTPLKDCVVVAEKFAERCKKRRMRWEIVKAFSVKDELATLNARIDRLVGDLGLAGIATVLGEVADLKGMMLEQMVSDQAAAQKELLANQEIVIDRLPKPPTKKADIPQGTPMRKSWHVERRHVMDTVVEALTGEAGPHLVGLVGDSGAGKTTAASELVGSNVVRESFSDGIVWLAVNYGANKRLPSLMLQLARMVHEDIGGCVGGRPNESGDNADAYIKQRM 316          
BLAST of mRNA_C-linearis_contig10.483.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 3.000e-65
Identity = 180/471 (38.22%), Postives = 236/471 (50.11%), Query Frame = 2
Query:  167 NREELTALGVRCAYVMACVIVKCRQPQLG-MHVTPLEDCVEAVGEVVKRCGRRGRVSRVFKASSDKHEIAGLNARVDRLAGNLGLAGIAVLKGKADGMKAMLRHAAKPPALTTRPVLCCPRSWVLGHLKTKPVKLANIPKSTPARKSWHVERNHVMKAVFEVLTGEGAPRLVGLVSNSGSGKTTAASEIVRSPDIREVFSDGIVWLTVNASAIERLPASMTRLARMVYEDIGGSTGDPSNASEDGTAYVKSNMERGHGGKGFRCLLVADNVWEKWSQSYWRPDCGFSCRPVMAS-WCQV*MGRL*VWTSFPRE---------------MRSRC*EERQIYLPRFACPTVQW---I*SSCAAAWRWISRLLGDGAPCEVDKTGRLGRMRLARSGQRWVRSWAVLETIDGVGPFSKPAS-NTLPLGRTMSEYSGFTYRSP*YRTVRAFTLMDAAVLLYDRQPSP*DEASGRGV 1516
            N+EEL  L  RC ++  CVIVK RQ     M V+P+E+C+EA GE+V+RCG RG+++RV  ASSDK +IA + A +  L  NL LAG+A+L+GK   ++A +   AK  A  T+ V+      +   L   P K A IPKSTP  KSWHVER  V++ VFE LT +G P LVGLV +SGSGKTTAASEIVRS +                   +RLP+ M +LA MVYE+IGG    P+  S+DGTAY+K  M RGHGG+G +CL V DNVWEK             C  + A  W  +      + T +  E               +R       +  LP  A   ++    +    A   R +S + G        K     R  +++     VR   V+ET D        A    L +G                   R FT+ DAAVL+YDR PS  DEAS  GV
Sbjct:   41 NQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQA-ATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNE-------------------DRLPSLMLQLAHMVYEEIGGRR--PA-TSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEK----------EVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGR-LSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRG-TVVETRDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAGV 476          
BLAST of mRNA_C-linearis_contig10.483.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 1.310e-56
Identity = 128/286 (44.76%), Postives = 161/286 (56.29%), Query Frame = 2
Query:  137 IHETVETVKSNREELTALGVRCAYVMACVIVKCRQPQLGM--HVTPLEDCVEAVGEVVKRCGRRGRVSRVFKASSDKHEIAGLNARVDRLAGNLGLAGIAVLKGKADGMKAMLRHAAKPPALTTRPVLCCPRSWVLGHLKTKPVKLANIPKSTPARKSWHVERNHVMKAVFEVLTGEGAPRLVGLVSNSGSGKTTAASEIVRSPDIREVFSDGIVWLTVNASAIERLPASMTRLARMVYEDIGGSTGD-PSNASEDGTAYVKSNMERGHGGKGFRCLLVADNVWEK 985
            + ETVETV   R+EL AL  RC Y+ AC+I K R    G   +V+PLEDCV    + V+R  +R                                            M+ M+++ A       R  L   +  ++  L   P+K A +P+ TP RKSWHVER HV + V E LTGE  PRLVGLV +SG+GKTTAA+E+VRS  +RE FSDGIVWLTVN  A +RLP+ M +LARMV EDIGG  G  P+ +  +  AY+K  ME GHGGKG +CL VADNVWEK
Sbjct:    1 MRETVETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAEKFVERRKKRT-------------------------------------------MEQMVQNQA-----AARKELLANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVER-HVTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEK 237          
BLAST of mRNA_C-linearis_contig10.483.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 3.570e-52
Identity = 114/159 (71.70%), Postives = 125/159 (78.62%), Query Frame = 1
Query:  982 EVVSKLLETRLWILLSTRDGLLVSGVDGEAVGVDELSEGDAESLLRRTADLPPEVRLPDGAVDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAASKVRAAMGAVVGGFGD---------DRRRWAILQAGFEYLALGSDDERVQRLYLSLAVIPDG 1431
            EVVSKLLET +W+LLSTR+  LV+   GE VGVDELSE DA S+LRR A+LPP+ ++P  AVDLIELCGRVAMDLAFVGRWSTVRGRQDR AWSDA SKVR  MG V  G GD         D RR AIL+AGFE LA+GSDDERVQRLYLSLAV PDG
Sbjct:  173 EVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKV--GSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDG 329          
BLAST of mRNA_C-linearis_contig10.483.1 vs. uniprot
Match: A0A6H5KRI5_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI5_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 2.080e-37
Identity = 75/141 (53.19%), Postives = 92/141 (65.25%), Query Frame = 2
Query:  563 KLANIPKSTPARKSWHVERNHVMKAVFEVLTGEGAPRLVGLVSNSGSGKTTAASEIVRSPDIREVFSDGIVWLTVNASAIERLPASMTRLARMVYEDIGGSTGDPSNASEDGTAYVKSNMERGHGGKGFRCLLVADNVWEK 985
            K A +P     RKSWHVER HVM  V + L G     +V L   SGSGKTT A+EIVRS ++RE FSDGI WL V   A ERLP+ M +LAR V+E+IGGS G   +ASED   Y+K  +E G   +G +CL+VADNV E+
Sbjct:   21 KQAAVPIGAHVRKSWHVERRHVMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSAEVREAFSDGIAWLPVYQGAKERLPSLMLQLARKVHEEIGGSVGRVPSASEDSATYIKQRLEEGDKSRGLKCLVVADNVREE 161          
BLAST of mRNA_C-linearis_contig10.483.1 vs. uniprot
Match: A0A6H5KMQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ3_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 2.960e-27
Identity = 67/144 (46.53%), Postives = 92/144 (63.89%), Query Frame = 2
Query:  122 RSVRAIHETVETVKSNREELTALGVRCAYVMACVIVKCRQPQLGMHVTPLEDCVEAVGEVVKRCGRRGRVSRVFKASSDKHEIAGLNARVDRLAGNLGLAGIAVLKGKADGMKAMLRHAAKPP----ALTTRPVLCCPRSWVLG 541
            +++ AI E V+TV SNRE+L ALG RC Y+ ACVIVK R+    + V PLEDC+ A G +V+ CGRRG++ RV KASSD+ EIA LN R+  L  ++GLAGI V+  K D +K ++      P    ++ +R       SW+LG
Sbjct:  143 KTLTAIREKVKTVISNREDLAALGERCVYITACVIVKFRKGSSELDVAPLEDCIRAAGVLVEHCGRRGKLLRVLKASSDRGEIAALNTRIRALESDMGLAGITVVGRKIDDLKTIVVSCILDPMAEYSVASRRRALLVNSWLLG 286          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FZY7_ECTSI4.120e-8842.53NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FZW8_ECTSI9.040e-8341.26NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KLK9_9PHAE1.870e-8256.18NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KRK8_9PHAE5.520e-7339.02NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7G5K4_ECTSI1.370e-7150.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJ30_9PHAE3.000e-6538.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J759_9PHAE1.310e-5644.76NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KYW3_9PHAE3.570e-5271.70NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KRI5_9PHAE2.080e-3753.19NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KMQ3_9PHAE2.960e-2746.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1186917..1190142 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score190.7
Seed ortholog evalue1e-45
Seed eggNOG ortholog2880.D7FZW8
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons4
Model size2591
Cds size897
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.483.1prot_C-linearis_contig10.483.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig10 1188959..1190022 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927332.900813-UTR-C-linearis_contig10:1186916..11873851622927332.900813-UTR-C-linearis_contig10:1186916..1187385Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 1186917..1187385 +
1690879631.9148254-UTR-C-linearis_contig10:1186916..11873851690879631.9148254-UTR-C-linearis_contig10:1186916..1187385Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 1186917..1187385 +
1622927332.9160573-UTR-C-linearis_contig10:1187705..11877681622927332.9160573-UTR-C-linearis_contig10:1187705..1187768Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 1187706..1187768 +
1690879631.9321823-UTR-C-linearis_contig10:1187705..11877681690879631.9321823-UTR-C-linearis_contig10:1187705..1187768Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 1187706..1187768 +
1622927332.928914-UTR-C-linearis_contig10:1187916..11889581622927332.928914-UTR-C-linearis_contig10:1187916..1188958Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 1187917..1188958 +
1690879631.9418132-UTR-C-linearis_contig10:1187916..11889581690879631.9418132-UTR-C-linearis_contig10:1187916..1188958Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 1187917..1188958 +
1622927332.960527-UTR-C-linearis_contig10:1190022..11901421622927332.960527-UTR-C-linearis_contig10:1190022..1190142Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 1190023..1190142 +
1690879631.9674437-UTR-C-linearis_contig10:1190022..11901421690879631.9674437-UTR-C-linearis_contig10:1190022..1190142Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 1190023..1190142 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927332.9396684-CDS-C-linearis_contig10:1188958..11893211622927332.9396684-CDS-C-linearis_contig10:1188958..1189321Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 1188959..1189321 +
1690879631.950564-CDS-C-linearis_contig10:1188958..11893211690879631.950564-CDS-C-linearis_contig10:1188958..1189321Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 1188959..1189321 +
1622927332.949177-CDS-C-linearis_contig10:1189488..11900221622927332.949177-CDS-C-linearis_contig10:1189488..1190022Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 1189489..1190022 +
1690879631.959003-CDS-C-linearis_contig10:1189488..11900221690879631.959003-CDS-C-linearis_contig10:1189488..1190022Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 1189489..1190022 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.483.1

>prot_C-linearis_contig10.483.1 ID=prot_C-linearis_contig10.483.1|Name=mRNA_C-linearis_contig10.483.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=299bp
MHDAHLNFARKHLVDRGDVRRPVLVRWAKYISSLDTLRSIDQDVLKGLWL
AVERVGEDGWDICRPYEAALAEIDELDPLLRESIETVGCFQEAQGDWKRA
TTTWSRLVEVEKRQLGPAQPYDADGLNSLAETMLRLTPDDRDEAEKLLRL
SLGTHEAKLGPEDLEVADTLYRLSACVRAAGRLEEAEQLLGRCLAIEEAK
LGRKDVRVACMRYLPGVLVQAAERLEEAEELSRRCLAIQEAKLGPDDVQV
AFTLCVREAGRLEEAKALLRRCLAIEETKVGPEDVQAVVTLYQLGVCV*
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mRNA from alignment at C-linearis_contig10:1186917..1190142+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.483.1 ID=mRNA_C-linearis_contig10.483.1|Name=mRNA_C-linearis_contig10.483.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3226bp|location=Sequence derived from alignment at C-linearis_contig10:1186917..1190142+ (Chordaria linearis ClinC8C monoicous)
AGCGATGCCGGAGCGCAGGCCGCCAATCTCGCGCTGAAGATAGGCTCCTC TGCAGCGGACGCGAACTCGTTCGCGGCAGAAATAGGGCAGGAGCTGCCGT TCATCAGCCCGGCCTTGAAGACGCTCAGTCAGGGCCATCCACGAGACGGT CGAGACCGTGAAAAGCAACCGGGAGGAACTGACGGCGCTGGGAGTGCGGT GTGCGTACGTCATGGCATGTGTCATAGTCAAGTGCCGGCAACCCCAGCTC GGGATGCATGTGACTCCGCTCGAGGACTGTGTTGAGGCAGTGGGGGAAGT TGTCAAGCGTTGCGGCAGGCGAGGAAGGGTGTCGAGGGTTTTCAAGGCCT CCAGCGACAAGCACGAAATCGCTGGATTGAACGCACGTGTCGACCGTCTG GCGGGAAACTTGGGTCTGGCGGGCATTGCCGTCCTCAAGGGGAAGGCGGA CGGCATGAAGGCGATGTTGGTGAGTTCCTTATGACGATGACCTTTTCTCT TCGCCACCGTGCTTGGAAAATCCCCCACGACTGAAGGTCGATGCACTCGG TGCCTGTGGATGCTGGGTACGGTTCTTTGAACATCGTTTTGGCACAATAC TGCATGCAGCTGTTCCGTGGTCAATGCTACACAAAGGAAGCAGTCTTGGA AAATGGTAAGCCCATTTCCTTGTACGAGGAAAATGCAACATCAATCGTGA GGCAACGCATGAGCTATCGGTCCAGGAAAGCCTCTCGTACCCTTCTTACA GTTCAAAGCAAGCACCCTTTAAGTTCATTCTACGCGCAGCGACATGCAGC AAAACCCCCGGCACTAACAACGCGTCCTGTACTCTGTTGTCCTCGCTCAT GGGTGCCAGAGCATATACGAAGTACAACAATATCATCTGGGTCAAACCGA AATAAAACGCTTCAGACCCGCGTTCAACGGTCTCTGACCCACCTATTTGG TCGGTGCTGATCTTTTCTCTCTGCCCGTGTCGTTCTTCCCCCAGCGCGAG GTGTTGGGGCACCTGAAAACCAAGCCGGTCAAGCTGGCGAATATTCCCAA GAGCACACCGGCGCGCAAGAGCTGGCACGTCGAGCGCAACCACGTGATGA AAGCTGTGTTCGAGGTGCTCACCGGCGAAGGAGCCCCGCGTTTGGTGGGG CTCGTGAGCAACAGCGGGTCTGGCAAGACCACGGCCGCGTCCGAGATCGT CAGGAGCCCCGACATACGAGAGGTGTTCTCCGACGGTATCGTGTGGCTGA CGGTAAACGCCAGTGCAATAGAGCGCCTTCCGGCCTCGATGACGCGGCTG GCCCGCATGGTGTACGAGGACATCGGGGGCAGCACGGGTGATCCGTCCAA TGCATCGGAGGACGGTACTGCCTACGTTAAGTCAAACATGGAGAGGGGCC ATGGAGGGAAGGGGTTTAGGTGCCTCCTGGTGGCCGACAACGTGTGGGAG AAGTGGTCTCAAAGCTACTGGAGACCAGATTGTGGATTCTCCTGTCGACC CGTGATGGCCTCCTGGTGTCAGGTGTAGATGGGGAGGCTGTAGGTGTGGA CGAGCTTTCCGAGGGAGATGCGGAGTCGTTGCTGAGAAGAACGGCAGATC TACCTCCCGAGGTTCGCTTGCCCGACGGTGCAGTGGATCTGATCGAGCTG TGCGGCCGCGTGGCGATGGATCTCGCGTTTGTTGGGCGATGGAGCACCGT GCGAGGTAGACAAGACAGGACGGCTTGGTCGGATGCGGCTAGCAAGGTCC GGGCAGCGATGGGTGCGGTCGTGGGCGGTTTTGGAGACGATAGACGGCGT TGGGCCATTCTCCAAGCCGGCTTCGAATACCTTGCCCTTGGGTCGGACGA TGAGCGAGTACAGCGGCTTTACCTATCGCTCGCCGTGATACCGGACGGTT CGTGCCTTTACTCTGATGGATGCCGCGGTCTTGCTTTACGATCGTCAGCC TAGTCCTTAAGACGAGGCATCGGGTAGAGGAGTGAGTGTTGGATATCCTC GAGCGCTGGACCATCATCCGGTCGACAGAAGGGATCTACAGTATGCATGA CGCCCATTTGAACTTTGCGAGGAAGCACTTGGTGGACCGTGGGGACGTGC GCCGGCCTGTGTTGGTGAGATGGGCGAAGTACATCTCCTCGCTAGACACT CTCCGGTCCATCGACCAAGACGTTTTGAAGGGTCTTTGGTTGGCCGTAGA GCGTGTGGGTGAGGACGGATGGGATATATGCCGCCCATACGAGGCTGCGC TGGCTGAGATAGACGAGTTGGACCCCTTGCTCCGAGAGTCCATCGAGACG GTAGGATGTTTTCAAGAAGCACAGGGAGATTGGAAGCGAGCAACTACTAC GTGGAGTCGACTTGTGGAGGTCGAGAAGAGGCAGCTTGGGCCGGCCCAAC CGTATGTGCTGAACTCTTACAACAGCCAAGCTGGCTAGCTGGAGTGGCAG AGCGACTGGGAAATGCTGAAGAGGCAGTAGAATGGCGTGCGAAGGAGCGC GAAGAGCTGCTGCCGTTGGCCCTGGCCAAAGCGCAACAAAAATATGACCG CAGTGGGCCTGCAGGGGTTGAGGATGCGGACGGTCTAAATTCTCTCGCTG AAACCATGCTAAGGCTGACACCGGATGATAGAGATGAAGCAGAAAAACTA TTGAGGCTTTCGTTAGGCACCCATGAGGCAAAGCTGGGTCCAGAGGATTT GGAGGTGGCCGACACGCTCTATAGGCTGAGCGCATGCGTTCGAGCAGCAG GACGGCTGGAGGAGGCTGAGCAGTTGTTGGGGCGGTGTCTTGCGATCGAG GAGGCCAAGCTGGGTCGAAAGGATGTACGGGTGGCCTGCATGCGGTACCT GCCGGGTGTATTGGTTCAAGCGGCAGAGCGGCTGGAGGAGGCGGAGGAGT TGTCGAGGCGCTGTCTGGCGATCCAGGAAGCCAAGCTCGGACCGGATGAT GTCCAGGTAGCCTTCACCCTGTGCGTTCGAGAGGCAGGTCGGCTGGAGGA GGCGAAGGCGCTGTTGCGGCGTTGTCTGGCGATCGAGGAGACCAAGGTCG GACCGGAAGATGTCCAGGCAGTCGTCACGCTGTACCAGCTGGGCGTATGT GTTTGAGAGGTTGGCGGGCCGAAGGAGGCGGAAGAGTTGTTGAGGCGTTG TCTGGCGGTCCAGGAGGCCAAGCTCGGACCGGGTGCTGTCCAGGTGCCCC TAACCGTACAACACCTTGGCGAATGC
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Coding sequence (CDS) from alignment at C-linearis_contig10:1186917..1190142+

>mRNA_C-linearis_contig10.483.1 ID=mRNA_C-linearis_contig10.483.1|Name=mRNA_C-linearis_contig10.483.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1794bp|location=Sequence derived from alignment at C-linearis_contig10:1186917..1190142+ (Chordaria linearis ClinC8C monoicous)
ATGCATGACGCCCATTTGAACTTTGCGAGGAAGCACTTGGTGGACCGTGG
GGACGTGCGCCGGCCTGTGTTGGTGAGATGGGCGAAGTACATCTCCTCGC
TAGACACTCTCCGGTCCATCGACCAAGACGTTTTGAAGGGTCTTTGGTTG
GCCGTAGAGCGTGTGGGTGAGGACGGATGGGATATATGCCGCCCATACGA
GGCTGCGCTGGCTGAGATAGACGAGTTGGACCCCTTGCTCCGAGAGTCCA
TCGAGACGGTAGGATGTTTTCAAGAAGCACAGGGAGATTGGAAGCGAGCA
ACTACTACGTGGAGTCGACTTGTGGAGGTCGAGAAGAGGCAGCTTGGGCC
GGCCCAACCGTATATGCATGACGCCCATTTGAACTTTGCGAGGAAGCACT
TGGTGGACCGTGGGGACGTGCGCCGGCCTGTGTTGGTGAGATGGGCGAAG
TACATCTCCTCGCTAGACACTCTCCGGTCCATCGACCAAGACGTTTTGAA
GGGTCTTTGGTTGGCCGTAGAGCGTGTGGGTGAGGACGGATGGGATATAT
GCCGCCCATACGAGGCTGCGCTGGCTGAGATAGACGAGTTGGACCCCTTG
CTCCGAGAGTCCATCGAGACGGTAGGATGTTTTCAAGAAGCACAGGGAGA
TTGGAAGCGAGCAACTACTACGTGGAGTCGACTTGTGGAGGTCGAGAAGA
GGCAGCTTGGGCCGGCCCAACCGTATGATGCGGACGGTCTAAATTCTCTC
GCTGAAACCATGCTAAGGCTGACACCGGATGATAGAGATGAAGCAGAAAA
ACTATTGAGGCTTTCGTTAGGCACCCATGAGGCAAAGCTGGGTCCAGAGG
ATTTGGAGGTGGCCGACACGCTCTATAGGCTGAGCGCATGCGTTCGAGCA
GCAGGACGGCTGGAGGAGGCTGAGCAGTTGTTGGGGCGGTGTCTTGCGAT
CGAGGAGGCCAAGCTGGGTCGAAAGGATGTACGGGTGGCCTGCATGCGGT
ACCTGCCGGGTGTATTGGTTCAAGCGGCAGAGCGGCTGGAGGAGGCGGAG
GAGTTGTCGAGGCGCTGTCTGGCGATCCAGGAAGCCAAGCTCGGACCGGA
TGATGTCCAGGTAGCCTTCACCCTGTGCGTTCGAGAGGCAGGTCGGCTGG
AGGAGGCGAAGGCGCTGTTGCGGCGTTGTCTGGCGATCGAGGAGACCAAG
GTCGGACCGGAAGATGTCCAGGCAGTCGTCACGCTGTACCAGCTGGGCGT
ATGTGTTTGAGATGCGGACGGTCTAAATTCTCTCGCTGAAACCATGCTAA
GGCTGACACCGGATGATAGAGATGAAGCAGAAAAACTATTGAGGCTTTCG
TTAGGCACCCATGAGGCAAAGCTGGGTCCAGAGGATTTGGAGGTGGCCGA
CACGCTCTATAGGCTGAGCGCATGCGTTCGAGCAGCAGGACGGCTGGAGG
AGGCTGAGCAGTTGTTGGGGCGGTGTCTTGCGATCGAGGAGGCCAAGCTG
GGTCGAAAGGATGTACGGGTGGCCTGCATGCGGTACCTGCCGGGTGTATT
GGTTCAAGCGGCAGAGCGGCTGGAGGAGGCGGAGGAGTTGTCGAGGCGCT
GTCTGGCGATCCAGGAAGCCAAGCTCGGACCGGATGATGTCCAGGTAGCC
TTCACCCTGTGCGTTCGAGAGGCAGGTCGGCTGGAGGAGGCGAAGGCGCT
GTTGCGGCGTTGTCTGGCGATCGAGGAGACCAAGGTCGGACCGGAAGATG
TCCAGGCAGTCGTCACGCTGTACCAGCTGGGCGTATGTGTTTGA
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