mRNA_C-linearis_contig10.466.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig10.466.1
Unique NamemRNA_C-linearis_contig10.466.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig10.466.1 vs. uniprot
Match: D7G016_ECTSI (NDK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G016_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 5.410e-96
Identity = 137/143 (95.80%), Postives = 140/143 (97.90%), Query Frame = 3 
Query:  225 MIKPDGVQRTLVGEIIARFEKKGYKLAALKMARPERSHLEAHYADLSGKGFFAGLIDYMASGPVVCMVWTGVNVVLEGRKMLGATKPSESAMGTIRGDFCVEVGRNVCHGSDSTESAEHEIKLWFPEGVCEWDSCTGAWVYEK 653
            MIKPDGVQR LVGEIIARFEKKGYKLAALKMARPERSHLE HYADLSGKGFFAGLIDYMASGPVVCMVWTGVNVVLEGRKMLGATKPSESAMGTIRGDFCVEVGRNVCHGSDST+SAEHEIKLWFPEGVCEWD+CT AW+YEK
Sbjct:    1 MIKPDGVQRNLVGEIIARFEKKGYKLAALKMARPERSHLEEHYADLSGKGFFAGLIDYMASGPVVCMVWTGVNVVLEGRKMLGATKPSESAMGTIRGDFCVEVGRNVCHGSDSTDSAEHEIKLWFPEGVCEWDACTNAWIYEK 143
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BLAST of mRNA_C-linearis_contig10.466.1 vs. uniprot
Match: A0A7S3V4T0_9STRA (Nucleoside diphosphate kinase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4T0_9STRA)

HSP 1 Score: 254 bits (650), Expect = 8.290e-81
Identity = 115/149 (77.18%), Postives = 128/149 (85.91%), Query Frame = 3 
Query:  207 MERTYIMIKPDGVQRTLVGEIIARFEKKGYKLAALKMARPERSHLEAHYADLSGKGFFAGLIDYMASGPVVCMVWTGVNVVLEGRKMLGATKPSESAMGTIRGDFCVEVGRNVCHGSDSTESAEHEIKLWFPEGVCEWDSCTGAWVYEK 653
            MERTYIMIKPDGVQRTLVGEII RFE KGYKL A+K+  P R H+EAHYADL  K FF GLIDYM SGPVV MVW G N VLEGRKMLGAT PSESAMGTIRGDFC+EVGRN+CHGSDS +SA HEI +WFPEGVCE+ +C+G+W+YE+
Sbjct:    1 MERTYIMIKPDGVQRTLVGEIIKRFEAKGYKLVAMKLTAPGREHMEAHYADLKSKKFFPGLIDYMTSGPVVAMVWEGANAVLEGRKMLGATMPSESAMGTIRGDFCIEVGRNICHGSDSVDSANHEIGMWFPEGVCEYTACSGSWIYEE 149
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BLAST of mRNA_C-linearis_contig10.466.1 vs. uniprot
Match: A0A067CC09_SAPPC (Nucleoside diphosphate kinase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CC09_SAPPC)

HSP 1 Score: 249 bits (635), Expect = 1.510e-78
Identity = 115/148 (77.70%), Postives = 128/148 (86.49%), Query Frame = 3 
Query:  207 MERTYIMIKPDGVQRTLVGEIIARFEKKGYKLAALKMARPERSHLEAHYADLSGKGFFAGLIDYMASGPVVCMVWTGVNVVLEGRKMLGATKPSESAMGTIRGDFCVEVGRNVCHGSDSTESAEHEIKLWFPEGVCEWDSCTGAWVYE 650
            MERTYIMIKPDGVQR LVGEII RFE+KG++L A+K+ RP + HL+AHYADL+GKGFF GLI+YM SGPVV MVW G NVV EGRKMLGATKPSESA GTIRGD+ VEVGRN+CHGSD+ ESAEHEI LWFPEGVCEW+    AWVYE
Sbjct:    1 MERTYIMIKPDGVQRNLVGEIIKRFEQKGFQLLAMKLVRPGKEHLQAHYADLAGKGFFNGLIEYMNSGPVVAMVWGGANVVKEGRKMLGATKPSESAPGTIRGDYAVEVGRNICHGSDAVESAEHEIALWFPEGVCEWNPSRNAWVYE 148
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BLAST of mRNA_C-linearis_contig10.466.1 vs. uniprot
Match: K3X7K4_GLOUD (Nucleoside diphosphate kinase n=2 Tax=Oomycota TaxID=4762 RepID=K3X7K4_GLOUD)

HSP 1 Score: 248 bits (632), Expect = 4.560e-78
Identity = 117/147 (79.59%), Postives = 126/147 (85.71%), Query Frame = 3 
Query:  210 ERTYIMIKPDGVQRTLVGEIIARFEKKGYKLAALKMARPERSHLEAHYADLSGKGFFAGLIDYMASGPVVCMVWTGVNVVLEGRKMLGATKPSESAMGTIRGDFCVEVGRNVCHGSDSTESAEHEIKLWFPEGVCEWDSCTGAWVYE 650
            E+TYIM+KPDGVQR LVGEII RFE KGYKL ALK+ARP R HLE HYADL+GK FF GLI+YM+SGPV  MVW G NVVLEGRKMLGATKPSESA+GTIRGDFCVEVGRNVCHGSDS ESA+ EI LWFPEGV EW+S    WVYE
Sbjct:    4 EQTYIMVKPDGVQRHLVGEIIKRFETKGYKLVALKLARPSREHLEQHYADLAGKPFFPGLINYMSSGPVTAMVWEGTNVVLEGRKMLGATKPSESALGTIRGDFCVEVGRNVCHGSDSVESAKKEIALWFPEGVIEWNSSDDDWVYE 150
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BLAST of mRNA_C-linearis_contig10.466.1 vs. uniprot
Match: A0A836CJ48_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ48_9STRA)

HSP 1 Score: 247 bits (630), Expect = 9.440e-78
Identity = 114/150 (76.00%), Postives = 130/150 (86.67%), Query Frame = 3 
Query:  201 STMERTYIMIKPDGVQRTLVGEIIARFEKKGYKLAALKMARPERSHLEAHYADLSGKGFFAGLIDYMASGPVVCMVWTGVNVVLEGRKMLGATKPSESAMGTIRGDFCVEVGRNVCHGSDSTESAEHEIKLWFPEGVCEWDSCTGAWVYE 650
            S  E+TYIM+KPDGV R++VGEII RFE KGYKL ALKMA P R HLE HY DL+G+ FFAGLI+YMASGPVVCMVW G NVVLEGRKMLGATKPSESA+GTIRGDFC++VGRNVCHGSD+ ESA+ EI LWFPEG+CE++  T +WVYE
Sbjct:    2 SVKEQTYIMVKPDGVMRSIVGEIIKRFETKGYKLVALKMAVPSREHLEKHYEDLNGRPFFAGLINYMASGPVVCMVWEGRNVVLEGRKMLGATKPSESALGTIRGDFCIDVGRNVCHGSDAVESAQKEIALWFPEGLCEYEKPTVSWVYE 151
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BLAST of mRNA_C-linearis_contig10.466.1 vs. uniprot
Match: A0A485LBY3_9STRA (Nucleoside diphosphate kinase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LBY3_9STRA)

HSP 1 Score: 244 bits (623), Expect = 9.660e-77
Identity = 112/148 (75.68%), Postives = 127/148 (85.81%), Query Frame = 3 
Query:  207 MERTYIMIKPDGVQRTLVGEIIARFEKKGYKLAALKMARPERSHLEAHYADLSGKGFFAGLIDYMASGPVVCMVWTGVNVVLEGRKMLGATKPSESAMGTIRGDFCVEVGRNVCHGSDSTESAEHEIKLWFPEGVCEWDSCTGAWVYE 650
            MERTYIMIKPDGVQR LVGEII RFE+KG++L ALK+  P ++HLEAHYADL+GKGFFAGLI+YM SGPV+ MVW G NVV EGRKMLGATKPS+SA GTIRGD+ VEVGRN+CHGSDS ESA HEI LWFPEG+ EW++    WVYE
Sbjct:    1 MERTYIMIKPDGVQRNLVGEIIKRFEQKGFQLVALKLTAPGKAHLEAHYADLAGKGFFAGLIEYMNSGPVIAMVWQGFNVVKEGRKMLGATKPSDSAPGTIRGDYAVEVGRNICHGSDSVESANHEIALWFPEGITEWNASRNVWVYE 148
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BLAST of mRNA_C-linearis_contig10.466.1 vs. uniprot
Match: A0A7S2ETK7_TRICV (Nucleoside diphosphate kinase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ETK7_TRICV)

HSP 1 Score: 243 bits (621), Expect = 1.930e-76
Identity = 113/149 (75.84%), Postives = 121/149 (81.21%), Query Frame = 3 
Query:  207 MERTYIMIKPDGVQRTLVGEIIARFEKKGYKLAALKMARPERSHLEAHYADLSGKGFFAGLIDYMASGPVVCMVWTGVNVVLEGRKMLGATKPSESAMGTIRGDFCVEVGRNVCHGSDSTESAEHEIKLWFPEGVCEWDSCTGAWVYEK 653
            MERTYIMIKPDGVQR L+GEII RFE KGYKL A+K+  P ++H+E HY DLS K FF GLI YM SGPVV MVW G NVVLEGRKMLGAT P ESAMGTIRGDFC+EVGRNVCHGSDS ESA  EI  WFPEGV EW+SC   WVYEK
Sbjct:    1 MERTYIMIKPDGVQRGLIGEIIRRFESKGYKLVAMKLCSPSKAHMEEHYVDLSSKPFFPGLISYMLSGPVVAMVWEGANVVLEGRKMLGATMPKESAMGTIRGDFCIEVGRNVCHGSDSVESANKEIAHWFPEGVSEWESCQHTWVYEK 149
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BLAST of mRNA_C-linearis_contig10.466.1 vs. uniprot
Match: H3G8V0_PHYRM (Nucleoside diphosphate kinase n=18 Tax=Peronosporaceae TaxID=4777 RepID=H3G8V0_PHYRM)

HSP 1 Score: 243 bits (619), Expect = 4.130e-76
Identity = 114/148 (77.03%), Postives = 125/148 (84.46%), Query Frame = 3 
Query:  210 ERTYIMIKPDGVQRTLVGEIIARFEKKGYKLAALKMARPERSHLEAHYADLSGKGFFAGLIDYMASGPVVCMVWTGVNVVLEGRKMLGATKPSESAMGTIRGDFCVEVGRNVCHGSDSTESAEHEIKLWFPEGVCEWDSCTGAWVYEK 653
            E+TYIMIKPDGVQR LVGEII RFE KGYKL ALK+ARP   HLEAHYADL+G+ FF  LI YM+SGPV CMVW G NVVLEGRKMLGATKP++SA+GTIRGDFCV+VGRNVCHGSDS ESA+ EI LWFPEGV EW +    WVYEK
Sbjct:    4 EQTYIMIKPDGVQRHLVGEIIKRFETKGYKLVALKLARPAVEHLEAHYADLAGRPFFPALIKYMSSGPVTCMVWEGTNVVLEGRKMLGATKPTDSALGTIRGDFCVDVGRNVCHGSDSVESAQKEIALWFPEGVIEWGAYDDEWVYEK 151
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BLAST of mRNA_C-linearis_contig10.466.1 vs. uniprot
Match: A0A6U2HUH9_9STRA (Nucleoside diphosphate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2HUH9_9STRA)

HSP 1 Score: 242 bits (617), Expect = 7.470e-76
Identity = 114/148 (77.03%), Postives = 121/148 (81.76%), Query Frame = 3 
Query:  207 MERTYIMIKPDGVQRTLVGEIIARFEKKGYKLAALKMARPERSHLEAHYADLSGKGFFAGLIDYMASGPVVCMVWTGVNVVLEGRKMLGATKPSESAMGTIRGDFCVEVGRNVCHGSDSTESAEHEIKLWFPEGVCEWDSCTGAWVYE 650
            MERTYIMIKPDGVQR LVGEII RFE KGYKL A+KM  P + H+E HY DLS KGFF GLI YM SGPVV MVW G NVVLEGRKMLGAT P ESAMGTIRGDFC+EVGRNVCHGSDS +SA+ EI  WFPEGV EW SC  +WVYE
Sbjct:    1 MERTYIMIKPDGVQRGLVGEIIRRFEAKGYKLVAMKMTSPGKEHMEKHYEDLSNKGFFPGLIAYMTSGPVVAMVWEGANVVLEGRKMLGATMPRESAMGTIRGDFCIEVGRNVCHGSDSVDSAKKEIDHWFPEGVTEWTSCQHSWVYE 148
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BLAST of mRNA_C-linearis_contig10.466.1 vs. uniprot
Match: A0A0P1AQZ5_PLAHL (Nucleoside diphosphate kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQZ5_PLAHL)

HSP 1 Score: 241 bits (616), Expect = 1.130e-75
Identity = 114/147 (77.55%), Postives = 123/147 (83.67%), Query Frame = 3 
Query:  210 ERTYIMIKPDGVQRTLVGEIIARFEKKGYKLAALKMARPERSHLEAHYADLSGKGFFAGLIDYMASGPVVCMVWTGVNVVLEGRKMLGATKPSESAMGTIRGDFCVEVGRNVCHGSDSTESAEHEIKLWFPEGVCEWDSCTGAWVYE 650
            ERTYIM+KPDGVQR LVGEII RFE KGYKL ALK+ARP   HLEAHYADL+G+ FF  LI YM+SGPV CMVW G NVVLEGRKMLGATKPSESA+GTIRGDFCV+VGRNVCHGSDS +SA  EI LWFPEG+ EW S    WVYE
Sbjct:    4 ERTYIMVKPDGVQRHLVGEIIKRFETKGYKLVALKLARPSIDHLEAHYADLAGRPFFPSLIAYMSSGPVACMVWEGNNVVLEGRKMLGATKPSESALGTIRGDFCVDVGRNVCHGSDSVDSANKEISLWFPEGLVEWSSNDDEWVYE 150
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G016_ECTSI5.410e-9695.80NDK domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S3V4T0_9STRA8.290e-8177.18Nucleoside diphosphate kinase n=1 Tax=Chaetoceros ... [more]
A0A067CC09_SAPPC1.510e-7877.70Nucleoside diphosphate kinase n=3 Tax=Saprolegniac... [more]
K3X7K4_GLOUD4.560e-7879.59Nucleoside diphosphate kinase n=2 Tax=Oomycota Tax... [more]
A0A836CJ48_9STRA9.440e-7876.00Nucleoside diphosphate kinase n=1 Tax=Tribonema mi... [more]
A0A485LBY3_9STRA9.660e-7775.68Nucleoside diphosphate kinase n=2 Tax=Aphanomyces ... [more]
A0A7S2ETK7_TRICV1.930e-7675.84Nucleoside diphosphate kinase n=1 Tax=Trieres chin... [more]
H3G8V0_PHYRM4.130e-7677.03Nucleoside diphosphate kinase n=18 Tax=Peronospora... [more]
A0A6U2HUH9_9STRA7.470e-7677.03Nucleoside diphosphate kinase n=1 Tax=Pseudictyota... [more]
A0A0P1AQZ5_PLAHL1.130e-7577.55Nucleoside diphosphate kinase n=1 Tax=Plasmopara h... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:945649..949979 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score296.2
Seed ortholog evalue8.6e-78
Seed eggNOG ortholog2880.D7G016
Preferred nameNME3
KEGG rclassRC00002
KEGG koko:K00940
KEGG ReactionR00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895
KEGG Pathwayko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016
KEGG ModuleM00049,M00050,M00052,M00053
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000278,GO:0000287,GO:0000976,GO:0000977,GO:0001012,GO:0001067,GO:0001101,GO:0001667,GO:0001678,GO:0001726,GO:0001775,GO:0001882,GO:0001883,GO:0001932,GO:0001934,GO:0002009,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002682,GO:0002683,GO:0002761,GO:0002762,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003700,GO:0003824,GO:0004518,GO:0004536,GO:0004550,GO:0004672,GO:0004674,GO:0005488,GO:0005504,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005758,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005874,GO:0005880,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006183,GO:0006213,GO:0006220,GO:0006221,GO:0006228,GO:0006241,GO:0006259,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006915,GO:0006928,GO:0006950,GO:0006955,GO:0006979,GO:0007017,GO:0007049,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007186,GO:0007187,GO:0007188,GO:0007189,GO:0007229,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007424,GO:0007427,GO:0007589,GO:0007595,GO:0008017,GO:0008092,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008284,GO:0008285,GO:0008289,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009132,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009147,GO:0009148,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009888,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010631,GO:0010646,GO:0010647,GO:0010720,GO:0010941,GO:0010975,GO:0010976,GO:0012501,GO:0012505,GO:0014070,GO:0014074,GO:0014075,GO:0015630,GO:0015631,GO:0015949,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016301,GO:0016310,GO:0016333,GO:0016334,GO:0016477,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0016787,GO:0016788,GO:0017076,GO:0018105,GO:0018130,GO:0018193,GO:0018209,GO:0019001,GO:0019205,GO:0019215,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019725,GO:0019867,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0019933,GO:0019935,GO:0021537,GO:0021543,GO:0021761,GO:0021766,GO:0022008,GO:0022607,GO:0022610,GO:0023051,GO:0023052,GO:0023056,GO:0030027,GO:0030100,GO:0030141,GO:0030154,GO:0030334,GO:0030554,GO:0030856,GO:0030858,GO:0030879,GO:0030900,GO:0031090,GO:0031252,GO:0031253,GO:0031256,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031399,GO:0031401,GO:0031406,GO:0031410,GO:0031966,GO:0031967,GO:0031968,GO:0031970,GO:0031974,GO:0031975,GO:0031982,GO:0031983,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0032587,GO:0032879,GO:0032940,GO:0033293,GO:0033500,GO:0033554,GO:0033574,GO:0033993,GO:0034284,GO:0034330,GO:0034332,GO:0034404,GO:0034599,GO:0034641,GO:0034654,GO:0034774,GO:0035152,GO:0035556,GO:0035639,GO:0035690,GO:0036094,GO:0036211,GO:0036230,GO:0040007,GO:0040011,GO:0040012,GO:0040026,GO:0040028,GO:0042119,GO:0042127,GO:0042221,GO:0042278,GO:0042325,GO:0042327,GO:0042451,GO:0042455,GO:0042493,GO:0042592,GO:0042593,GO:0042802,GO:0042981,GO:0042995,GO:0043015,GO:0043021,GO:0043024,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043388,GO:0043408,GO:0043410,GO:0043412,GO:0043434,GO:0043565,GO:0043933,GO:0044085,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045055,GO:0045216,GO:0045321,GO:0045595,GO:0045596,GO:0045597,GO:0045604,GO:0045606,GO:0045616,GO:0045618,GO:0045637,GO:0045638,GO:0045664,GO:0045666,GO:0045682,GO:0045684,GO:0045893,GO:0045935,GO:0045937,GO:0045944,GO:0046036,GO:0046039,GO:0046051,GO:0046128,GO:0046129,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046683,GO:0046777,GO:0046872,GO:0046903,GO:0046939,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048699,GO:0048729,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050678,GO:0050679,GO:0050764,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050878,GO:0050896,GO:0051049,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051211,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051259,GO:0051270,GO:0051591,GO:0051674,GO:0051716,GO:0051960,GO:0051962,GO:0055082,GO:0055086,GO:0060099,GO:0060205,GO:0060255,GO:0060284,GO:0060322,GO:0060416,GO:0060429,GO:0060541,GO:0060548,GO:0060627,GO:0061062,GO:0061063,GO:0061508,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070542,GO:0070887,GO:0071229,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071396,GO:0071398,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0072527,GO:0072528,GO:0080090,GO:0090130,GO:0090132,GO:0090304,GO:0090305,GO:0090407,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098590,GO:0098805,GO:0099080,GO:0099081,GO:0099503,GO:0099512,GO:0099513,GO:0101002,GO:0120025,GO:0120035,GO:0120038,GO:0140096,GO:0140097,GO:0140110,GO:1901068,GO:1901070,GO:1901074,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901654,GO:1901657,GO:1901659,GO:1901698,GO:1901700,GO:1901701,GO:1902105,GO:1902106,GO:1902531,GO:1902533,GO:1902680,GO:1903506,GO:1903508,GO:1903706,GO:1903707,GO:1904813,GO:1905153,GO:1990837,GO:2000026,GO:2000112,GO:2000145,GO:2000425,GO:2001141
EggNOG free text desc.Nucleoside diphosphate kinase
EggNOG OGsCOG0105@1,KOG0888@2759
Ec32 ortholog descriptionNucleoside diphosphate kinase
Ec32 orthologEc-22_003280.1
EC2.7.4.6
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Exons6
Model size1297
Cds size450
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.466.1prot_C-linearis_contig10.466.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig10 946224..949338 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927330.7838454-UTR-C-linearis_contig10:945648..9458501622927330.7838454-UTR-C-linearis_contig10:945648..945850Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 945649..945850 +
1690879630.2164743-UTR-C-linearis_contig10:945648..9458501690879630.2164743-UTR-C-linearis_contig10:945648..945850Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 945649..945850 +
1622927330.7991283-UTR-C-linearis_contig10:946219..9462231622927330.7991283-UTR-C-linearis_contig10:946219..946223Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 946220..946223 +
1690879630.2367654-UTR-C-linearis_contig10:946219..9462231690879630.2367654-UTR-C-linearis_contig10:946219..946223Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 946220..946223 +
1622927330.8685982-UTR-C-linearis_contig10:949338..9499791622927330.8685982-UTR-C-linearis_contig10:949338..949979Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 949339..949979 +
1690879630.2941277-UTR-C-linearis_contig10:949338..9499791690879630.2941277-UTR-C-linearis_contig10:949338..949979Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 949339..949979 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927330.8134086-CDS-C-linearis_contig10:946223..9463311622927330.8134086-CDS-C-linearis_contig10:946223..946331Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 946224..946331 +
1690879630.2463484-CDS-C-linearis_contig10:946223..9463311690879630.2463484-CDS-C-linearis_contig10:946223..946331Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 946224..946331 +
1622927330.8222961-CDS-C-linearis_contig10:947095..9471821622927330.8222961-CDS-C-linearis_contig10:947095..947182Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 947096..947182 +
1690879630.261936-CDS-C-linearis_contig10:947095..9471821690879630.261936-CDS-C-linearis_contig10:947095..947182Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 947096..947182 +
1622927330.8321607-CDS-C-linearis_contig10:947874..9480021622927330.8321607-CDS-C-linearis_contig10:947874..948002Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 947875..948002 +
1690879630.2699628-CDS-C-linearis_contig10:947874..9480021690879630.2699628-CDS-C-linearis_contig10:947874..948002Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 947875..948002 +
1622927330.8443253-CDS-C-linearis_contig10:948513..9485881622927330.8443253-CDS-C-linearis_contig10:948513..948588Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 948514..948588 +
1690879630.2780077-CDS-C-linearis_contig10:948513..9485881690879630.2780077-CDS-C-linearis_contig10:948513..948588Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 948514..948588 +
1622927330.8572574-CDS-C-linearis_contig10:949286..9493381622927330.8572574-CDS-C-linearis_contig10:949286..949338Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 949287..949338 +
1690879630.2856028-CDS-C-linearis_contig10:949286..9493381690879630.2856028-CDS-C-linearis_contig10:949286..949338Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 949287..949338 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.466.1

>prot_C-linearis_contig10.466.1 ID=prot_C-linearis_contig10.466.1|Name=mRNA_C-linearis_contig10.466.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=150bp
MERTYIMIKPDGVQRTLVGEIIARFEKKGYKLAALKMARPERSHLEAHYA
DLSGKGFFAGLIDYMASGPVVCMVWTGVNVVLEGRKMLGATKPSESAMGT
IRGDFCVEVGRNVCHGSDSTESAEHEIKLWFPEGVCEWDSCTGAWVYEK*
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mRNA from alignment at C-linearis_contig10:945649..949979+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.466.1 ID=mRNA_C-linearis_contig10.466.1|Name=mRNA_C-linearis_contig10.466.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4331bp|location=Sequence derived from alignment at C-linearis_contig10:945649..949979+ (Chordaria linearis ClinC8C monoicous)
CTATCTTGCCCCCTCCCCCTTCCTTCCTCCACACCCTTAAGGTGAGATGG
TGTTCAACCTTGCCAGGTAGAGTTTGTCGGTTTCGCCGGCTGTCGAGAGA
GCAGCTCAAGTGCATGGTTTTTGCGCCTCTACCCGCTGATCCAAGAACAT
TCGGGACTGCTTGTGTGGCAATCTGTGGACCGTATTGACGAGAGAGGTGG
AGGTAGGCCCCGGGAATCTCTCCTCTGCCTTTCCGTTGTCAACTGGCTTC
TTGCGTGCCAGCAGCTAAGATAGAGCTTTTTGTTCATGCGCAGGCAGCTA
ATCGAACAGCTTACGGTCCTCCCTTGTTGCTCCCGAAAGGGGTGTAAGGT
GACAAAACAGGAGGAGCAGTTCGTCCGAGAGGAGAGAGAGAGCGAGTGAT
AGCGGCGCGCTCGATAGGATATCCAGCAGACGTGGTGCAGCAGTAGCCCG
ACCGATACATGGTGGAAATGTTTTCGCCCAGCTTAATGAGCACGTTCTCT
CATGTTTAACGCCTCTCTTTCTCTTTCTGTTGCCCCGAACCTCGCGTGTC
CTTCTCCCCCCGTGTGTCCAGCACCATGGAGCGCACCTACATCATGATCA
AGCCGGACGGCGTCCAGCGCACCCTCGTGGGCGAGATCATCGCCCGCTTC
GAGAAGAAGGGCTACAAGCTCGCCGCCCTCAAGGTATGCGCGCCCTCTAT
ATTTTACTCAAGACACACCCCTTACAAGTGAGTGCAGTCCGCCGATCCGG
GCAGTCTACACGGCAATGGCAACAGCAGAAAAAAGTCTTGCAAATTGGGA
GGAAACGGATTCGTTCTTCATCGACCCGAACTGATGTACTGCTGTAGAGC
AGTGCGGCGGTGAGGTCGGCCCAGTGCCTGGTTGAGGGGACAAGAGCAAG
CCCGTGCCTCTGCCTTTTCGAACCGTGCAGAGTTTTGCTATCACCAGTTC
ATGCGTAACGGACGAGTAGTGTAGGCGTTGGAGGCGACGAGGCAATAGAT
AAACACATACGGTACATACTCCGGAGTACATCCGTAGCTCCTTTCGAAGG
GAGAGGCGAAAGCGTCGGAACAAAATTTCAAAAATTCGGAACACGCATCC
TGCAGAAATTTCCTGGCTACACAGTAGTACCTGTAGCCTAGCCGGCGGCT
TGACGGGACACCACAGCTTTCGGTTGCCGAAACCGAGGACACAGCACACC
AGCACGGACTGGGAGTGCCTGCCTTCTGTCGGTAGCGTTGCTGCTCCAGT
TGTCGATTGCCGCGCAAAGGTCAGGCCTCTTCTTCCGCCAAAAATAAAGC
ACACCGCCATCCGCGACGTCCGAACCGACACACGGAACAATGTGCGGGAT
ATGTCCGTGATGATGTGTGACTTTACACCTTTTCTGGCGGCCGCATATGT
GTGTGTGTGTGCGTGTGCGTGTGTGAACTTGTCTCTTGGTAATTTAGATG
GCGCGCCCGGAGCGATCCCACCTTGAGGCCCACTACGCCGACCTCAGCGG
CAAGGGCTTCTTCGCCGGCCTCATCGACTACATGGTGAGCCAAACTAAAA
CTGGCAGATTCCATATTCCACTACATGTAGCTAAGCTACGTATCACGGCG
TCCCATTTTTTCAGCATTCGTGCCGCCCGTATCTACATATAGCGCTGTGT
CTGAAGCTCGGGTAAATGTGGATGTATTGGGTGCGGTATGCGCCGGTGCA
GGCGTTTTTCTTGGAGCGCCCATACGGAGAAAGTAAGTTTATATTGGAAA
TAGAGAGTGGGGCTCCGTAAACCTAACCCTAACACCCGACCCCCCCCCCC
CATTCCGCCAATTCTATACTTTATCCTATGTGTTTGCTGACTCTGTATAA
CCTGCGTCGACTACTGTTTTTTCTTGGAGCTGCACATGCACCCTTCACCC
TTTGTACTTTCCCTTGTTGGGTTTCTGGTCTGCATTCATTCGCCTCACTG
CTGTAGCCATAAACATTAGCATCGACGTCCACCTCTCCCCCCCTTTGTAC
AGCAGAATATGACGACGCGTGCAATACGCTGCTGTGATGCGTACGTGCGG
CGTGTGGACTTTCGTAAGAGTGGCCGTGCTACCGCGCACCCTGACTCCGA
CTAGCTGCTACATTGCGCCCCCAAGTCCAACGCGTTCACTGCCCCGTGAC
TGATATCTTGTTCTTTTGGCACCCCCCTCGCCTCATCTACTCGTGGTGGT
GCTGATGCTGACGCACTCGCCCCCAGGCGTCAGGCCCCGTGGTGTGCATG
GTGTGGACGGGAGTGAACGTTGTGCTCGAGGGGCGCAAGATGCTGGGGGC
CACCAAGCCGTCCGAGTCCGCCATGGGCACCATCCGCGGCGACTTCTGCG
TAGAGTGAGTTCAAAGCCATAAGACCGGCCTTGTCAGCGTCCTGTGTAGC
TGAGCCCGTAACGGCAGCATGTTGGTCGTCCGCGTCAACATGGCTTGCGC
ATTAAGCTGCAGCCAATCCGTGAGGCCAAACTCTCGGGCCGGGCCCTTCC
TCCTTCGCAGGGACGGTGAAACCAGCCTTGAAAATATAAAACATCCACCT
TGGAAAGACCTATGCCTCCCTTCATTAGCTCGGCACATCCCCGCCTACAC
CGAAAGAAACGAAACTGAGAATTACCGGTATACGCGATACTTCGTATGCA
AGACCAACGAGGGATGCTCTCAACGCAACTGCCATCGACGTACTGACACC
GACTAGCATTTCTCGCTGCTCTGTTCTCGTCACGTCTCCGCCGTCGGCCG
GCCTGCATGGCACTTGATGCTCCTACGCCTTGCCGCCGTCATCACCACCA
ACGAACGGATCGGGATTGGATGTGATGGAATACAAAATGGAAATGGAAAC
GGAATCTTTTTCCAGGGTCGGACGCAACGTCTGCCACGGATCCGACTCCA
CCGAGTCGGCGGAGCACGAGATCAAGCTCTGGTTCCCCGAGTGAGTCCAG
TCAACCAAACCTCGAGATAATTAGAATTATCACCCAGTAGATCCAGTACA
AAAATAACTCGCTACATATCGCTTTATCCCCTTAGATTCAAGCACGAGGT
GTCGGGACACACGCCCTTGACAACAAAGCACGAAAATTGTACCCTTTTCC
GCTCGAGGACGTCCTTGAGTGAACTCAATCTGTTGAATTTCGTCCCACGA
ATTTCGTTCCACGGGCTTTTATGGGTGTCATCTTGAGCGTGGCTGATCCC
GAGCGTGCCACCCGTTCGTTCACTTTTTAGATGATGGTATTCGGATGCAG
CATGTTCCGTGGTTTGCGTCGAAGCAGAGTTCCTCTGCGTCCGATGCTGA
GTCCGTCCGTTGCAGTCCTGGTGCGACCGGCCGCTCGGACTTAGCTGGGT
CGACTGGTAGGCGGAGAGCTTCACTGAGTGGCCGCATCCCGTCTTGACGT
GTGTTGGCAAGCGGTTGAGTATTGGTGTCCGCGCGCTGCTGACGTTTCCT
GTCCACACGTACAGTACTGAATTGCTTCCAGTATTGTTGTTGGTGGTGGT
GTTGCCTTCACATTAAAAACCATCCCGTCTCTCTCCACCCAGCGTACCCC
CCTTTGTCCGTACTAATCCAACGTGCAACCCCTAAGCTCCCCCTCTCCCA
CCCACGGACCCCCCCCCATTTTCTTGCTCACTTGCCAGGGGTGTGTGCGA
GTGGGACTCGTGCACCGGCGCCTGGGTGTACGAGAAGTAACAAGTCTTGA
GTAAGCCTAGGGGTGGGTTGTTGTCGGATCTACGTCCGCGCCACGGCAGC
TTAACGCAAGGATGCGTGGAGAGGATGTGATGTGATGCGCCTTGGGGCAA
GCTCGGCGTGACGACAAAATACAGCCGTCTCAGATGTTGCTGTGTATTGG
GGCGGGGTCCCGTCGTTGTCGTTTGCGGGGGGGTATGGTAGAGATTGGCG
CACTGCACACGAGTCAAGCACCTTGGAGGTATTGATGTGCGATTTGGGGA
CATGCCCGTGTTCATGCCCATACAAGTTTCTCATGTCTTTCTCAAGAGCT
GAAGAGCTAGAGAGGGGAGTCCTTGAAGATGGGTTTGCCAGATCGACGAA
CGACCCACGGGTGCATGCAAGCAGTATGCCTCTACAATATTCAATATGAT
CTTGTTTTGCGGAAAGAGCTTCCGCTGTCCGCTGTTATTGGTGGCGCAGA
CTCTTTGTCCGGCGGGTGCTGGCTGGTGCTTGGTGCAGGCAGGCAGCGGT
TTCAACTTATTTCCGCACGAGTGCTGTGGTGTCGCGGCGCGCGTGGCTGG
GTGTGTACCCATCGCTCGGCTCGCCCCGCTTGGAAGAGATAGATCGCAAC
TCTCACATCTCCCGCAACCAATCAGCACTCC
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Coding sequence (CDS) from alignment at C-linearis_contig10:945649..949979+

>mRNA_C-linearis_contig10.466.1 ID=mRNA_C-linearis_contig10.466.1|Name=mRNA_C-linearis_contig10.466.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=900bp|location=Sequence derived from alignment at C-linearis_contig10:945649..949979+ (Chordaria linearis ClinC8C monoicous)
ATGGAGCGCACCTACATCATGATCAAGCCGGACGGCGTCCAGCGCACCCT
CGTGGGCGAGATCATCGCCCGCTTCGAGAAGAAGGGCTACAAGCTCGCCG
CCCTCAAGATGGAGCGCACCTACATCATGATCAAGCCGGACGGCGTCCAG
CGCACCCTCGTGGGCGAGATCATCGCCCGCTTCGAGAAGAAGGGCTACAA
GCTCGCCGCCCTCAAGATGGCGCGCCCGGAGCGATCCCACCTTGAGGCCC
ACTACGCCGACCTCAGCGGCAAGGGCTTCTTCGCCGGCCTCATCGACTAC
ATGATGGCGCGCCCGGAGCGATCCCACCTTGAGGCCCACTACGCCGACCT
CAGCGGCAAGGGCTTCTTCGCCGGCCTCATCGACTACATGGCGTCAGGCC
CCGTGGTGTGCATGGTGTGGACGGGAGTGAACGTTGTGCTCGAGGGGCGC
AAGATGCTGGGGGCCACCAAGCCGTCCGAGTCCGCCATGGGCACCATCCG
CGGCGACTTCTGCGTAGAGCGTCAGGCCCCGTGGTGTGCATGGTGTGGAC
GGGAGTGAACGTTGTGCTCGAGGGGCGCAAGATGCTGGGGGCCACCAAGC
CGTCCGAGTCCGCCATGGGCACCATCCGCGGCGACTTCTGCGTAGAGGTC
GGACGCAACGTCTGCCACGGATCCGACTCCACCGAGTCGGCGGAGCACGA
GATCAAGCTCTGGTTCCCCGAGGTCGGACGCAACGTCTGCCACGGATCCG
ACTCCACCGAGTCGGCGGAGCACGAGATCAAGCTCTGGTTCCCCGAGGGT
GTGTGCGAGTGGGACTCGTGCACCGGCGCCTGGGTGTACGAGAAGTAAGG
GTGTGTGCGAGTGGGACTCGTGCACCGGCGCCTGGGTGTACGAGAAGTAA
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