prot_C-linearis_contig10.459.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig10.459.1
Unique Name	prot_C-linearis_contig10.459.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	585

Homology

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BLAST of mRNA_C-linearis_contig10.459.1 vs. uniprot
Match: A0A6H5JZF4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF4_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 6.640e-94
Identity = 168/365 (46.03%), Postives = 214/365 (58.63%), Query Frame = 0

Query:  117 FVPNGDYGEYANGPLSDTAAALLLRAFAAIAPKRRPFRVGPTTNALEINYFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTPRA-GGRASEPGVTYHLDLCGAVTASLCGCMYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTEWTSDPFRMFCANAGIRMEFTAPNTPQQNAPVENAIWRLMKGGTVCRRSAVLEFGIDYSGIPNMDSRGDRLWLESVRFTAACFNRSGTKANPGNMSPYEVFTGTKPDAIIVPFLQPLIMRKQRVIKLDDQGEPGYYLGQSHQHGRSTVRVLKVSTGRPCHSRDIVFISGAAASAG--KGEKLAPEFPP 478
            F+P  D    A    S    A      AA+ P   PF +G T  +++IN+FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG RA  PR  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G I+   VD GTEWT   FR FC +  I +EFT P   Q N  VE+AIWR++K G   RRSA   F +D++ IP +D RGD LW+ES ++     N+S TKANPG  SP+E+FTG +    ++PF QP  MR+ R  KLDDQ    YYL     H   TV+VLK STGR  ++ ++ +++ A A  G   G   AP  PP
Sbjct:   31 FIPESDAANVAGVLDSIDGGADFDLGAAALGPGASPFALGSTEKSVDINHFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVKRYDLGRIECFHVDNGTEWTRGDFRRFCDDNCIGVEFTTPGVLQYNGVVESAIWRIVKAGMTARRSAGRVFNVDFASIPGLDERGDLLWMESAKWATDALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPP 395

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BLAST of mRNA_C-linearis_contig10.459.1 vs. uniprot
Match: A0A6H5JL48_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL48_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 1.740e-93
Identity = 187/419 (44.63%), Postives = 236/419 (56.32%), Query Frame = 0

Query:   65 ASVVPSTGVFPPTNTGVVTFLDGSVMQIPYTLEGL--RLGSDVLNIFLDEGDMEFVPNGDYGEYANGPLSDTAAALLLRAFAAIAPKRRPFRVGPTTNALEINYFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTPRA-GGRASEPGVTYHLDLCGAVTASLCGCMYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTEWTSDPFRMFCANAGIRMEFTAPNTPQQNAPVENAIWRLMKGGTVCRRSAVLEFGIDYSGIPNMDSRGDRLWLESVRFTAACFNRSGTKANPGNMSPYEVFTGTKPDAIIVPFLQPLIMRKQRVIKLDDQGEPGYYLGQSHQHGRSTVRVLKVSTGRPCHSRDIVFISGAAASAG--KGEKLAPEFPP 478
            AS     G FP  + G     D SV+     ++G       D   +F+ E D   V  G       G   D  AA       A+ P   PF +G T  +++IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG RA  PR  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G I+  RVD GTEWT   FR FC + GI +EFT P  PQ N  VE+AIWR+MK G   RRSA   F +D++ IP +D RGDRLW+ES ++ A   N+S TKANPG  SP+E+FTG +    ++PF QP  MR+ R  KLDDQ    YYL     H   TV+VLK STGR  ++ ++ +++ A A  G   G   AP  PP
Sbjct:  556 ASGFECVGTFPGMDLG-----DTSVLTDEQLMDGYDDTPHQDFFPVFIPESDAANVA-GVLDSIDGGSDFDLGAA-------ALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFHVDFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPP 961

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BLAST of mRNA_C-linearis_contig10.459.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE)

HSP 1 Score: 322 bits (824), Expect = 1.970e-93
Identity = 174/365 (47.67%), Postives = 219/365 (60.00%), Query Frame = 0

Query:  117 FVPNGDYGEYANGPLSDTAAALLLRAFAAIAPKRRPFRVGPTTNALEINYFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTPRA-GGRASEPGVTYHLDLCGAVTASLCGCMYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTEWTSDPFRMFCANAGIRMEFTAPNTPQQNAPVENAIWRLMKGGTVCRRSAVLEFGIDYSGIPNMDSRGDRLWLESVRFTAACFNRSGTKANPGNMSPYEVFTGTKPDAIIVPFLQPLIMRKQRVIKLDDQGEPGYYLGQSHQHGRSTVRVLKVSTGRPCHSRDIVFISGAAASAG--KGEKLAPEFPP 478
            F+P  D    A    S    A      AA+ P   PF +G T  +++IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG RA  PR  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G I+  RVD GTEWT   FR FC + GI +EFT P  PQ N  VE+AIWR+MK G   RRSA   F +D++ IP++D RGDRLW+ES ++ A   N+S TKANPG  SP+E+FTG +    ++PF QP  MR+ R  KLDDQ    YYL     H   TV+VLK STGR  ++ ++ +++ A A  G   G   AP  PP
Sbjct:  237 FIPESDAANAAGVLDSIDGGADFDLGAAALGPGASPFALGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFDVDFASIPSLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPP 601

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BLAST of mRNA_C-linearis_contig10.459.1 vs. uniprot
Match: A0A6H5KAL3_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL3_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 3.690e-93
Identity = 162/342 (47.37%), Postives = 203/342 (59.36%), Query Frame = 0

Query:  104 DVLNIFLDEGDMEFVPNGDYGEYANGPLSDTAAALLLRAFAAIAPKRRPFRVGPTTNALEINYFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTPRA-GGRASEPGVTYHLDLCGAVTASLCGCMYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTEWTSDPFRMFCANAGIRMEFTAPNTPQQNAPVENAIWRLMKGGTVCRRSAVLEFGIDYSGIPNMDSRGDRLWLESVRFTAACFNRSGTKANPGNMSPYEVFTGTKPDAIIVPFLQPLIMRKQRVIKLDDQGEPGYYLGQSHQHGRSTVRVLK 444
            D   +F+ E D   V  G +     G   D  AA       A+ P   PF +G T  +++IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG R   PR  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G +++ RVD GTEWT   FR FC + GI +EFT P  PQ N  VE+AIWR+MK G   RRSA     +D++ IP +D RGDRLW+ES ++ A   N+S TKANPG  SP+E+FTG +    ++PF QP  MR+ R  KLDDQ    YYL     H   TV+VLK
Sbjct:   25 DFFPVFIPECDAANVA-GVFDSIDGGADFDLGAA-------ALGPGASPFALGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRGSVPRGPGARASKPLGRIHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRVESSRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAARVLNVDFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLK 358

[Close]

BLAST of mRNA_C-linearis_contig10.459.1 vs. uniprot
Match: A0A6H5KJH0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH0_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 1.140e-92
Identity = 165/352 (46.88%), Postives = 212/352 (60.23%), Query Frame = 0

Query:  117 FVPNGDYGEYANGPLSDTAAALLLRAFAAIAPKRRPFRVGPTTNALEINYFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTPRA-GGRASEPGVTYHLDLCGAVTASLCGCMYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTEWTSDPFRMFCANAGIRMEFTAPNTPQQNAPVENAIWRLMKGGTVCRRSAVLEFGIDYSGIPNMDSRGDRLWLESVRFTAACFNRSGTKANPGNMSPYEVFTGTKPDAIIVPFLQPLIMRKQRVIKLDDQGEPGYYLGQSHQHGRSTVRVLKVSTGRPCHSRDIVFISGAAASAG 467
            F+P  D    A    S    +      AA+ P   PF +G T  +++IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG R   PR  G RAS+P    HLDLCG +  S+ G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G I+  RVD GTEWT   FR FC + GI +EFT P  PQ N  VE+AIWR+MK G V RRSA L   ++++ I  +D RGDRLW+ES ++ A   N+S TKANPG  SP+E+FTG +    ++PF QP  MR+ R  KLDDQ    YYL     H   TV+VLK STGR  ++ ++ +++ A A  G
Sbjct:  215 FIPESDAANVAGVLDSIDGGSDFDLGAAALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRGSVPRGPGARASKPLGCVHLDLCGPLMPSMGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMVARRSAALVLNVEFASITGLDPRGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEG 566

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BLAST of mRNA_C-linearis_contig10.459.1 vs. uniprot
Match: A0A6H5J8D5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8D5_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 2.410e-92
Identity = 171/365 (46.85%), Postives = 216/365 (59.18%), Query Frame = 0

Query:  117 FVPNGDYGEYANGPLSDTAAALLLRAFAAIAPKRRPFRVGPTTNALEINYFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTPRA-GGRASEPGVTYHLDLCGAVTASLCGCMYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTEWTSDPFRMFCANAGIRMEFTAPNTPQQNAPVENAIWRLMKGGTVCRRSAVLEFGIDYSGIPNMDSRGDRLWLESVRFTAACFNRSGTKANPGNMSPYEVFTGTKPDAIIVPFLQPLIMRKQRVIKLDDQGEPGYYLGQSHQHGRSTVRVLKVSTGRPCHSRDIVFISGAAASAG--KGEKLAPEFPP 478
            F+P  D    A    S    A      AA+ P   PF +G T  +++IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG R   PR  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G ++  RVD GTEWT   FR FC + GI +EFT P  PQ N  VE+AIWR+MK G   RRSA   F +D++ IP +D RGDRLW+ES ++ A   N+S TKANPG  SP+E+FTG +    ++PF QP  MR+ R  KLDDQ     YL     H   TV+VLK STGR  ++ ++ +++ A A  G   G   AP  PP
Sbjct:  539 FIPESDAANVAGVLDSIDGGADFDLGAAALGPGASPFALGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRGSVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRVECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFNVDFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCSYLNGGENHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPP 903

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BLAST of mRNA_C-linearis_contig10.459.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 3.130e-92
Identity = 187/419 (44.63%), Postives = 236/419 (56.32%), Query Frame = 0

Query:   65 ASVVPSTGVFPPTNTGVVTFLDGSVMQIPYTLEGL--RLGSDVLNIFLDEGDMEFVPNGDYGEYANGPLSDTAAALLLRAFAAIAPKRRPFRVGPTTNALEINYFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTPRA-GGRASEPGVTYHLDLCGAVTASLCGCMYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTEWTSDPFRMFCANAGIRMEFTAPNTPQQNAPVENAIWRLMKGGTVCRRSAVLEFGIDYSGIPNMDSRGDRLWLESVRFTAACFNRSGTKANPGNMSPYEVFTGTKPDAIIVPFLQPLIMRKQRVIKLDDQGEPGYYLGQSHQHGRSTVRVLKVSTGRPCHSRDIVFISGAAASAG--KGEKLAPEFPP 478
            AS     G FP  + G     D SV+     ++G       D   +F+ E D   V  G       G   D  AA       A+ P   PF +G T  +++IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG RA  PR  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G I+  RVD GTEWT   FR FC + GI +EFT P  PQ N  VE+AIWR+MK G   RRSA   F +D++ IP +D RGDRLW+ES ++ A   N+S TKANPG  SP+E+FTG +    ++PF QP  MR+ R  KLDDQ    YYL     H   TV+VLK STGR  ++ ++ +++ A A  G   G   AP  PP
Sbjct:  702 ASGFECVGTFPGMDLG-----DTSVLTDEQLMDGYDDTPHQDFFPVFIPESDAANVA-GVLDSIDGGSDFDLGAA-------ALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFHVDFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPP 1107

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BLAST of mRNA_C-linearis_contig10.459.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 3.750e-92
Identity = 187/419 (44.63%), Postives = 236/419 (56.32%), Query Frame = 0

Query:   65 ASVVPSTGVFPPTNTGVVTFLDGSVMQIPYTLEGL--RLGSDVLNIFLDEGDMEFVPNGDYGEYANGPLSDTAAALLLRAFAAIAPKRRPFRVGPTTNALEINYFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTPRA-GGRASEPGVTYHLDLCGAVTASLCGCMYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTEWTSDPFRMFCANAGIRMEFTAPNTPQQNAPVENAIWRLMKGGTVCRRSAVLEFGIDYSGIPNMDSRGDRLWLESVRFTAACFNRSGTKANPGNMSPYEVFTGTKPDAIIVPFLQPLIMRKQRVIKLDDQGEPGYYLGQSHQHGRSTVRVLKVSTGRPCHSRDIVFISGAAASAG--KGEKLAPEFPP 478
            AS     G FP  + G     D SV+     ++G       D   +F+ E D   V  G       G   D  AA       A+ P   PF +G T  +++IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG RA  PR  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G I+  RVD GTEWT   FR FC + GI +EFT P  PQ N  VE+AIWR+MK G   RRSA   F +D++ IP +D RGDRLW+ES ++ A   N+S TKANPG  SP+E+FTG +    ++PF QP  MR+ R  KLDDQ    YYL     H   TV+VLK STGR  ++ ++ +++ A A  G   G   AP  PP
Sbjct:  556 ASGFECVGTFPGMDLG-----DTSVLTDEQLMDGYDDTPHQDFFPVFIPESDAANVA-GVLDSIDGGSDFDLGAA-------ALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFHVDFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPP 961

[Close]

BLAST of mRNA_C-linearis_contig10.459.1 vs. uniprot
Match: A0A6H5LE52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE52_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 5.470e-92
Identity = 184/427 (43.09%), Postives = 237/427 (55.50%), Query Frame = 0

Query:   71 TGVFPPTNTGVVTFLDGSVMQIPYTLEGLRLGSDVLNIFLDEGDMEFVPNGDYGEYANGPLSDTAAALLLRAF------------AAIAPKRRPFRVGPTTNALEINYFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTPRA-GGRASEPGVTYHLDLCGAVTASLCGCMYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTEWTSDPFRMFCANAGIRMEFTAPNTPQQNAPVENAIWRLMKGGTVCRRSAVLEFGIDYSGIPNMDSRGDRLWLESVRFTAACFNRSGTKANPGNMSPYEVFTGTKPDAIIVPFLQPLIMRKQRVIKLDDQGEPGYYLGQSHQHGRSTVRVLKVSTGRPCHSRDIVFISGAAASAG--KGEKLAPEFPPRSSV 482
            T V PP  +  V  L  S  +   T  G+ LG    ++F DE  M+      Y ++    + +  AA+                 AA+ P   PF +G T  +++IN FHR   H CE LLRETA+Q+GI LTG LE C  C+  KG RA  P+  G RAS+P    HLDLCG +  SL G +YL V VDS SR+   YGLRRKS AL   K  + D+ +Y  G I+  R+D GTEWT   FR  C + GI +EFT P  PQ N  VE+AIWR+MK G   RRSA     +DY+ I  +D RGDRLWLES ++ A   N+S TKANPG  SP+E+FTG +    ++PF QP  MR+ R  KLDDQ    YYL     H   TV+VLK STGR  ++ ++  ++ A A  G   G   AP  PP + V
Sbjct:  413 TTVVPPAGSTDVVPLSASGFECVGTFPGMDLGDT--SVFTDELLMDGYDKTPYQDFFPAFMPENEAAIAAGVMDGIDGVGFDVGVAALGPGASPFSIGSTDKSVDINRFHRSLAHACEPLLRETARQRGITLTGTLEPCSDCMKAKGKRASVPKGPGARASKPLGRVHLDLCGPLAPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRIDNGTEWTRGEFRRCCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAARVLNVDYASITGLDPRGDRLWLESAKWAADALNQSATKANPGRRSPHELFTGQQGPFRVLPFFQPGYMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSCVTSAPAGKGGSAGIPAAPTPPPFTPV 837

[Close]

BLAST of mRNA_C-linearis_contig10.459.1 vs. uniprot
Match: A0A6H5KBH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH5_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 2.840e-91
Identity = 168/375 (44.80%), Postives = 212/375 (56.53%), Query Frame = 0

Query:  117 FVPNGDYGEYANGPLSDTAAALLLRAFAAIAPKRRPFRVGPTTNALEINYFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPCVLVKGARAHTPRA-GGRASEPGVTYHLDLCGAVTASLCGCMYLLVVVDSFSRFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTEWTSDPFRMFCANAGIRMEFTAPNTPQQNAPVENAIWRLMKGGTVCRR--------------------------SAVLEFGIDYSGIPNMDSRGDRLWLESVRFTAACFNRSGTKANPGNMSPYEVFTGTKPDAIIVPFLQPLIMRKQRVIKLDDQGEPGYYLGQSHQHGRSTVRVLKVSTGRPCHSRDIVFISGAAA 464
            F+P  D    A    S    A      AA+ P   PF +G T  +++IN FHR   H CE LLRETA+Q+GI LTG+LE C  C+  KG RA  PR  G RAS+P    HLDLCG +  SL G +YLLV VDS SR+   YGLRRKS AL   K  + D+ +Y  G I+  RVD GTEWT   FR FC + GI +EFT P  PQ N  VE+AIWR+MK G   RR                          SA   F +D++ IP +D RGDRLW+ES ++ A   N+S TKANPG  SP+E+FTG +    ++PF QP  MR+    KLDDQ    YYL     H   TV+VLK STGR  ++ ++ +++ A A
Sbjct:  237 FIPESDAANVAGVLDSIDGGADFDLGAAALGPGASPFALGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLLVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRXXXXXXXXXXXXXXXXXXXXXXXXXXSAGRVFDVDFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDCCTKLDDQATLCYYLNGGENHPSGTVKVLKASTGRVVYTNNVSWVTSAPA 611

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig10.459.1 vs. uniprot

BLAST of mRNA_C-linearis_contig10.459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JZF4_9PHAE	6.640e-94	46.03	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JL48_9PHAE	1.740e-93	44.63	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5JG40_9PHAE	1.970e-93	47.67	Integrase catalytic domain-containing protein n=3 ...	[more]
A0A6H5KAL3_9PHAE	3.690e-93	47.37	Integrase catalytic domain-containing protein n=2 ...	[more]
A0A6H5KJH0_9PHAE	1.140e-92	46.88	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5J8D5_9PHAE	2.410e-92	46.85	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5J4N2_9PHAE	3.130e-92	44.63	Integrase catalytic domain-containing protein n=18...	[more]
A0A6H5KBD4_9PHAE	3.750e-92	44.63	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5LE52_9PHAE	5.470e-92	43.09	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KBH5_9PHAE	2.840e-91	44.80	Integrase catalytic domain-containing protein n=1 ...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 219..331 e-value: 1.8E-17 score: 63.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 216..397 score: 20.09
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 213..419 e-value: 5.3E-21 score: 76.7
None	No IPR available	PANTHER	PTHR11439:SF250		coord: 152..459
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 152..459
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 220..399

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig10	contig	C-linearis_contig10:862836..864590 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig10.459.1	mRNA_C-linearis_contig10.459.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig10 862363..864590 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig10.459.1 ID=prot_C-linearis_contig10.459.1|Name=mRNA_C-linearis_contig10.459.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=585bp
MLPSTGDTGVGPENAPGDMLSTCADVVPDVFGFSPIDDDDVVPWNNSSDE
PFCGAEGERFPSALASVVPSTGVFPPTNTGVVTFLDGSVMQIPYTLEGLR
LGSDVLNIFLDEGDMEFVPNGDYGEYANGPLSDTAAALLLRAFAAIAPKR
RPFRVGPTTNALEINYFHRCSGHLCEYLLRETAKQQGIKLTGRLETCVPC
VLVKGARAHTPRAGGRASEPGVTYHLDLCGAVTASLCGCMYLLVVVDSFS
RFMLAYGLRRKSAALDGFKVAITDLAKYGRGDIQTIRVDMGTEWTSDPFR
MFCANAGIRMEFTAPNTPQQNAPVENAIWRLMKGGTVCRRSAVLEFGIDY
SGIPNMDSRGDRLWLESVRFTAACFNRSGTKANPGNMSPYEVFTGTKPDA
IIVPFLQPLIMRKQRVIKLDDQGEPGYYLGQSHQHGRSTVRVLKVSTGRP
CHSRDIVFISGAAASAGKGEKLAPEFPPRSSVRRSAQLCHLHRQHRRIRR
RPTLRRRRSPRCRLRRPRNRSRCCRGRMAACGLAACDASAYSAVTHAAPA
AACAAARGRWATCGFADTGGDNASALSGGVAASIQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR036397	RNaseH_sf
IPR039537	Retrotran_Ty1/copia-like
IPR012337	RNaseH-like_sf