prot_C-linearis_contig10.450.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.450.1
Unique Nameprot_C-linearis_contig10.450.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length454
Homology
BLAST of mRNA_C-linearis_contig10.450.1 vs. uniprot
Match: A0A6H5JA60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA60_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 8.210e-107
Identity = 179/379 (47.23%), Postives = 242/379 (63.85%), Query Frame = 0
Query:   78 DLFVRTT-EECHERWASWPVIQEEGLATGNVLLFRVFNSIGNLFIVMEHIVQLAMMLEVAVVLDCEKFPGFRVAFDPATIKWDVDPTVIMQLLDRAANQDPNARFHQHVLKYRDGLLLLSDSRLLLLATKLNLVGASLSETVTAVRGADFPNLRNLAPVVIEGSL-QPDPCAWNLFLRRSPSMIQSMVAQSPWVAADGVPQDDVHPTKYVAWHIRTSDGETMHSFNPERHRYIFHGQSSESVFPVFLAATKGGEDQCPSAFPGGEHDTPIYISSNSKEMARNCSSGVAEQGVVPGLIDLGLVGNDGHTAYSKNPTAAAVGAFIDYLYLMDADIIVRSGSSFSGTVVKIKGMGCRQAL--PGVGVSASGPGLVVCLPSSC 452
            D FV TT ++CH  W SWP +QE  +A G VL+F +F S+GNLFI + ++++ A +LEVA+ L  +KFPGFR AFD A+IKWD+DPT ++Q  +         R +   LK+ DG L+LS  +L  LA +  +   SL+E   AV+   + +LR L+  +   ++  P+ CAWN+ LRRSPSMI S+ A +PW  +   P+    P  YVAWH+RTSDGE+ HSFNP+ H YI HGQSS +V P+FL+AT   E  CP  F       P+YISSNSK MARNC++  AE  V  G +DLG+   D HT +SKNP A A+ AFIDYLYLMD+ +I+++GSSFS TV ++K + CR+    P + V      L VCLP  C
Sbjct:  184 DRFVHTTGDDCHPLWTSWPAVQEAAIANGTVLVFDIFPSVGNLFITLGNLIKTARLLEVALFLKWDKFPGFRAAFDTASIKWDLDPTTVVQKAEELTLGAEVDRLYP--LKFSDGNLVLSSQQLEALAIQTGIPDTSLAEMAVAVKER-WSSLRRLSQAIAGSAVVPPETCAWNMLLRRSPSMIASLEAHNPWTPSGFGPR----PKDYVAWHVRTSDGESEHSFNPDVHTYILHGQSSTTVVPIFLSATDAAEKMCPKMFHEDAPKMPVYISSNSKSMARNCTALAAEHDVTAGFVDLGIDDLDAHTTFSKNPNATALNAFIDYLYLMDSSVIIQTGSSFSSTVARVKSLKCREVEHPPELPVKR----LNVCLPHDC 551          
BLAST of mRNA_C-linearis_contig10.450.1 vs. uniprot
Match: A0A6H5L1Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z7_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 7.270e-100
Identity = 172/378 (45.50%), Postives = 234/378 (61.90%), Query Frame = 0
Query:   83 TTEECHERWASWPVIQEEGLATGNVLLFRVFNSIGNLFIVMEHIVQLAMMLEVAVVLDCEKFPGFRVAFDPATIKWDVD-PTVIMQLLDRAANQDPNARFHQHVLKYRDGLLLLSDSRLLLLATKLNLVGASLSETVTAVRG--ADFPNLRNLAPVVIEGS-LQPDPCAWNLFLRRSPSMIQSMVAQSPWVAADGVPQDDVHPTKYVAWHIRTSDGETMHSFNPERHRYIFHGQSSESVFPVFLAATKGGEDQCPSAFPGGEHDTPIYISSNSKEMARNCS----SGVAEQGVVPGLIDLGLVGNDGHTAYSKNPTAAAVGAFIDYLYLMDADIIVRSGSSFSGTVVKIKGMGCRQALPGVGVSASGPGLVVCLPSSC 452
            T ++C   W+SWP +QE  +A G V++F VF S+GN+F+++ +I++ A +LEVA++L+ ++F GFR AFDPA+IKWD+D PT++ Q   R+   +    +      + DG ++LS  +L  +A K+ L G S+ E   A+    +    L  L+   ++       PCAWN+ LRRSP+M+ S+ A +PW+  +  P+    P KYVAWHIRTS GET  SF P  H YIFH QSS SV P+FL+AT   E  CP  F      TP+YISSNSK MARNC+    +  AE  V PG +DLG+   D HT +SKNP A A+ AFIDYLYLMD+ IIV++GSSFS TV  IKGM C       G+      L VCLP+ C
Sbjct:    4 TDDDCDSTWSSWPSVQEAAVARGTVVVFNVFPSVGNMFVILHNIIKTARLLEVALLLNWQRFEGFREAFDPASIKWDLDQPTLVQQAAPRSQGAEAERLYP---FTFPDGQMVLSHWQLETIARKVGLPGTSVDEMAAALEEGYSKIGGLGRLSRETVQNERFSVLPCAWNMLLRRSPAMMASLEAHNPWMTHEFNPR----PKKYVAWHIRTSHGETNGSFTPHVHTYIFHRQSSTSVLPIFLSATDAAERMCPRFFDQDVPITPVYISSNSKTMARNCTVLAATLAAEHKVGPGFVDLGIDDVDAHTTFSKNPKATALNAFIDYLYLMDSSIIVQTGSSFSFTVASIKGMSCHGVAKPEGLPVKN--LNVCLPADC 372          
BLAST of mRNA_C-linearis_contig10.450.1 vs. uniprot
Match: A0A6H5JS37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS37_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 2.550e-77
Identity = 145/376 (38.56%), Postives = 226/376 (60.11%), Query Frame = 0
Query:   86 ECHERWASWPVIQEEGLATGNVLLFRVFNSIGNLFIVMEHIVQLAMMLEVAVVLDCEKFPGFRVAFDPATIKWDVDPTVIMQLLDRAANQDPNARFHQHVLKYRDGLLLLSDSRLLLLATKLNLVGASLSETVTAVRGADFPNLRNLAPVVIE----GSLQ-----PDPCAWNLFLRRSPSMIQSMVAQSPWVAADGVPQDDVHPTKYVAWHIRTSDGETMHSFNPERHRYIFHGQSSESVFPVFLAATKGGEDQCPSAFPGGEHDTPIYISSNSKEMARNCSSGVAEQGVVPGLIDLGLVGNDGHTAYSKNPTAAAVGAFIDYLYLMDADIIVRSGSSFSGTVVKIKGMGCRQALPGVGVSASGPGLVVCLPSSC 452
            EC E W +WP +QE  +A G V++F + + +GN F+ + +I+Q+A  LE+ +V++ + F GFR AFD   +KWD+D     +     +     + FH  + ++ DG ++L D +L +LA+K   VG ++         A    L+ + PV I     G LQ       PC WN+F+RRS +M++ + A +PW   +G         KY+A+ IRT++GET  SF+P+ H YIF+   S  V   + AAT+  +  CP+AF   E D P++ISSNS  MARNCS+  A + ++PGL+D+G+   D HT +S +P  AA+ AF+D+L+++DA+++VR+ SSFSGT V++KGM C +A   V +  SG  L VC+P+ C
Sbjct:  222 ECDELWRTWPAMQESAIANGTVVVFDLVSRVGNAFMDLRNIIQVARWLELGLVINWKGFQGFRDAFDTGELKWDIDTEPFRRRAKEISRGVNPSGFH--LFRFYDGFMVLCDHQLTMLASK---VGIAIQHP-----DAMMLQLKKVFPVKIRYWISGGLQNGLPASQPCTWNMFVRRSAAMMRRLEAYNPW-RVEGSSMSRFQ--KYIAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFAATEEAKGACPAAFNADEGDVPLFISSNSMSMARNCSAEAAGRKMLPGLVDVGVPVGDAHTTFSAHPKIAALKAFVDFLFILDAEVVVRTASSFSGTAVEMKGMNCFEAKVSVEMPISG--LYVCVPAGC 582          
BLAST of mRNA_C-linearis_contig10.450.1 vs. uniprot
Match: A0A6H5KDJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ4_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 1.510e-72
Identity = 139/321 (43.30%), Postives = 196/321 (61.06%), Query Frame = 0
Query:  132 MLEVAVVLDCEKFPGFRVAFDPATIKWDVDPTVIMQLLDRAANQDPNARFHQHVLKYRDGLLLLSDSRLLLLATKLNLVGASLSETVTAVRGADFPNLRNLAPVVIEGSLQPDPCAWNLFLRRSPSMIQSMVAQSPWVAADGVPQDDVHPTKYVAWHIRTSDGETMHSFNPERHRYIFHGQSSESVFPVFLAATKGGEDQCPSAFPGGEHDTPIYISSNSKEMARNCSSGVAEQGVVPGLIDLGLVGNDGHTAYSKNPTAAAVGAFIDYLYLMDADIIVRSGSSFSGTVVKIKGMGCRQALPGVGVSASGPGLVVCLPSSC 452
            MLEVA++++ ++FP FRVAF+P  IKWD+D T   +L     ++  +A   +H L++ DG L++SD +L +++     VG+     + A     F N            L P PCAWN+ LRRSP+M+ SM A +PWV A   P+   H   Y AWHIRTS+GET  SF+ +R  YIF+  +S+S+ P+F++  +  E+ CPS F G  +D+P+YISSNSK  ARNCS+   ++ +    +DLG+   D HTA+SKNP    V AFID+LYLMDADIIVR+ SSFSG ++ IK   C  A  G  +      L VC+P+ C
Sbjct:    1 MLEVALIINLDQFPAFRVAFEPEVIKWDLD-TEPFKLRGGEISKGVDAE-DRHALQFLDGFLIVSDHQLEVMSASFG-VGSGTHSGIKAGFRKAFKNRWRHYLATANLDLAP-PCAWNMVLRRSPTMMNSMEAHTPWVTAGDSPRAHAH---YHAWHIRTSEGETERSFSKQR--YIFNNVASQSICPMFVSTREASEEACPSRFSG--NDSPVYISSNSKSTARNCSAEARKKDIETAFVDLGINAQDAHTAFSKNPDTV-VNAFIDFLYLMDADIIVRTASSFSGAIIDIKSYRCMDAYLGK-LPVFRMHLFVCVPADC 308          
BLAST of mRNA_C-linearis_contig10.450.1 vs. uniprot
Match: A0A6H5JUR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUR5_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 1.120e-61
Identity = 105/207 (50.72%), Postives = 136/207 (65.70%), Query Frame = 0
Query:  246 CAWNLFLRRSPSMIQSMVAQSPWVAADGVPQDDVHPTKYVAWHIRTSDGETMHSFNPERHRYIFHGQSSESVFPVFLAATKGGEDQCPSAFPGGEHDTPIYISSNSKEMARNCSSGVAEQGVVPGLIDLGLVGNDGHTAYSKNPTAAAVGAFIDYLYLMDADIIVRSGSSFSGTVVKIKGMGCRQALPGVGVSASGPGLVVCLPSSC 452
            CAWN+ LRRS S++ S+ A +PW  A         P +YVAWHIRTS+GET  SF+P+ H+YIF+GQ+S +VFP+FL+AT   E  CP  +       P+YISSNSK M+RNC++  AE  +  G +DLG+  +D HT YS NP A A+ AFIDYLYLMD+ IIV++GSSF+ TV  IKG  CR A    G       L +CLP+ C
Sbjct:   19 CAWNMLLRRSHSIMASLDANNPWTPAGF----GSRPAEYVAWHIRTSNGETKESFSPDVHQYIFNGQTSAAVFPLFLSATSFAEKACPKLYHDNIPIMPVYISSNSKTMSRNCTALAAENKIQSGFVDLGIADSDAHTGYSANPDATALNAFIDYLYLMDSSIIVQTGSSFAFTVASIKGTSCRGAPKTKGAPVRS--LYICLPNDC 219          
BLAST of mRNA_C-linearis_contig10.450.1 vs. uniprot
Match: D8LBV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV4_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 7.890e-41
Identity = 101/286 (35.31%), Postives = 160/286 (55.94%), Query Frame = 0
Query:   86 ECHERWASWPVIQEEGLATGNVLLFRVFNSIGNLFIVMEHIVQLAMMLEVAVVLDCEKFPGFRVAFDPATIKWDVDPTVIMQLLDRAANQDPNARFHQHVLKYRDGLLLLSDSRLLLLATKLNLVGASLSETVTAVRGADFP--NLRNLAPVVIE----GSLQ-----PDPCAWNLFLRRSPSMIQSMVAQSPWVAADGVPQDDVHPTKYVAWHIRTSDGETMHSFNPERHRYIFHGQSSESVFPVFLAATKGGEDQCPSAFPGGEHDTPIYISSNSKEMARNCSS 360
            EC E W +WP +QE  +A G V++F + + +GN F+ + +I+Q+A  LE+ +V++ + F GFR AFD   +KWD+D T   +   +A ++  N     H+  + DG ++L D +L +LA+K+ +          A++  D     L+ + PV I     G LQ       PC WN+F++RS SM++S+   +PW   +G         KYVA+ IRT++GET  SF+P+ H YIF+   S  V   +  AT+  +  CP+AF   E D P++ISSNS  + R+  S
Sbjct:  222 ECDELWRTWPAMQESAIANGTVVVFDLVSRVGNAFMDLRNIIQVARWLELGLVVNWKGFQGFRDAFDTGELKWDID-TEPFRRRAKAISRGVNPSGF-HLFWFYDGFMVLCDHQLTMLASKMGI----------AIQHPDAMVLQLKKVFPVKIRYWISGRLQNGLPASQPCTWNMFVKRSASMMRSLEVYNPW-RVEGSSMSRFQ--KYVAFQIRTTEGETAGSFDPKIHTYIFNNLRSTVVCNWYFTATEEAKGVCPAAFNADEGDVPLFISSNSIVLLRHSCS 492          
BLAST of mRNA_C-linearis_contig10.450.1 vs. uniprot
Match: D7G5J4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5J4_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 2.390e-25
Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = 0
Query:  245 PCAWNLFLRRSPSMIQSMVAQSPWVAADGVPQDDVHPTKYVAWHIRTSDGETMHSFNPERHRYIFHGQSSESVFPVFLAATKGGEDQCPSAFPGGEHDTPIYISSN 350
            PCAWN+ LRRSP+M+ SM A +PWV     P+   H   Y AWHIRTS+GET  SF+ +R  YIF+  +SES+ P+F++  +  E+ CPS F G   D+P+YISSN
Sbjct:   41 PCAWNMVLRRSPTMMNSMEAHTPWVTVGDSPRTRAH---YHAWHIRTSEGETERSFSKQR--YIFNNVASESICPMFVSTREASEEACPSRFSG--KDSPVYISSN 139          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.450.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JA60_9PHAE8.210e-10747.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1Z7_9PHAE7.270e-10045.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JS37_9PHAE2.550e-7738.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDJ4_9PHAE1.510e-7243.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUR5_9PHAE1.120e-6150.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBV4_ECTSI7.890e-4135.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5J4_ECTSI2.390e-2550.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..453
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.827

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:415019..419975 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.450.1mRNA_C-linearis_contig10.450.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 413104..420429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.450.1 ID=prot_C-linearis_contig10.450.1|Name=mRNA_C-linearis_contig10.450.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=454bp
MRQRRTFLLLLAALPAFFGTAAQDSGGDIDLERRAGTDKSLRALRHGTTP
TDKSASRHGTTTSLESSTSRALITGEPDLFVRTTEECHERWASWPVIQEE
GLATGNVLLFRVFNSIGNLFIVMEHIVQLAMMLEVAVVLDCEKFPGFRVA
FDPATIKWDVDPTVIMQLLDRAANQDPNARFHQHVLKYRDGLLLLSDSRL
LLLATKLNLVGASLSETVTAVRGADFPNLRNLAPVVIEGSLQPDPCAWNL
FLRRSPSMIQSMVAQSPWVAADGVPQDDVHPTKYVAWHIRTSDGETMHSF
NPERHRYIFHGQSSESVFPVFLAATKGGEDQCPSAFPGGEHDTPIYISSN
SKEMARNCSSGVAEQGVVPGLIDLGLVGNDGHTAYSKNPTAAAVGAFIDY
LYLMDADIIVRSGSSFSGTVVKIKGMGCRQALPGVGVSASGPGLVVCLPS
SCL*
back to top