prot_C-linearis_contig10.442.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.442.1
Unique Nameprot_C-linearis_contig10.442.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length346
Homology
BLAST of mRNA_C-linearis_contig10.442.1 vs. uniprot
Match: A0A6H5K4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H1_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 9.380e-48
Identity = 225/342 (65.79%), Postives = 254/342 (74.27%), Query Frame = 0
Query:   11 SRCLDAILVALNHTSSSGESWYVSKTQLQLASIELCTACRRLATFQLTIDDNIPRRLLSYAD------APAPTLELGRYLSPRVPRLKARIAAWHRRSCEELGRPIYALTEAQFLVFGSGFDKSVDGVSWPKGLKMISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQKLDRE--WPKSLRHLALDRGFTQALHGLGRWMPNLEELELVVNSDDYVASLADVVWPASLKKLALPKKLWDRNAATLPKGVELDVFF 344
            SRCL+A  VAL  T    ESWYVS TQLQLAS+  C ACR   T  LT+DD+IPRRLL+         APA   + GR    RVPR  AR   WHR+SC EL   IYAL E  F +   GF++++  V+WP+ L+ +     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +D+E  W KSL +L L R F Q+LHG+GRW P+LEEL L V+  +Y  SLA V WP  LKK+ + K LWD+++A  P GVE DVFF
Sbjct:   28 SRCLEAFRVALQQTCLDRESWYVSTTQLQLASLPFCLACRDSVTLCLTVDDSIPRRLLADVGGNEAVVAPAGPCQCGR---SRVPRFHAREVTWHRQSCVELSASIYALAEVDFFILDGGFNRAIGAVAWPRKLRRLEFGDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDQEADWLKSLEYLRLGRWFNQSLHGIGRWAPDLEELNLRVDGQEYGLSLAGVEWPTGLKKMTVDKTLWDKHSAAFPLGVEWDVFF 366          
BLAST of mRNA_C-linearis_contig10.442.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 4.010e-24
Identity = 61/131 (46.56%), Postives = 80/131 (61.07%), Query Frame = 0
Query:   11 SRCLDAILVALNHTSSSGESWYVSKTQLQLASIELCTACRRLATFQLTIDDNIPRRLLSYADAPAPTLELGRYLSPRVPRLKARIAAWHRRSCEELGRPIYALTEAQFLVFGSGFDKSVDGVSWPKGLKMI 141
            S CL  + VALN T   G+SWY S  +LQLAS+ELC ACR   T  LT+D + PRRLL+ ADAP+P  +  R    RVPRL+AR A W+  +   +   I+A  +  +L FG  F  S+D + WP+ LK I
Sbjct:  134 SSCLKTLTVALNETCD-GKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPK--RLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTI 261          
BLAST of mRNA_C-linearis_contig10.442.1 vs. uniprot
Match: A0A6H5K0U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0U4_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 6.580e-18
Identity = 53/130 (40.77%), Postives = 71/130 (54.62%), Query Frame = 0
Query:   11 SRCLDAILVALNHTSSSG--ESWYVSKTQLQLASIELCTACRRLATFQLTIDDNIPRRLLSYADAPAPTLELGRYLSPRVPRLKARIAAWHRRSCEELGRPIYALTEAQFLVFGSGFDKSVDGVSWPKGL 138
            SR LD ++V LN     G  + W+ S  +LQLAS++LC ACR  A   L ++ + P RLL+ AD+P+   E G     RVPRL+AR  +W   S + L   IYAL  AQ   F    +  +D V WP  L
Sbjct:   27 SRFLDVVIVVLNQACGDGGQKHWFASTKELQLASLQLCEACRDAAALHLRVNTSTPLRLLAPADSPSDGSEEG----TRVPRLRAREVSWDLTSADRLSSSIYALASAQVFTFSDSLNAVLDAVVWPTSL 152          
BLAST of mRNA_C-linearis_contig10.442.1 vs. uniprot
Match: A0A6H5KMU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU8_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 4.820e-14
Identity = 52/132 (39.39%), Postives = 68/132 (51.52%), Query Frame = 0
Query:   15 DAILVALNHTSSSGESWYVSKTQLQLASIELCTACRRLATFQLTIDDNIPRRLLSYADAPAPTLELGRYLSPRVPRLKARIAAWH-----RRSCEELGRPIYALTEAQFLVFGSGFDKSVDGVSWPKGLKMI 141
            DA+ +ALN  S     WY SK QLQLAS++LC ACRR+ T  LT++ ++   L  ++ A A    L      RVP L+ R   W+      R C +      A      LVFG  FD  VD V+WP GLK +
Sbjct:   17 DALDIALNQVSGVN-GWYTSKLQLQLASLQLCLACRRVPTSHLTVERDVLALLWPHSAAEATRSRLVSLGQSRVPALRPRKVTWNLATLSMRHCGD------AFESVDVLVFGDSFDYRVDRVTWPPGLKKL 141          
BLAST of mRNA_C-linearis_contig10.442.1 vs. uniprot
Match: D8LCS9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS9_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 6.400e-14
Identity = 53/150 (35.33%), Postives = 76/150 (50.67%), Query Frame = 0
Query:    4 EADPGGDSRCLDAILVALNHTSSSGESWYVSKTQLQLASIELCTACRRLATFQLTIDDNIPRRLLSYADAPAPTLELGRYLSPRVPRLKARIAAWHRRSCEELGRPIYAL-------TEAQFLVFGSG-------FDKSVDGVSWPKGLK 139
            + DP   SRCLDA++VAL + +  G+ WY   TQLQLAS++ CTACR + T  LT+D ++P RL +  D            + RVP  + R   W+        +PI AL        + + LV G G       F++ VDG+  P  L+
Sbjct:   76 QRDPPDRSRCLDALIVALTN-AGDGQGWYTPTTQLQLASLDFCTACRAVPTVHLTVDGDVPARLKAGIDNGG---------ASRVPAFRPRCVTWN--------KPIAALRGEDDVFADVRVLVLGHGLGRVGVRFNRWVDGLQLPPALQ 207          
BLAST of mRNA_C-linearis_contig10.442.1 vs. uniprot
Match: D7G241_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G241_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.350e-13
Identity = 60/147 (40.82%), Postives = 77/147 (52.38%), Query Frame = 0
Query:    4 EADPGGDSRCLDAILVALNHTSSSGESWYVSKTQLQLASIELCTACRRLATFQLTIDDNIPRRLLSYADAPAPTLELGRYLSP-------RVPRLKARIAAWHRRSCEELGRPIYAL-TEAQFLVF-GSGFDKSVDGVSWPKGLKMI 141
            +A+ GGDS+CL+A +VAL+ T   GE WY S  QLQLAS++LC ACR + T  L+++ + P  L + A A  P   L     P       RVP    R   W  R+  ELG     L    Q L+F G   D   DG SWP GLK +
Sbjct:    3 QAESGGDSQCLEAFVVALDLTCD-GEKWYASTQQLQLASLDLCKACRGVPTLALSVERSTPEYLWAEA-ARGPRGRLTGEKKPPAARTRTRVPPFGPRRVMWKLRA-RELGLARKELWANVQCLLFTGYHNDWVCDGFSWPTGLKRL 146          
BLAST of mRNA_C-linearis_contig10.442.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.760e-13
Identity = 48/134 (35.82%), Postives = 66/134 (49.25%), Query Frame = 0
Query:    9 GDSRCLDAILVALNHTSSSGESWYVSKTQLQLASIELCTACRRLATFQLTIDDNIPRRLLSYADAPAPTLELGRYLSPRVPRLKARIAAWHRRSCEELGRPIYALTEAQFLVFGSGFDKSVD-GVSWPKGLKMI 141
            G SRCLDA+++ALN   +SG  WY S  QLQLAS+ELC +CR +   +L +    P RL         T  + R    RVP ++AR   W             A +E      G GFD  +  G+ WP+ L ++
Sbjct:    8 GPSRCLDALIIALNQ--ASGGEWYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKLTLL 139          
BLAST of mRNA_C-linearis_contig10.442.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.980e-12
Identity = 48/133 (36.09%), Postives = 64/133 (48.12%), Query Frame = 0
Query:    9 GDSRCLDAILVALNHTSSSGESWYVSKTQLQLASIELCTACRRLATFQLTIDDNIPRRLLSYADAPAPTLELGRYLSPRVPRLKARIAAWHRRSCEELGRPIYALTEAQFLVFGSGFDKSVD-GVSWPKGLKM 140
            G SRCLDA+++ALN   +SG  WY S  QLQL S+ELC ACR +   +L +    P RL         T  + R    RVP ++AR   W             A +E      G GFD  +  G+ WP+ L +
Sbjct:   39 GPSRCLDALIIALNQ--ASGGEWYTSTMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGVALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKLTL 169          
BLAST of mRNA_C-linearis_contig10.442.1 vs. uniprot
Match: D7FUL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL9_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 3.850e-10
Identity = 49/140 (35.00%), Postives = 68/140 (48.57%), Query Frame = 0
Query:    2 EVEADPGGDSRCLDAILVALNHTSSSG--ESWYVSKTQLQLASIELCTACRRLATFQLTIDDNIPRRLLSYADAPAPTLELGRYLSPRVPRLKARIAAWHRRSCEELGRPIYALTEAQFLVFGSGFDKSVDGVSWPKGLK 139
            E  A P G SR LD  +V LN     G  + W+ S  +LQLAS++LC ACR  A   L +D + P RL + AD+P+   E       RVPRL+AR                      + L FG  F++ ++ VS+P  L+
Sbjct:   19 ESGAAPTG-SRFLDVAIVVLNQACGDGGQKHWFASTKELQLASLQLCEACRDAAALHLRVDTSTPLRLFAPADSPSDDSEE----DTRVPRLRAR----------------------EQLTFGRRFNRPLEAVSFPASLR 131          
BLAST of mRNA_C-linearis_contig10.442.1 vs. uniprot
Match: A0A6H5JR57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR57_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 7.010e-7
Identity = 41/98 (41.84%), Postives = 55/98 (56.12%), Query Frame = 0
Query:    9 GDSRCLDAILVALN--HTSSSGES----WYVSKTQLQLASIELCTACRRLATFQLTIDDNIPRRLLSYADAPAPTLELGRYLSP--RVPRLKARIAAW 98
            G SR LDA+ VALN  + S +G+     W+ S   LQLAS++LC ACR + T  + ID + PR L +      PT+  G Y +P  RVP L+A    W
Sbjct:   13 GYSRFLDALTVALNQAYDSRAGDGDNIRWFTSTLNLQLASVDLCRACRSVPTLLVKIDHDTPRSLWT------PTVYAGAYSAPSGRVPPLRAHGVRW 104          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5K4H1_9PHAE9.380e-4865.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPY7_9PHAE4.010e-2446.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0U4_9PHAE6.580e-1840.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMU8_9PHAE4.820e-1439.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS9_ECTSI6.400e-1435.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G241_ECTSI1.350e-1340.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FT95_ECTSI1.760e-1335.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA08_9PHAE1.980e-1236.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUL9_ECTSI3.850e-1035.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR57_9PHAE7.010e-741.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 191..233
e-value: 2.1E-5
score: 24.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 149..340
e-value: 4.3E-11
score: 43.8
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 119..324
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 114..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:264213..265828 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.442.1mRNA_C-linearis_contig10.442.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 263410..267844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.442.1 ID=prot_C-linearis_contig10.442.1|Name=mRNA_C-linearis_contig10.442.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=346bp
MEVEADPGGDSRCLDAILVALNHTSSSGESWYVSKTQLQLASIELCTACR
RLATFQLTIDDNIPRRLLSYADAPAPTLELGRYLSPRVPRLKARIAAWHR
RSCEELGRPIYALTEAQFLVFGSGFDKSVDGVSWPKGLKMISFGGDFDQG
VEDVAWPPALEEIAFGYNFDQPLNEIAWPALLLFLTLGYCFNHPIEAVSW
PPCLEALKLGNCFNQPIARVGWPASLQVLLFGHCFDQPIADVGWPTSLQV
LKFGWNFNQKLDREWPKSLRHLALDRGFTQALHGLGRWMPNLEELELVVN
SDDYVASLADVVWPASLKKLALPKKLWDRNAATLPKGVELDVFFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf