prot_C-linearis_contig10.439.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.439.1
Unique Nameprot_C-linearis_contig10.439.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length318
Homology
[Close]
BLAST of mRNA_C-linearis_contig10.439.1 vs. uniprot
Match: D7FTJ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTJ8_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 2.770e-118
Identity = 200/264 (75.76%), Postives = 212/264 (80.30%), Query Frame = 0 
Query:   60 GGSTRFLAAPAAAETARAVAVSRRSMSSDTTGG-GSGSSGRFSDDLEKLISRAGEKVDRPGVAKAAAGEEGGALVSREGDAEGLEVEE-----DPKLSARAMKFRAMISKLKPQKKAVVVKTFTPSREPLVDNLGRSYGLGRRKTSTARVWISMSKGEGGVFTVNSRSMIDYFPRDHLQNEILKPLEYTRKLGSFHVRCTAKGGGQAGQAGAIRLGLSRALEAHDPWLRKFLKKEGMMERDSRKVERKKPGLKKARKAPQWVKR 317
            GG    L APA +     + VSRR MSS TTG   S SSGRFS+DLEKLISRAGE+ DR G  K+  GE+  A+                   DP LSARAMKFRAMISKL+PQKK  VVKTFTPSREPLVDNLGRSYGLGRRKTSTARVWIS+SKGEGGVF VNSR MIDYFPRDHLQNEILKPLEYT KLG+FHVRCTAKGGGQAGQAGAIRLGL+RALEAHDPWLRK LKKEGMMERDSR+VERKKPGLKKARKAPQWVKR
Sbjct:   59 GGKNPALPAPAGSA---GLVVSRRHMSSGTTGDDSSSSSGRFSEDLEKLISRAGERADRTG--KSGKGEKASAVXXXXXXXXXXXXXXXXXXXDPALSARAMKFRAMISKLRPQKKTAVVKTFTPSREPLVDNLGRSYGLGRRKTSTARVWISLSKGEGGVFMVNSRPMIDYFPRDHLQNEILKPLEYTNKLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKMLKKEGMMERDSRRVERKKPGLKKARKAPQWVKR 317
[Close]
BLAST of mRNA_C-linearis_contig10.439.1 vs. uniprot
Match: A0A7S2A920_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A920_TRICV)

HSP 1 Score: 151 bits (381), Expect = 4.320e-40
Identity = 80/140 (57.14%), Postives = 99/140 (70.71%), Query Frame = 0 
Query:  178 PSREPLVDNLGRSYGLGRRKTSTARVWISMSKGEGGVFTVNSRSMIDYFPRDHLQNEILKPLEYTRKLGSFHVRCTAKGGGQAGQAGAIRLGLSRALEAHDPWLRKFLKKEGMMERDSRKVERKKPGLKKARKAPQWVKR 317
            P R P +D+ GR+YGLGRRKT+TARVWI    G   V TVN    +DYF R+ L+ +IL P   TR  G F VRC   GGG++GQAGA+RLG++RALE ++P  R  +K +G+M RD R VERKK G KKARKAPQWV+R
Sbjct:  153 PVRVPQIDDRGRAYGLGRRKTATARVWIYPGSG---VVTVNKMPFVDYFEREALREDILSPFIVTRTCGQFDVRCYCHGGGKSGQAGAVRLGVARALEKYNPEYRPPMKHKGLMTRDPRMVERKKIGKKKARKAPQWVRR 289
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BLAST of mRNA_C-linearis_contig10.439.1 vs. uniprot
Match: A0A3R7JDC3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JDC3_9STRA)

HSP 1 Score: 149 bits (376), Expect = 5.330e-40
Identity = 78/135 (57.78%), Postives = 93/135 (68.89%), Query Frame = 0 
Query:  184 VDNLGRSYGLGRRKTSTARVWISMSKGE-GGVFTVNSRSMIDYFPRDHLQNEILKPLEYTRKLGSFHVRCTAKGGGQAGQAGAIRLGLSRALEAHDPWLRKFLKKEGMMERDSRKVERKKPGLKKARKAPQWVKR 317
            +D  GR+YG GRRKTSTARVW+  S    GG   VN + ++DYF RD  + E+LKP     K+G F V CT KGGG  GQAGA+R G++RAL+ +DP  R  LKK G+M RD R VERKKPG KKARK  QWVKR
Sbjct:   99 LDEKGRAYGTGRRKTSTARVWVKQSAEPFGGRIVVNKKDVVDYFVRDTHREEVLKPFSVIEKIGGFDVYCTVKGGGMTGQAGAVRHGIARALQNYDPEYRPALKKAGLMTRDPRMVERKKPGQKKARKKFQWVKR 233
[Close]
BLAST of mRNA_C-linearis_contig10.439.1 vs. uniprot
Match: A0A0L0D3D9_THETB (30S ribosomal protein S9 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D3D9_THETB)

HSP 1 Score: 145 bits (367), Expect = 1.290e-38
Identity = 78/139 (56.12%), Postives = 94/139 (67.63%), Query Frame = 0 
Query:  184 VDNLGRSYGLGRRKTSTARVWIS-----MSKGEGGVFTVNSRSMIDYFPRDHLQNEILKPLEYTRKLGSFHVRCTAKGGGQAGQAGAIRLGLSRALEAHDPWLRKFLKKEGMMERDSRKVERKKPGLKKARKAPQWVKR 317
            +D LGR+YG GRRKTS ARVW+       +     V  VNS+ + DYFP  H +N +++PL    KLG+F +R T KGGG  GQAGA+RLG+ RALE  DP  RK LK  GMM RD R VERK  GL+KAR+APQWVKR
Sbjct:   99 LDALGRAYGTGRRKTSIARVWVEPVAHPAAPQPADVLVVNSKPLADYFPAMHHRNHVIEPLRLLGKLGAFKIRATVKGGGHTGQAGALRLGICRALEIVDPAFRKPLKAAGMMTRDPRMVERKLAGLRKARRAPQWVKR 237
[Close]
BLAST of mRNA_C-linearis_contig10.439.1 vs. uniprot
Match: A0A8K1CU54_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU54_PYTOL)

HSP 1 Score: 147 bits (372), Expect = 2.400e-38
Identity = 81/135 (60.00%), Postives = 95/135 (70.37%), Query Frame = 0 
Query:  184 VDNLGRSYGLGRRKTSTARVWISMS-KGEGGVFTVNSRSMIDYFPRDHLQNEILKPLEYTRKLGSFHVRCTAKGGGQAGQAGAIRLGLSRALEAHDPWLRKFLKKEGMMERDSRKVERKKPGLKKARKAPQWVKR 317
            VD LGR+YG GRRKTSTARVW+  S K   G   VN + ++DYF RD  + +ILKP     ++G+F V CT KGGG +GQAGAIR GLSRAL+  DP  R  LKKE ++ RD R VERKKPG KKARK  QWVKR
Sbjct:  195 VDELGRAYGTGRRKTSTARVWVKRSDKPFDGRIKVNKKDLVDYFVRDTHREDILKPFSVIDEIGNFDVYCTVKGGGLSGQAGAIRHGLSRALQNFDPNYRPLLKKEKLLTRDPRMVERKKPGQKKARKKFQWVKR 329
[Close]
BLAST of mRNA_C-linearis_contig10.439.1 vs. uniprot
Match: A0A6S9GRK8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GRK8_HETAK)

HSP 1 Score: 144 bits (362), Expect = 6.880e-38
Identity = 80/139 (57.55%), Postives = 99/139 (71.22%), Query Frame = 0 
Query:  179 SREPLVDNLGRSYGLGRRKTSTARVWISMSKGEGGVFTVNSRSMIDYFPRDHLQNEILKPLEYTRKLGSFHVRCTAKGGGQAGQAGAIRLGLSRALEAHDPWLRKFLKKEGMMERDSRKVERKKPGLKKARKAPQWVKR 317
            ++EP +D+ GRSYG GRRK + ARVWI    GEG  FTVNS+ M +YF R   Q+++ KP   +     F V CT +GGG  GQAGA+RLGLSRALE ++P+ R  LKKEG++ RD+R VERKKPG KKARK  QWVKR
Sbjct:  101 TKEPKIDDQGRSYGTGRRKAAIARVWIK--PGEGN-FTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCTVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 236
[Close]
BLAST of mRNA_C-linearis_contig10.439.1 vs. uniprot
Match: A0A225UXJ6_9STRA (Mitochondrial/chloroplast ribosomal protein S9 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UXJ6_9STRA)

HSP 1 Score: 143 bits (361), Expect = 7.990e-37
Identity = 75/135 (55.56%), Postives = 94/135 (69.63%), Query Frame = 0 
Query:  184 VDNLGRSYGLGRRKTSTARVWIS-MSKGEGGVFTVNSRSMIDYFPRDHLQNEILKPLEYTRKLGSFHVRCTAKGGGQAGQAGAIRLGLSRALEAHDPWLRKFLKKEGMMERDSRKVERKKPGLKKARKAPQWVKR 317
            +D+ GR+YG GRRKTS ARVW+   ++   G   VN + ++DYF RD  + E+LKP     ++G F V CT KGGG  GQAGA+R G++RAL+A DP LR  LKKEG++ RD R VERKKPG  KARK  QWVKR
Sbjct:  186 LDSKGRAYGTGRRKTSVARVWVKPAAQPFTGRVQVNKKDLVDYFVRDTHREEVLKPFSVVEQIGGFDVYCTVKGGGMTGQAGAVRHGIARALQAFDPELRPALKKEGLLTRDPRMVERKKPGQAKARKKFQWVKR 320
[Close]
BLAST of mRNA_C-linearis_contig10.439.1 vs. uniprot
Match: A0A1V9YGL8_9STRA (30S ribosomal protein S9 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGL8_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.130e-36
Identity = 77/135 (57.04%), Postives = 91/135 (67.41%), Query Frame = 0 
Query:  184 VDNLGRSYGLGRRKTSTARVWISMSKGEG-GVFTVNSRSMIDYFPRDHLQNEILKPLEYTRKLGSFHVRCTAKGGGQAGQAGAIRLGLSRALEAHDPWLRKFLKKEGMMERDSRKVERKKPGLKKARKAPQWVKR 317
            +D LGR+YG GRRKTS ARVWI  +  EG G   VN   M+DYF RD  ++E+L P    ++LG F V    +GGG +GQAGA R G+SRALE ++P  R  LKK G M RD R VERKKPG KKARK  QWVKR
Sbjct:  103 IDELGRAYGTGRRKTSNARVWIKPAAEEGKGTVRVNKMDMVDYFTRDTHRHELLLPFLEVKRLGDFDVMINVRGGGLSGQAGAARHGISRALEKYNPDFRSPLKKAGFMTRDPRMVERKKPGQKKARKQFQWVKR 237
[Close]
BLAST of mRNA_C-linearis_contig10.439.1 vs. uniprot
Match: A0A024G743_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G743_9STRA)

HSP 1 Score: 139 bits (351), Expect = 2.840e-36
Identity = 76/135 (56.30%), Postives = 91/135 (67.41%), Query Frame = 0 
Query:  184 VDNLGRSYGLGRRKTSTARVWISMSKGE-GGVFTVNSRSMIDYFPRDHLQNEILKPLEYTRKLGSFHVRCTAKGGGQAGQAGAIRLGLSRALEAHDPWLRKFLKKEGMMERDSRKVERKKPGLKKARKAPQWVKR 317
            VD+LGR+YG GRRKTSTARVWI  S     GV  VN + ++DYF RD  +  +L P     ++G F V C  +GGG +GQAGAIR G+SRAL+  DP  R  LK+EG + RD R VERKKPG  KARK  QWVKR
Sbjct:  101 VDDLGRAYGTGRRKTSTARVWIKKSSTPFRGVVRVNKKDVVDYFVRDSNREHVLSPFVAVDQVGHFDVMCNVRGGGLSGQAGAIRHGISRALQNFDPSYRPLLKEEGYLTRDPRMVERKKPGQPKARKKYQWVKR 235
[Close]
BLAST of mRNA_C-linearis_contig10.439.1 vs. uniprot
Match: A0A5D6Y1S3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1S3_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.000e-36
Identity = 76/139 (54.68%), Postives = 92/139 (66.19%), Query Frame = 0 
Query:  180 REPLVDNLGRSYGLGRRKTSTARVWISMSKGE-GGVFTVNSRSMIDYFPRDHLQNEILKPLEYTRKLGSFHVRCTAKGGGQAGQAGAIRLGLSRALEAHDPWLRKFLKKEGMMERDSRKVERKKPGLKKARKAPQWVKR 317
            R   VD  GR+YG GRRKTSTARVW+  S    GG   +N + M+DY  RD  + ++L+P     + G+F V CT KGGG  GQAGAIR G+SRAL+  DP  R  LKK+G++ RD R VERKKPG  KARK  QWVKR
Sbjct:  196 RHRKVDEQGRAYGTGRRKTSTARVWVKKSAEPFGGRIKINKKDMVDYLERDTHREDVLRPFSVVGETGNFDVYCTVKGGGLTGQAGAIRHGISRALQNFDPEFRAALKKDGLLTRDPRMVERKKPGQPKARKKYQWVKR 334
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTJ8_ECTSI2.770e-11875.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2A920_TRICV4.320e-4057.14Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A3R7JDC3_9STRA5.330e-4057.78Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A0L0D3D9_THETB1.290e-3856.1230S ribosomal protein S9 n=1 Tax=Thecamonas trahen... [more]
A0A8K1CU54_PYTOL2.400e-3860.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6S9GRK8_HETAK6.880e-3857.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A225UXJ6_9STRA7.990e-3755.56Mitochondrial/chloroplast ribosomal protein S9 n=1... [more]
A0A1V9YGL8_9STRA2.130e-3657.0430S ribosomal protein S9 n=1 Tax=Achlya hypogyna T... [more]
A0A024G743_9STRA2.840e-3656.30Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A5D6Y1S3_9STRA3.000e-3654.68Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 187..317
e-value: 5.7E-45
score: 154.7
IPR000754Ribosomal protein S9PFAMPF00380Ribosomal_S9coord: 194..317
e-value: 4.3E-42
score: 143.5
IPR000754Ribosomal protein S9PANTHERPTHR21569RIBOSOMAL PROTEIN S9coord: 161..317
NoneNo IPR availablePANTHERPTHR21569:SF128S RIBOSOMAL PROTEIN S9, MITOCHONDRIALcoord: 161..317
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..51
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 34..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..317
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 25..33
IPR020574Ribosomal protein S9, conserved sitePROSITEPS00360RIBOSOMAL_S9coord: 256..274
IPR023035Ribosomal protein S9, bacterial/plastidHAMAPMF_00532_BRibosomal_S9_Bcoord: 185..317
score: 28.064
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 189..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:216326..220173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.439.1mRNA_C-linearis_contig10.439.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 216103..220918 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.439.1 ID=prot_C-linearis_contig10.439.1|Name=mRNA_C-linearis_contig10.439.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=318bp
MASMATSAIPSSTAMLTKSPFARRAMTAAAAATSRRGSASLHSASTAAAS
ARDQTACGRGGSTRFLAAPAAAETARAVAVSRRSMSSDTTGGGSGSSGRF
SDDLEKLISRAGEKVDRPGVAKAAAGEEGGALVSREGDAEGLEVEEDPKL
SARAMKFRAMISKLKPQKKAVVVKTFTPSREPLVDNLGRSYGLGRRKTST
ARVWISMSKGEGGVFTVNSRSMIDYFPRDHLQNEILKPLEYTRKLGSFHV
RCTAKGGGQAGQAGAIRLGLSRALEAHDPWLRKFLKKEGMMERDSRKVER
KKPGLKKARKAPQWVKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR000754Ribosomal_S9
IPR020574Ribosomal_S9_CS
IPR023035Ribosomal_S9_bac/plastid
IPR020568Ribosomal_S5_D2-typ_fold