Homology
BLAST of mRNA_C-linearis_contig99.17168.1 vs. uniprot
Match: D7G7U7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U7_ECTSI) HSP 1 Score: 137 bits (344), Expect = 2.570e-37 Identity = 72/82 (87.80%), Postives = 78/82 (95.12%), Query Frame = 0 Query: 20 MPFSLTENIPFLALPVTLITLKITYDVLPPVAFLALVAVAIGCYMFYAGNKSPAAQRTAKKAEATADSLIQELTREEDRAKE 101
MPFSLTEN+PFLALP+ LITLK+TYDVLP +AFLALVAVA+GCYMFYAG SPAAQRTAKKAEATADSLI+ELTREEDRAKE
Sbjct: 1 MPFSLTENLPFLALPLALITLKVTYDVLPFMAFLALVAVAVGCYMFYAGKSSPAAQRTAKKAEATADSLIRELTREEDRAKE 82
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17168.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| D7G7U7_ECTSI | 2.570e-37 | 87.80 | Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 78..126 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 41..45 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 46..66 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..20 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 67..199 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 21..40 |
| None | No IPR available | TMHMM | TMhelix | | coord: 46..68 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig99.17168.1 ID=prot_C-linearis_contig99.17168.1|Name=mRNA_C-linearis_contig99.17168.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=200bp
TREAPPPPSSRPRISSPGTMPFSLTENIPFLALPVTLITLKITYDVLPPV
AFLALVAVAIGCYMFYAGNKSPAAQRTAKKAEATADSLIQELTREEDRAK
EEAARKQAAKDRKAAAKKQQEAARKAAVAAKEAAAAKLLAQQEEESKPRS
APQTQSSGKKQPKKKQPKKQPKAAQQVEEEDSDDEDDFLLRMADLERAR* back to top
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