Homology
BLAST of mRNA_C-linearis_contig99.17147.1 vs. uniprot
Match: A0A6H5L5E5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E5_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 1.570e-18 Identity = 45/49 (91.84%), Postives = 47/49 (95.92%), Query Frame = 0 Query: 24 LSFLISRVQQSRKRSRDDEGNGLLGFLQDSALIEVVDESDLEEDVAPLK 72
L FLISRVQQSRKR RDDEGNG+LGFLQDSALIEVVD+SDLEEDVAPLK
Sbjct: 34 LPFLISRVQQSRKRGRDDEGNGILGFLQDSALIEVVDDSDLEEDVAPLK 82
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig99.17147.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| A0A6H5L5E5_9PHAE | 1.570e-18 | 91.84 | Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... | [more] |
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 12..29 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..11 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 30..134 |
| None | No IPR available | TMHMM | TMhelix | | coord: 10..29 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig99.17147.1 ID=prot_C-linearis_contig99.17147.1|Name=mRNA_C-linearis_contig99.17147.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=134bp
MWRNTNVIPTSRLFHALLSTAFCLSFLISRVQQSRKRSRDDEGNGLLGFL
QDSALIEVVDESDLEEDVAPLKVSKLKGMISPTGDVFGIGCFARWLFQDI
VWRIHALTSNISASCIVLNNKDHRFPSFVFRRAA back to top
|