prot_C-linearis_contig98.17119.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig98.17119.1
Unique Name	prot_C-linearis_contig98.17119.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	501

Homology

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BLAST of mRNA_C-linearis_contig98.17119.1 vs. uniprot
Match: D7FMR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR0_ECTSI)

HSP 1 Score: 542 bits (1396), Expect = 8.000e-188
Identity = 313/405 (77.28%), Postives = 334/405 (82.47%), Query Frame = 0

Query:   32 MDPFDPDAIIHVLSRCEACQLGQVGTRVCVEKGHHATVASVKRSARGSNFVDPYTEEEVDARYRLMLKPGESLRIIHTNAVIDGAVKFAPGTVFQQPPNTKSQTLLGCFKNGVPLQDFVLGG--AAGAXXXXXXXXXRELDMDDGRQVMCWCWFMCCNGNARRKAPVAPMVTVKKP--------AMTLSETASAQGLSGVNSHYFSRQQLEELEAEADGTTCPSSAAAPATVPTRRQGTRSCSVGSPSPAPASGNGASWDGAPSAAEGADSATQLELLAAAEGELRVAFDAHMKHLSELEEAKLAEMAAFQRAGEAALQNMDRSRKATTEDGLRLHKAFLTQRQRITRLRMQEVDQERARNQLESEKREARLKAEKEALSKACEQEAAEMGNKWAVVEAAAGFVP 426
            MDPFDPDAIIHVLSRCEACQ+GQVGTRVCVEKGHHATVASVKRSARGSNFVDPYTEEEVDARYRLMLKPGE L II TNAVIDGAVKFAPGTVFQQPPNTKSQTLLGCFKNGVPL DFVLGG  +   XXXXX    REL+MDD RQ          N  + +K PVAPMVTVKKP          TLSE A+ QGLSGV S YF+R +LEELEAE +GT  P           +RQGTRS SV   S A   GNGA WDG P+AA+GADSATQLELL+AAEGELRVAFDAHMK+LSE+EEAK AEMAAFQRAGEAALQNM+RSRKATT+DGLRLHKAFL QRQRITRLRM+EVDQERARNQ+ESEKREARLKAEKEALS+ACEQEAAE+GN WAVVEAAAGF P
Sbjct:    1 MDPFDPDAIIHVLSRCEACQMGQVGTRVCVEKGHHATVASVKRSARGSNFVDPYTEEEVDARYRLMLKPGEPLHIIKTNAVIDGAVKFAPGTVFQQPPNTKSQTLLGCFKNGVPLHDFVLGGNNSGAXXXXXXAKKERELEMDD-RQPKRRALSQGLNPGSAKKGPVAPMVTVKKPPTATTPTATATLSEKAAVQGLSGVTSQYFTRAELEELEAEEEGTGRPG----------KRQGTRSSSVAGQSHA---GNGAVWDGTPAAAQGADSATQLELLSAAEGELRVAFDAHMKYLSEVEEAKRAEMAAFQRAGEAALQNMERSRKATTDDGLRLHKAFLNQRQRITRLRMEEVDQERARNQVESEKREARLKAEKEALSRACEQEAAELGNAWAVVEAAAGFAP 391

[Close]

BLAST of mRNA_C-linearis_contig98.17119.1 vs. uniprot
Match: A0A6H5KY16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY16_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 4.830e-11
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 0

Query:  383 QLESEKREARLKAEKEALSKACEQEAAEMGNKWAVVEAAAGFVP 426
            Q+ESEKREARLKAEKEALS+ACEQE AE+GN WAVVEAAAGF P
Sbjct:    6 QVESEKREARLKAEKEALSRACEQEEAELGNAWAVVEAAAGFAP 49

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig98.17119.1 vs. uniprot

BLAST of mRNA_C-linearis_contig98.17119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FMR0_ECTSI	8.000e-188	77.28	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KY16_9PHAE	4.830e-11	86.36	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 367..410

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig98	contig	C-linearis_contig98:288207..297036 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig98.17119.1	mRNA_C-linearis_contig98.17119.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig98 288207..297036 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig98.17119.1 ID=prot_C-linearis_contig98.17119.1|Name=mRNA_C-linearis_contig98.17119.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=501bp
SGAWRGRKDGKTRREEGRQAHREAAENAAATMDPFDPDAIIHVLSRCEAC
QLGQVGTRVCVEKGHHATVASVKRSARGSNFVDPYTEEEVDARYRLMLKP
GESLRIIHTNAVIDGAVKFAPGTVFQQPPNTKSQTLLGCFKNGVPLQDFV
LGGAAGAAAAAAAKKERELDMDDGRQVMCWCWFMCCNGNARRKAPVAPMV
TVKKPAMTLSETASAQGLSGVNSHYFSRQQLEELEAEADGTTCPSSAAAP
ATVPTRRQGTRSCSVGSPSPAPASGNGASWDGAPSAAEGADSATQLELLA
AAEGELRVAFDAHMKHLSELEEAKLAEMAAFQRAGEAALQNMDRSRKATT
EDGLRLHKAFLTQRQRITRLRMQEVDQERARNQLESEKREARLKAEKEAL
SKACEQEAAEMGNKWAVVEAAAGFVPGEEGQGAGMTIENGHDGVGAGDGN
GNASSSSGVDSKIHHLVAAAGAGGGGGGVSCEGGENRLLPGIVGGDATGK
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