Homology
BLAST of mRNA_C-linearis_contig96.17043.1 vs. uniprot
Match:
A0A6H5JHT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT5_9PHAE)
HSP 1 Score: 167 bits (423), Expect = 7.150e-51
Identity = 92/137 (67.15%), Postives = 105/137 (76.64%), Query Frame = 0
Query: 1 MSGSSLWRERRAGVTVAVLCCIGAVAYVGAA--KWNSRRPTRRMLGNIASGRDFIDALSTGVAELEAKVSLAAEGTDLETAREEHERKSREYDEQVTQVLTHLDKCVGGGEIGVARKKQVHRAEALGVRISKILPGG 135
MSGS + GV AV+ + AVA A KW S RRMLGNIASGR+FID LS VA+LEA ++LAAE +DL+TAR+EHERKSRE+DE VTQVLTHLDKC GGGEI VARKKQ+HRAEALG+RIS ILPGG
Sbjct: 1 MSGSL---GQHTGVIAAVVFALVAVAATTAVARKWKSGGSKRRMLGNIASGREFIDTLSAEVADLEATIALAAEASDLDTARQEHERKSREHDESVTQVLTHLDKCTGGGEISVARKKQIHRAEALGLRISNILPGG 134
BLAST of mRNA_C-linearis_contig96.17043.1 vs. uniprot
Match:
D7G4A6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4A6_ECTSI)
HSP 1 Score: 167 bits (423), Expect = 7.150e-51
Identity = 88/128 (68.75%), Postives = 103/128 (80.47%), Query Frame = 0
Query: 13 GVTVAVLCCIGAVAYVGAA--KWNSRRPTRRMLGNIASGRDFIDALSTGVAELEAKVSLAAEGTDLETAREEHERKSREYDEQVTQVLTHLDKCVGGGEIGVARKKQVHRAEALGVRISKILPGGTAE 138
GV AV+C + AVA A KW S RRMLGNIASGR+F+DALS VA+LEA ++LAAE +DL+TAR+E+ERKSRE+DE VTQVLTHLDKC GG EIGVARKKQ+HRAE LG+RISKILPGG +
Sbjct: 10 GVIAAVVCGLVAVAGTTAVARKWKSGGTKRRMLGNIASGREFLDALSAEVADLEATIALAAEASDLDTARKENERKSREHDEHVTQVLTHLDKCTGGDEIGVARKKQIHRAEVLGLRISKILPGGPVD 137
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17043.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
M S G S S L W R E R R A G V T V A V L C C I G A V A Y V G A A K W N S R R P T R R M L G N I A S G R D F I D A L S T G V A E L E A K V S L A A E G T D L E T A R E E H E R K S R E Y D E Q V T Q V L T H L D K C V G G G E I G V A R K K Q V H R A E A L G V R I S K I L P G G T A E D * 20 40 60 80 100 120 140 Expect = 7.15e-51 / Id = 67.15 Expect = 7.15e-51 / Id = 68.75 Sequence A0A6H5JHT5_9PHAE D7G4A6_ECTSI
Match Name E-value Identity Description
A0A6H5JHT5_9PHAE 7.150e-51 67.15 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more] D7G4A6_ECTSI 7.150e-51 68.75 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M S G S S L W R E R R A G V T V A V L C C I G A V A Y V G A A K W N S R R P T R R M L G N I A S G R D F I D A L S T G V A E L E A K V S L A A E G T D L E T A R E E H E R K S R E Y D E Q V T Q V L T H L D K C V G G G E I G V A R K K Q V H R A E A L G V R I S K I L P G G T A E D * 20 40 60 80 100 120 140 Score = Score = Score = Score = Score = Expect = 3.1E-5 / Score = 25.9 Sequence Coil CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE TMhelix G3DSA:1.20.58.120
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 76..96 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 34..139 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..11 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 12..33 None No IPR available TMHMM TMhelix coord: 12..31 IPR036533 BAG domain superfamily GENE3D 1.20.58.120 coord: 31..130
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig96.17043.1 ID=prot_C-linearis_contig96.17043.1|Name=mRNA_C-linearis_contig96.17043.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=140bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR036533 BAG_dom_sf