Homology
BLAST of mRNA_C-linearis_contig96.17018.1 vs. uniprot
Match: A0A6H5JPW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPW3_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.570e-24 Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 0 Query: 1 RHDLEGLWIIYQAKLVDPLDLDRWVEIFETTVSNLLSTQPLQSLTKRARLGVVMSIVGSGRTHLHTPAVLAVLATDWSDEWASFKLLQ 88
R +LE L+ ++QAKL+ PLD RW + TTV++LLS QPLQ LTK RL V+M IVGSGR L +PAVLAVLA DW D++ SFKLLQ
Sbjct: 74 RQELEELFTVWQAKLLHPLDRSRWTNVLNTTVASLLSAQPLQCLTKSGRLAVMMCIVGSGRAGLFSPAVLAVLACDWVDDYGSFKLLQ 161
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig96.17018.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| A0A6H5JPW3_9PHAE | 1.570e-24 | 61.36 | Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | GENE3D | 2.30.30.140 | | coord: 305..359
e-value: 4.0E-5
score: 25.3 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig96.17018.1 ID=prot_C-linearis_contig96.17018.1|Name=mRNA_C-linearis_contig96.17018.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=603bp
RHDLEGLWIIYQAKLVDPLDLDRWVEIFETTVSNLLSTQPLQSLTKRARL
GVVMSIVGSGRTHLHTPAVLAVLATDWSDEWASFKLLQDTVRQASLSRLR
SKWDFNSSSEFDVPRKCMADLVFLGAKKTVASWRALGIGGSARDAVEKAG
RELRGLAARCRGASDRPAARKILTCYLASHRKGTLALFAKVVERFTQALI
AWGQQHLGASEPTIFDQAFPFLGLRQIQASRSRADARRVPVETQDPAYTK
RPPSPALCGPFFDAMGEADTQAETSRWEEGEGKEAGKSEGSRKRRKIGTL
LRLDESVIQKGAYGDPDLWRRGAIETCRGDGTYDVRYDDDGEVGHLVRRQ
DIFGPEESDVPTGMLTPHDTTSARCSPLKRLQTISWASADDVSSLLPCSP
DDLWCVTDVDDDSSGGGNYTRLIQRGKRKRRVLHDDECEEDDDDSTTGAS
DAATAARDSQGRQASLSKFSNDDGEISQSPLLCIDQARSKGAVGIRAGQE
RTANKKALGKQGGSCDGFRPGKTESDIAYRGELAHYDVGGGTEGVDGEDD
ETDEEVEASTWDTRGDRRQSQEEDSEADADGVGKDADNRADDGIRSSPPP
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