prot_C-linearis_contig95.16997.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig95.16997.1
Unique Nameprot_C-linearis_contig95.16997.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1370
Homology
BLAST of mRNA_C-linearis_contig95.16997.1 vs. uniprot
Match: D7G0V5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V5_ECTSI)

HSP 1 Score: 885 bits (2286), Expect = 2.290e-300
Identity = 640/1386 (46.18%), Postives = 738/1386 (53.25%), Query Frame = 0
Query:   27 MARLVDSLLRGRAQPSARNEAAAAVSDVRAFVRAWRPTPSSPSSSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSHSS--CPPAPNELSAGVLLKLAQRGVQLHNNIRKLPQFRDNGSGGSSGGGGQDWRSATVAYLRAAAASLVSLGSTSSPKDCANLCRLFSKAGELLMEDARDDIRALEMFEDAEKFFRRLPGSFYGAGPEGRDSRMPSLPAEDLVMAVHKASSRRVEVLSRTTGNVDQMVACYEQQLEVLALTMSNRSSPAGLGVSTAMHAASVGEERFKKGDCRGASRLLRYGTHSIGASWHARAVGGLALQALCRVDPLETGGSAKAPPAGHAVEMRRSLLFSLAHCCSKSGEHNHAIRCIEQLEVDGSRAVDGGGANTP-SFLFAKCKVLADAGELAGAFQAAESLVAATPADGVRAIETAGRCSGE-HDHLDLVTARMMCSLDDGSDRSLNLFASIVERFPGTPKAFDARVALLTGLAAAARLRSQGPGLGRRLDPDRGEKSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEIGPGADERAAAESAERAERTADAVVDVAEASKCKGLARTQVEAALEVLATFAEILQGLGDWEACARWCGRAIALAKGLSNRPAAPAEPAPASSSALFVASGFAGXXXXXXXXXXXXXXSTASGRGGGVVLLLASLLTLRGEMECRMGDFASSSRTLDQALAERPTYERAREVAFWSAACDPGRDESSLSARLSALTGPRSGLAAGAARQGFLAKCVGLVVGATTTSAXXXXXXXXXXXTEDEPERMNTGAATPGARMPPAAGPDDDPNHDTRVTMVQERLLEALLLSPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSCETADDEA--------VAEGSG--------------------------------AAPTAVQVLASMVDSALQSTKRE----HGGGQEARVALTLSRVLLSIDKALLSAALLGISPSDDPDLEYLSKGCWNLAVRCCGSACDLPRADGKGCSARKNRAGNVSGTGTFTEGRRNPLLVLVPAFFKASRNWAELRSDANVAEALLTRQNCMVLTISATLEIYDD--AKSAEKTGPGSSSSEENGPPERLDMLERARKEVEVATGLNRELSSVNPEVAAEMRSILLVAEMSVLGRLRDAVAVRSLVASREPDFLRCSTTLLQYCVQLAEDMLDDAKSIAGLCRLCIRRCLEDDPVDTPALGGLYRRLLVSASSREEALLVVDDFMARARDLQEGTAGIPSDDVDYMAAKCYNLGLNLMDMGLAGEAERFVGKALGLVKLGSSRAFATRWEETIYQVYRTSLQLKGGHERPS----AAGCGSXXXXXISTGLRSEGFGRARGLLSTGLFPIP 1358
            MARLVDSLLRGRAQ SAR+EAA AVSD+RAFV AWRP   +P+S +                                 SH S    P+ N  SA  LLKLAQ                                                                                 ALEMFEDAE +F RLPGSFY  G   +   MPSL AEDL+MAVHKASSRR+EVLSRTTGNVDQMV  YE QL++L        SPAGL +STA+HAASVGEERFKKGDCRGASR+LR                 LALQA+          +A  P A H  ++RR++LFSLAHCCSKSG+HN+AI+ I+ LE  G     GGG + P  FLFAKCKVL DAG+L GA+ AA++LVA TPA   +   TAG   GE  D LDL  AR++ S DD SDRSL+LFA+I  RF GTPKA DARVALL+GLA AARLRS+G G G      + EK                                        G  A   A  E+  RAE+TAD ++  AE S C  +A  QV++ALEVL TF E  QG   WE+CARWCGRAI LA G S        P    +S                                   LLLASLLTLRGEMECR GDFASSS+TLDQALA  PTY RAREVAFWSAA DP RDESSLSARLSAL+GPR+ L  GA R+ +LA CVGLV G                 T+D  +R  + A               +  +D+RVTMVQERLLEALL+  PA                                  +    A ++         V EG G                                  PTAVQV+ASMVDSALQ   +E    H G  E   A  LSRVLLS+DK L  A  LGI P DDPD+ YLS GCWNLAVRCCGS CDLP  D  G SA K++      T   TE +RN LLVL PAFFKASRNWAE+ SDAN+ +ALL RQNC+VL+I+ATLE+YD      A      +SSSE      R DMLER+RKEVEVATGLNR LS V P++A EMRSILLVAEMSVLGRL D VAVRSLVASREPDFLRCST LLQYC+Q                                                +EALLVVD+F A++RDLQEG  G+PS+DVDY++AKCYNLGL L++M   GEAERFVGKALGL+KLGSS AF  RWEE I++VYRT+LQ KG     +    A G GS      ST +    F      LSTGLFP+P
Sbjct:    1 MARLVDSLLRGRAQASARHEAATAVSDIRAFVHAWRP--DAPASKDEQDSTEPEGRGRTR-------------------SHGSGGSDPSMNRPSADTLLKLAQ---------------------------------------------------------------------------------ALEMFEDAEGYFSRLPGSFYATG--WQKFGMPSLSAEDLIMAVHKASSRRIEVLSRTTGNVDQMVEGYEWQLKILTAR-----SPAGLRMSTAVHAASVGEERFKKGDCRGASRILR-----------------LALQAIGGDVGSGPTATASDPQAAHTGKLRRTILFSLAHCCSKSGDHNNAIKFIKHLEEGGGWCAKGGGTDPPPKFLFAKCKVLTDAGDLTGAYTAAKALVALTPAPSGK--PTAGVGDGEPEDGLDLAAARLISSRDDCSDRSLDLFAAIASRFAGTPKAVDARVALLSGLAMAARLRSEGGGAGWWSPDGQHEK----------------------------------------GSAAAATAENEAVGRAEKTADDMI--AEISGCNNVATYQVDSALEVLVTFTEFFQGRDKWESCARWCGRAINLATGDSKGSTPKRVPHADKAS-----------------------------------LLLASLLTLRGEMECRTGDFASSSQTLDQALALCPTYGRAREVAFWSAARDPNRDESSLSARLSALSGPRARLTPGARRE-YLATCVGLVAGVRKA-------------TQDPDQRGESDAG--------------NARYDSRVTMVQERLLEALLVEAPATTDMEKEAEPTQAQPSTSSTPHEAGSDKDGPAGSAPVGGAGEDCGGIAPTPMVVEGEGDEDVGDVPVARTGADATPPGNRSAGSNGNGTDPVPTAVQVVASMVDSALQWVSKEEIKVHRGSAE-DAASVLSRVLLSVDKTLRRAGSLGIGPLDDPDIRYLSHGCWNLAVRCCGSNCDLPWGDKVGSSASKDQMSVDEAT--HTERKRNDLLVLAPAFFKASRNWAEIGSDANMEDALLRRQNCVVLSIAATLELYDSKPVDGAPLANATTSSSE------RRDMLERSRKEVEVATGLNRLLSDVKPDMATEMRSILLVAEMSVLGRLGDFVAVRSLVASREPDFLRCSTNLLQYCLQ------------------------------------------------DEALLVVDEFTAKSRDLQEGP-GMPSEDVDYVSAKCYNLGLQLLEMSRPGEAERFVGKALGLLKLGSSPAFVRRWEEAIHKVYRTTLQAKGDAATATNPIMAGGSGSQ----ASTAIGGRAF------LSTGLFPMP 1085          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0V5_ECTSI2.290e-30046.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 20..543
NoneNo IPR availablePANTHERPTHR23202:SF27VERPROLIN 1, ISOFORM Gcoord: 762..1365
coord: 20..543
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 762..1365
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 293..837
NoneNo IPR availablePANTHERPTHR23202:SF27VERPROLIN 1, ISOFORM Gcoord: 293..837
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 620..746

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig95contigC-linearis_contig95:443881..462451 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig95.16997.1mRNA_C-linearis_contig95.16997.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig95 443303..462520 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig95.16997.1 ID=prot_C-linearis_contig95.16997.1|Name=mRNA_C-linearis_contig95.16997.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1370bp
MSVMDGEVTGSGSFPTVEQVNERATSMARLVDSLLRGRAQPSARNEAAAA
VSDVRAFVRAWRPTPSSPSSSEAAAAGTSGGPDSHQDGAANGGSAGGEGQ
GEGQSSHSSCPPAPNELSAGVLLKLAQRGVQLHNNIRKLPQFRDNGSGGS
SGGGGQDWRSATVAYLRAAAASLVSLGSTSSPKDCANLCRLFSKAGELLM
EDARDDIRALEMFEDAEKFFRRLPGSFYGAGPEGRDSRMPSLPAEDLVMA
VHKASSRRVEVLSRTTGNVDQMVACYEQQLEVLALTMSNRSSPAGLGVST
AMHAASVGEERFKKGDCRGASRLLRYGTHSIGASWHARAVGGLALQALCR
VDPLETGGSAKAPPAGHAVEMRRSLLFSLAHCCSKSGEHNHAIRCIEQLE
VDGSRAVDGGGANTPSFLFAKCKVLADAGELAGAFQAAESLVAATPADGV
RAIETAGRCSGEHDHLDLVTARMMCSLDDGSDRSLNLFASIVERFPGTPK
AFDARVALLTGLAAAARLRSQGPGLGRRLDPDRGEKSPPPPPPPGTGEPV
PHEGVRTRTSTSDAALGFGFGFGSEIGPGADERAAAESAERAERTADAVV
DVAEASKCKGLARTQVEAALEVLATFAEILQGLGDWEACARWCGRAIALA
KGLSNRPAAPAEPAPASSSALFVASGFAGSGGGRGGGGVGGNGSTASGRG
GGVVLLLASLLTLRGEMECRMGDFASSSRTLDQALAERPTYERAREVAFW
SAACDPGRDESSLSARLSALTGPRSGLAAGAARQGFLAKCVGLVVGATTT
SAGGGGGRGRGRRTEDEPERMNTGAATPGARMPPAAGPDDDPNHDTRVTM
VQERLLEALLLSPPAPAAATATGEDDRGRTAPVPMDVGVGVDAGGQGAGS
SCETADDEAVAEGSGAAPTAVQVLASMVDSALQSTKREHGGGQEARVALT
LSRVLLSIDKALLSAALLGISPSDDPDLEYLSKGCWNLAVRCCGSACDLP
RADGKGCSARKNRAGNVSGTGTFTEGRRNPLLVLVPAFFKASRNWAELRS
DANVAEALLTRQNCMVLTISATLEIYDDAKSAEKTGPGSSSSEENGPPER
LDMLERARKEVEVATGLNRELSSVNPEVAAEMRSILLVAEMSVLGRLRDA
VAVRSLVASREPDFLRCSTTLLQYCVQLAEDMLDDAKSIAGLCRLCIRRC
LEDDPVDTPALGGLYRRLLVSASSREEALLVVDDFMARARDLQEGTAGIP
SDDVDYMAAKCYNLGLNLMDMGLAGEAERFVGKALGLVKLGSSRAFATRW
EETIYQVYRTSLQLKGGHERPSAAGCGSGSGSGISTGLRSEGFGRARGLL
STGLFPIPAGAAAAAGQAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf