Homology
BLAST of mRNA_C-linearis_contig95.16996.1 vs. uniprot
Match:
D7G7N3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7N3_ECTSI)
HSP 1 Score: 270 bits (691), Expect = 1.610e-83
Identity = 223/398 (56.03%), Postives = 247/398 (62.06%), Query Frame = 0
Query: 84 MCEVYERLSGVCVQMHVDESRGEIRFSPVAEIGSNSGSSXXXXXXXXXXXXXXXXXXXXVSSADQXXXXXXXXXXXXXXXXXXARYGCDPRNAWSPWSYAVVTVEGRTVLDVVPPEVTFGETLVTVRSDLDPFLHVEALTYVPANGEAASA---------GGGGVPVLPSEAXXXXXXXXXXHFLTFGLSSWNCAVVGSAFLLVGLLLLLQPVLXXXXXXXXXXXXXXXXXXXXXXXXX---------GRLRGRQWRYGQLETDWAGGSDFSDGGVYDAPEDDXXXXXXXXXXXXXXXXWGSEGGWHGEGAQTGVEMPASPAERDQLTARIPGRLSGGSASRFAEDSLRRRG-DGGALXXXXXN----------RDDGVGGIQMGPMGRSLGGESALV 452
MCEVYERLS VCVQ+HVD++ GEI F+PVAEIGS SS XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX ARYGCDPRNAWSPW YAVVTVEGRTVLDVVPP +TF +TLVT RSDLDPFLHVEALTY P++G G G + P + FLTFGLSSWN AVVGSAFL+VGLLLL+QPVL XXXXX G+LRG QWRYGQLETDW GS+F DGGVY+ +DD WGSEG W GE +GV P SP+E + A RL RF +DSLRRR DGGAL XXX R D GGIQ+GPMG+S GE+ L+
Sbjct: 1 MCEVYERLSTVCVQVHVDDNNGEISFAPVAEIGSGDSSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXET---ARYGCDPRNAWSPWGYAVVTVEGRTVLDVVPPTITFSKTLVTTRSDLDPFLHVEALTYDPSSGGIGGGXXXXXXXAEGASGEGISPEGSVGGGGGG---QFLTFGLSSWNSAVVGSAFLVVGLLLLVQPVLALKAWWREGGVGSDEGGPTGXXXXXXXXXRSGRGGKLRG-QWRYGQLETDWDDGSEFVDGGVYEGEDDDDDG-------------WGSEGDWQGE-TSSGVGRPPSPSEGNHFQASATPRLG----RRFMQDSLRRRAADGGALGTXXXXXXXXXXXXXIRGD-AGGIQLGPMGKSGRGEANLI 372
BLAST of mRNA_C-linearis_contig95.16996.1 vs. uniprot
Match:
A0A835YNJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNJ9_9STRA)
HSP 1 Score: 88.2 bits (217), Expect = 1.560e-15
Identity = 63/238 (26.47%), Postives = 94/238 (39.50%), Query Frame = 0
Query: 37 RKSNPILAEMETEWTPLTRIREEHAPMPAPETKCMQVFGGVHNYKTKMCEVYERLSGVCVQMHVDESRGEIRFSPVAEIGSNSGSSXXXXXXXXXXXXXXXXXXXXVSSADQXXXXXXXXXXXXXXXXXXARYGCDPRNAWSPWSYAVVTVEGRTVLDVVPPEVTFGETLVTVRSDLDPFLHVEALTYVPANGEAASAGGGGVPVLPSEAXXXXXXXXXXHFLTFGLSSWNCAVVGSA 274
+KS + + T + PLT R AP PAPETKCM GV ++ ++ C Y+ L+ +CVQ+ + G +P+ +SG YGC AWSP +YA + +EG + DV P V +TVRS+LDP+LH + +T+ +TFGLSS +C +VG++
Sbjct: 95 KKSTTARSALATVYFPLTTTRRARAPQPAPETKCMVQQHGVLDHASQECVSYQALTSLCVQVRLSPG-GAASLAPMVRARKSSG---------------------------------------------VPSYGCSAAAAWSPVAYAPLPLEGHSTDDVAVPPVNLTALTITVRSELDPYLHAQVITH--------------------------------DSMTFGLSSRSCLIVGAS 254
BLAST of mRNA_C-linearis_contig95.16996.1 vs. uniprot
Match:
A0A6H5JGC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC6_9PHAE)
HSP 1 Score: 71.2 bits (173), Expect = 1.220e-9
Identity = 34/45 (75.56%), Postives = 36/45 (80.00%), Query Frame = 0
Query: 29 RNETKGAGRKSNPILAEMETEWTPLTRIREEHAPMPAPETKCMQV 73
R K A + P+LAEM TEWTPLTRIREEHAPMPAPETKCMQV
Sbjct: 418 RRRMKKAPAAAAPVLAEMVTEWTPLTRIREEHAPMPAPETKCMQV 462
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16996.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 3
G G G G R E R E R E R E M R G R R L L P I R R W R R R R R N E T K G A G R K S N P I L A E M E T E W T P L T R I R E E H A P M P A P E T K C M Q V F G G V H N Y K T K M C E V Y E R L S G V C V Q M H V D E S R G E I R F S P V A E I G S N S G S S N G S S S S S G S S G S S I S G G S G G V S S A D Q D Q E R L E E E E E E E A E A A A A A R Y G C D P R N A W S P W S Y A V V T V E G R T V L D V V P P E V T F G E T L V T V R S D L D P F L H V E A L T Y V P A N G E A A S A G G G G V P V L P S E A G E G G G G G G G G H F L T F G L S S W N C A V V G S A F L L V G L L L L L Q P V L A L R K W W R E T G G A P P P R P P D G G G A G G G R L R G R Q W R Y G Q L E T D W A G G S D F S D G G V Y D A P E D D D E D E D D D D D D D D D G D G W G S E G G W H G E G A Q T G V E M P A S P A E R D Q L T A R I P G R L S G G S A S R F A E D S L R R R G D G G A L G G G G G N R D D G V G G I Q M G P M G R S L G G E S A L V * 50 100 150 200 250 300 350 400 450 Expect = 1.61e-83 / Id = 56.03 Expect = 1.56e-15 / Id = 26.47 Expect = 1.22e-9 / Id = 75.56 Sequence D7G7N3_ECTSI A0A835YNJ9_9STRA A0A6H5JGC6_9PHAE back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
G G G G R E R E R E R E M R G R R L L P I R R W R R R R R N E T K G A G R K S N P I L A E M E T E W T P L T R I R E E H A P M P A P E T K C M Q V F G G V H N Y K T K M C E V Y E R L S G V C V Q M H V D E S R G E I R F S P V A E I G S N S G S S N G S S S S S G S S G S S I S G G S G G V S S A D Q D Q E R L E E E E E E E A E A A A A A R Y G C D P R N A W S P W S Y A V V T V E G R T V L D V V P P E V T F G E T L V T V R S D L D P F L H V E A L T Y V P A N G E A A S A G G G G V P V L P S E A G E G G G G G G G G H F L T F G L S S W N C A V V G S A F L L V G L L L L L Q P V L A L R K W W R E T G G A P P P R P P D G G G A G G G R L R G R Q W R Y G Q L E T D W A G G S D F S D G G V Y D A P E D D D E D E D D D D D D D D D G D G W G S E G G W H G E G A Q T G V E M P A S P A E R D Q L T A R I P G R L S G G S A S R F A E D S L R R R G D G G A L G G G G G N R D D G V G G I Q M G P M G R S L G G E S A L V * 50 100 150 200 250 300 350 400 450 Score = Score = Score = Score = Score = Sequence Coil TRANSMEMBRANE CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 143..166 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 269..290 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 291..452 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..268 None No IPR available TMHMM TMhelix coord: 262..284
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig95.16996.1 ID=prot_C-linearis_contig95.16996.1|Name=mRNA_C-linearis_contig95.16996.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=453bp back to top