Homology
BLAST of mRNA_C-linearis_contig95.16995.1 vs. uniprot
Match: A0A6H5JGC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC6_9PHAE) HSP 1 Score: 210 bits (535), Expect = 2.880e-62 Identity = 105/142 (73.94%), Postives = 119/142 (83.80%), Query Frame = 0 Query: 3 PRPQYDDEDGPPVGVSFLLVVLGAVALCIAAVYLRASTLHEREIRISAFEATISAWNTSRPMFARLSVNVTAHFGVAPPNTTSPGLDPNPPVPAPPLPLTVSENPDPIYDEEGASGGLPNYEPLKLDRGIAPLPWRTAPRFP 144
PR +Y++E GPP VSFLL++LG ALCIAAVYLRASTLH+REI+ISA+E TIS W RP FARLS+NVTAHFGVAP NTTSPGLDPNPP P PL L VSE+ DPI+DEEG +GGLPNY PLKL+RG+AP PWRTA RFP
Sbjct: 32 PRARYENE-GPPAAVSFLLIILGIAALCIAAVYLRASTLHDREIKISAYEETISEWTAFRPTFARLSINVTAHFGVAPVNTTSPGLDPNPPPPGTPLALAVSEDADPIHDEEGDAGGLPNYVPLKLERGVAPPPWRTARRFP 172
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16995.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| A0A6H5JGC6_9PHAE | 2.880e-62 | 73.94 | Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..14 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 15..36 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 37..233 |
| None | No IPR available | TMHMM | TMhelix | | coord: 15..37 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig95.16995.1 ID=prot_C-linearis_contig95.16995.1|Name=mRNA_C-linearis_contig95.16995.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=233bp
MQPRPQYDDEDGPPVGVSFLLVVLGAVALCIAAVYLRASTLHEREIRISA
FEATISAWNTSRPMFARLSVNVTAHFGVAPPNTTSPGLDPNPPVPAPPLP
LTVSENPDPIYDEEGASGGLPNYEPLKLDRGIAPLPWRTAPRFPPPEEED
SEEEDDEEEAGDAVGSSAEERQEEGEGEGQETPDSVGTGAGADGGGRRRR
QRRRRILEDGRWTGAALPAHNAGAGAAVAAAAA back to top
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