prot_C-linearis_contig95.16991.1 (polypeptide) Chordaria linearis ClinC8C monoicous
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_C-linearis_contig95.16991.1 vs. uniprot
Match: A0A6H5LAM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAM6_9PHAE) HSP 1 Score: 142 bits (358), Expect = 1.360e-32 Identity = 92/196 (46.94%), Postives = 113/196 (57.65%), Query Frame = 0 Query: 1 MSQRLGDGKWVDVNGDNIGIQVYPRASPGKSRGTASPSSSTGGSGVFISISAETVKRSSKVLVAKRSLQLDVSFSECPSLARLAHVPLGEVPEGGRCTLILQLGGGARVFSRFRKAIAALVSATPP---------GGVATETSRVVIEKSRFQDFD---------------------TNAKTRPRTTACGLASSKS 166 + RLG+ +D+ GD+I IQVYP+ASPGKS GT STGG GVFISI AETV +SKVLV RSLQ+DVS SECP+LARL P E CT+I+QL GG+++F+RFR+AIAAL S P G +T+ S + F+ D TN + RPR ACGLASS S Sbjct: 219 LRDRLGEAHHLDIGGDSISIQVYPKASPGKSSGT-----STGGGGVFISIPAETVAAASKVLVGARSLQVDVSLSECPALARLVRTPPEENAATANCTVIIQLEGGSQMFNRFRQAIAALKSKVPDVANEAKPSTGSKSTKGSLALEHAEVFKPSDEVEGAEGVEGNLGDDDEEESQTNHRKRPR-AACGLASSVS 408
BLAST of mRNA_C-linearis_contig95.16991.1 vs. uniprot
Match: D7G7N8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N8_ECTSI) HSP 1 Score: 143 bits (360), Expect = 4.460e-31 Identity = 141/429 (32.87%), Postives = 175/429 (40.79%), Query Frame = 0 Query: 1 MSQRLGDGKWVDVNGDNIGIQVYPRASPGKSRGTASPSSSTGGSGVFISISAETVKRSSKVLVAKRSLQLDVSFSECPSLARLAHVPLGEVPEGGRCTLILQLGGGARVFSRFRKAIAALVSATPP---------GGVATETSRVVIEKSRFQDFD---------------------TNAKTRPRTTACGLASSKS----IPPTSXXXXXXXXXXPLDHXXXXXXXXXXSARRVPSSAKKVTTDSDTDDLSPATAVKTGVRGGGASAQ-------ELP---AGSFRRIAQGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWEDSWMAPQRCLDLAPVPVAGEKXXXXXXXXXXXXXXXXXXXXRKARPSREKNDHVHRRAAKGRDAGGTAKQGLDLDKKTEWDPSGSD 385 + RLG+ +D+ GD+I IQVYP+ASPGK+ GT STGG GVFISI AETV +SKVLV RSLQ+DVS SECP+LARL P E CT+I+QL GG+++FSRFR+AIAAL S P G +T+ S + F+ D TN + RPR CGLA S S I P A+R + TDS + A V T + E+P AGSFRRIAQG+ DSWMAP+R LDLAP ++ R SR ++ RAAKG D G + + G TEWD S D Sbjct: 199 LRDRLGEAHHLDIGGDSISIQVYPKASPGKTSGT-----STGGGGVFISIPAETVAAASKVLVGARSLQVDVSLSECPALARLVRTPPEENAATANCTIIIQLEGGSQMFSRFRQAIAALKSKVPDVAKEAKPSRGSKSTKGSSALEHAEVFKPSDELEGAEGVEEDLDDDDEEGTQTNHRKRPR-AVCGLAGSVSNRSRITPRKDGRRDSDRGGEDQTASREKASSGRKAKRAHRAPLNTPTDSPVSAPAAAARVNTSTASSAEKKRITDHAKGEVPTPAAGSFRRIAQGAAVTAHDSSLQARESSEGSSRSFSDDADATAARDDDGG--------------DSWMAPRRHLDLAPASATAKRKDKQA---------------RTKTGSRNRDGSGKVRAAKG-DGGSSLRGG-----STEWDISEDD 586 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16991.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig95.16991.1 ID=prot_C-linearis_contig95.16991.1|Name=mRNA_C-linearis_contig95.16991.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=889bpback to top |