Homology
BLAST of mRNA_C-linearis_contig95.16980.1 vs. uniprot
Match:
A0A6H5KRN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRN9_9PHAE)
HSP 1 Score: 124 bits (312), Expect = 2.540e-29
Identity = 67/143 (46.85%), Postives = 87/143 (60.84%), Query Frame = 0
Query: 1 EQRRVGVTIEQARPMLTPVPLPLIRYMRQSASRLGTAKARVERSRDIALFGTAFHTAQRGFDLSCALAAQVLSLPGGKGLIFNFHFGKTLRDSSLAIVARRDRACHELCPVRAVQVFAIVANSMGWQLREGYMFPKFEAGGSR 143
EQ+RVGV + QA ML V + L+R MR A + R+E +RD+ALF AF +RG DLS + +QVL LP G+GLIFNF FGKTLRDS A+V D AC +C V V + A +GW L +G++FP G+R
Sbjct: 815 EQKRVGVAVNQAEAMLPHVLIDLLRDMRSRAQTASSLAERIELTRDVALFSLAFAPMRRGHDLSFTMGSQVLQLPAGQGLIFNFQFGKTLRDSVDAVVVSPDVACPSICAVSNVTGYISAAERIGWDLSQGHLFPVVLLDGTR 957
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16980.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
E Q R R V G V T I E Q A R P M L T P V P L P L I R Y M R Q S A S R L G T A K A R V E R S R D I A L F G T A F H T A Q R G F D L S C A L A A Q V L S L P G G K G L I F N F H F G K T L R D S S L A I V A R R D R A C H E L C P V R A V Q V F A I V A N S M G W Q L R E G Y M F P K F E A G G S R S R S P W N P K D M A L A L Q S N V A A A G L E E G R K Y S M H Y F R I G G A V S Q A F T G T A V D A P M G L V G W K T R G V A Q R Y V 20 40 60 80 100 120 140 160 180 200 Expect = 2.54e-29 / Id = 46.85 Sequence A0A6H5KRN9_9PHAE
Match Name E-value Identity Description
A0A6H5KRN9_9PHAE 2.540e-29 46.85 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
E Q R R V G V T I E Q A R P M L T P V P L P L I R Y M R Q S A S R L G T A K A R V E R S R D I A L F G T A F H T A Q R G F D L S C A L A A Q V L S L P G G K G L I F N F H F G K T L R D S S L A I V A R R D R A C H E L C P V R A V Q V F A I V A N S M G W Q L R E G Y M F P K F E A G G S R S R S P W N P K D M A L A L Q S N V A A A G L E E G R K Y S M H Y F R I G G A V S Q A F T G T A V D A P M G L V G W K T R G V A Q R Y V 20 40 60 80 100 120 140 160 180 200 Expect = 3.5E-10 / Score = 42.0 Score = Sequence G3DSA:1.10.443.10 SSF56349
IPR Term IPR Description Source Source Term Source Description Alignment
IPR013762 Integrase-like, catalytic domain superfamily GENE3D 1.10.443.10 coord: 23..211 IPR011010 DNA breaking-rejoining enzyme, catalytic core SUPERFAMILY 56349 DNA breaking-rejoining enzymes coord: 40..211
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig95.16980.1 ID=prot_C-linearis_contig95.16980.1|Name=mRNA_C-linearis_contig95.16980.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=211bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR013762 Integrase-like_cat_sf IPR011010 DNA_brk_join_enz