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Homology
BLAST of mRNA_C-linearis_contig95.16978.1 vs. uniprot
Match: A0A6H5JUA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUA4_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 3.490e-9 Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0 Query: 13 SFWQDLAGGTVGGVIGMTVVYPLDTVKCRLQTTG 46
S WQ+LAGGT GGVIGMTVVYPLDT+K RLQT+G
Sbjct: 3 SLWQELAGGTAGGVIGMTVVYPLDTIKSRLQTSG 36
BLAST of mRNA_C-linearis_contig95.16978.1 vs. uniprot
Match: A0A6H5K323_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K323_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 4.070e-8 Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 0 Query: 13 SFWQDLAGGTVGGVIGMTVVYPLDTVKCRLQTTGDVLVSRPHVSAGGIRDDV 64
+ WQDL GGTVGGVIG+T V PLDTVK RLQT G L + +S+ + + V
Sbjct: 3 TLWQDLTGGTVGGVIGVTAVCPLDTVKSRLQTGGRYLGTVQVLSSMAVHEGV 54
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16978.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR018108 | Mitochondrial substrate/solute carrier | PFAM | PF00153 | Mito_carr | coord: 13..49
e-value: 7.5E-9
score: 35.4 |
| IPR023395 | Mitochondrial carrier domain superfamily | GENE3D | 1.50.40.10 | | coord: 2..75
e-value: 2.5E-7
score: 31.6 |
| IPR023395 | Mitochondrial carrier domain superfamily | SUPERFAMILY | 103506 | Mitochondrial carrier | coord: 13..64 |
| None | No IPR available | TMHMM | TMhelix | | coord: 13..35 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig95.16978.1 ID=prot_C-linearis_contig95.16978.1|Name=mRNA_C-linearis_contig95.16978.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=108bp
MEDGREEEAMGASFWQDLAGGTVGGVIGMTVVYPLDTVKCRLQTTGDVLV
SRPHVSAGGIRDDVCRCLRLLRLRQPFPAKVRSLWPKCFFRFPQGRPGGL
VDKPHTF* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR018108 | Mitochondrial_sb/sol_carrier |
| IPR023395 | Mt_carrier_dom_sf |
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