prot_C-linearis_contig95.16961.1 (polypeptide) Chordaria linearis ClinC8C monoicous
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_C-linearis_contig95.16961.1 vs. uniprot
Match: A0A6H5J769_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J769_9PHAE) HSP 1 Score: 112 bits (280), Expect = 1.220e-27 Identity = 57/80 (71.25%), Postives = 68/80 (85.00%), Query Frame = 0 Query: 49 SLSGKVAKLTRSLYGLKQASGTWHDHLVGGVKALGFEQRGADPGVVRLIENGVVSMVVVIDVDDIFSIGAEARCDQFGRD 128 +LSGKV +L+RSLYGLKQAS TWH HL+ G+K+LGFE AD V+RLIE+GVV+MVVVI VDDIFSIG ++RCDQFG D Sbjct: 23 ALSGKVVRLSRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVD 102
BLAST of mRNA_C-linearis_contig95.16961.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE) HSP 1 Score: 115 bits (287), Expect = 5.240e-27 Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 0 Query: 49 SLSGKVAKLTRSLYGLKQASGTWHDHLVGGVKALGFEQRGADPGVVRLIENGVVSMVVVIDVDDIFSIGAEARCDQFGRD 128 +LSGK+ +L RSLYGLKQAS TWH HLV G+K LGFEQ AD V+RLIE GVV+MVVV+ VDDIFSIG ++RC+QFGRD Sbjct: 739 ALSGKIVRLRRSLYGLKQASRTWHKHLVRGMKCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFGRD 818
BLAST of mRNA_C-linearis_contig95.16961.1 vs. uniprot
Match: A0A6H5K5L3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L3_9PHAE) HSP 1 Score: 111 bits (278), Expect = 6.260e-26 Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 0 Query: 49 SLSGKVAKLTRSLYGLKQASGTWHDHLVGGVKALGFEQRGADPGVVRLIENGVVSMVVVIDVDDIFSIGAEARCDQFGRD 128 +LSGKV +L RSLYGLKQAS TWH HL+ G+K+LGFE AD V+RLIE+GVV+MVVVI VDDIFSIG ++RCDQFG D Sbjct: 188 ALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVD 267
BLAST of mRNA_C-linearis_contig95.16961.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE) HSP 1 Score: 111 bits (278), Expect = 6.540e-26 Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 0 Query: 49 SLSGKVAKLTRSLYGLKQASGTWHDHLVGGVKALGFEQRGADPGVVRLIENGVVSMVVVIDVDDIFSIGAEARCDQFGRD 128 +LSGKV +L RSLYGLKQAS TWH HL+ G+K+LGFE AD V+RLIE+GVV+MVVVI VDDIFSIG ++RCDQFG D Sbjct: 201 ALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVD 280
BLAST of mRNA_C-linearis_contig95.16961.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE) HSP 1 Score: 111 bits (278), Expect = 8.260e-26 Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 0 Query: 49 SLSGKVAKLTRSLYGLKQASGTWHDHLVGGVKALGFEQRGADPGVVRLIENGVVSMVVVIDVDDIFSIGAEARCDQFGRD 128 +LSGKV +L RSLYGLKQAS TWH HL+ G+K+LGFE AD V+RLIE+GVV+MVVVI VDDIFSIG ++RCDQFG D Sbjct: 425 ALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVD 504
BLAST of mRNA_C-linearis_contig95.16961.1 vs. uniprot
Match: A0A6H5JMP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP2_9PHAE) HSP 1 Score: 111 bits (278), Expect = 8.530e-26 Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 0 Query: 49 SLSGKVAKLTRSLYGLKQASGTWHDHLVGGVKALGFEQRGADPGVVRLIENGVVSMVVVIDVDDIFSIGAEARCDQFGRD 128 +LSGKV +L RSLYGLKQAS TWH HL+ G+K+LGFE AD V+RLIE+GVV+MVVVI VDDIFSIG ++RCDQFG D Sbjct: 706 ALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVD 785
BLAST of mRNA_C-linearis_contig95.16961.1 vs. uniprot
Match: A0A6H5KBJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBJ6_9PHAE) HSP 1 Score: 111 bits (278), Expect = 8.730e-26 Identity = 57/80 (71.25%), Postives = 67/80 (83.75%), Query Frame = 0 Query: 49 SLSGKVAKLTRSLYGLKQASGTWHDHLVGGVKALGFEQRGADPGVVRLIENGVVSMVVVIDVDDIFSIGAEARCDQFGRD 128 +LSGKV +L RSLYGLKQAS TWH HL+ G+K+LGFE AD V+RLIE+GVV+MVVVI VDDIFSIG ++RCDQFG D Sbjct: 1382 ALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVD 1461
BLAST of mRNA_C-linearis_contig95.16961.1 vs. uniprot
Match: A0A6H5JEP3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEP3_9PHAE) HSP 1 Score: 111 bits (277), Expect = 1.140e-25 Identity = 57/80 (71.25%), Postives = 66/80 (82.50%), Query Frame = 0 Query: 49 SLSGKVAKLTRSLYGLKQASGTWHDHLVGGVKALGFEQRGADPGVVRLIENGVVSMVVVIDVDDIFSIGAEARCDQFGRD 128 +LSGKV +L RSLYGLKQAS TWH HL+ G+K+LGFE AD V+RLIE+GVV+MVVVI VDDIFSIG +RCDQFG D Sbjct: 644 ALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLNSRCDQFGVD 723
BLAST of mRNA_C-linearis_contig95.16961.1 vs. uniprot
Match: A0A6H5K0K7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K7_9PHAE) HSP 1 Score: 110 bits (276), Expect = 1.520e-25 Identity = 56/78 (71.79%), Postives = 66/78 (84.62%), Query Frame = 0 Query: 49 SLSGKVAKLTRSLYGLKQASGTWHDHLVGGVKALGFEQRGADPGVVRLIENGVVSMVVVIDVDDIFSIGAEARCDQFG 126 +LSGKV +L RSLYGLKQAS TWH HL+ G+K+LGFE AD V+RLIE+GVV+MVVVI VDDIFSIG ++RCDQFG Sbjct: 438 ALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFG 515
BLAST of mRNA_C-linearis_contig95.16961.1 vs. uniprot
Match: A0A6H5JV09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV09_9PHAE) HSP 1 Score: 110 bits (274), Expect = 2.940e-25 Identity = 56/80 (70.00%), Postives = 66/80 (82.50%), Query Frame = 0 Query: 49 SLSGKVAKLTRSLYGLKQASGTWHDHLVGGVKALGFEQRGADPGVVRLIENGVVSMVVVIDVDDIFSIGAEARCDQFGRD 128 +LSGKV +L R LYGLKQAS TWH HL+ G+K+LGFE AD V+RLIE+GVV+MVVVI VDDIFSIG ++RCDQFG D Sbjct: 915 ALSGKVVRLRRGLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGLKSRCDQFGVD 994 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig95.16961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig95.16961.1 ID=prot_C-linearis_contig95.16961.1|Name=mRNA_C-linearis_contig95.16961.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=141bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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