prot_C-linearis_contig92.16890.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig92.16890.1
Unique Name	prot_C-linearis_contig92.16890.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	104

Homology

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BLAST of mRNA_C-linearis_contig92.16890.1 vs. uniprot
Match: A0A6H5JIR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR3_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 3.660e-40
Identity = 71/102 (69.61%), Postives = 83/102 (81.37%), Query Frame = 0

Query:    4 FPLITEEVITKLVGEKDEYHLAASDVDTDYDLWSFWRDN--KTRLPHWYNVAKDIALIQPSSAFMERVFSILRACMDQRQESSFSDRIAAAALLKYKRGRGE 103
            FP +TE  + +L  + D+Y++AAS VDT YDLWSFW DN  K+ L HWY VAKDI L+QPSSAFMERVFSILRACMD RQE SFSDR+AA+ALLKY RGRG+
Sbjct:  656 FPFVTENDVARLKDQMDDYNIAASGVDTGYDLWSFWHDNRHKSSLCHWYGVAKDIVLLQPSSAFMERVFSILRACMDARQEKSFSDRVAASALLKYNRGRGK 757

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BLAST of mRNA_C-linearis_contig92.16890.1 vs. uniprot
Match: A0A6H5K4E0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4E0_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.400e-36
Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 0

Query:    4 FPLITEEVITKLVGEKDEYHLAASDVDTDYDLWSFWRDNKTRLPHWYNVAKDIALIQPSSAFMERVFSILRACMDQRQESSFSDRIAAAALLKYKRGR 101
            FP I+EE + KL+ EKD+Y++AA   D DYD W FW+D+K +LP W+ V  DIAL+QPSSAFMERVFS + +C+D  Q S  SDRI AAAL+KY RGR
Sbjct:   28 FPFISEEQVDKLLTEKDDYYVAARVTDRDYDFWQFWQDHKEKLPTWFAVVLDIALVQPSSAFMERVFSTVHSCLDSSQNSCLSDRIMAAALIKYNRGR 125

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BLAST of mRNA_C-linearis_contig92.16890.1 vs. uniprot
Match: A0A6H5KSI8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI8_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 4.090e-35
Identity = 62/96 (64.58%), Postives = 74/96 (77.08%), Query Frame = 0

Query:    4 FPLITEEVITKLVGEKDEYHLAASDVDTDYDLWSFWRDNKTRLPHWYNVAKDIALIQPSSAFMERVFSILRACMDQRQESSFSDRIAAAALLKYKR 99
            FP +T  ++ +LV EKD Y  AA+  D+  DLW+FW DN+  LP WYNVAKD+ALIQPSSAFMERVFS+LRACMD+RQE   SDRI A+ LLKY R
Sbjct:  413 FPFVTTAMVHELVVEKDLYSTAAAGTDSGCDLWAFWHDNRPELPAWYNVAKDVALIQPSSAFMERVFSLLRACMDERQEQCLSDRITASTLLKYNR 508

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BLAST of mRNA_C-linearis_contig92.16890.1 vs. uniprot
Match: A0A6H5JZH8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH8_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 3.000e-34
Identity = 58/102 (56.86%), Postives = 78/102 (76.47%), Query Frame = 0

Query:    1 LDPFPLITEEVITKLVGEKDEYHLAASDVDTDYDLWSFWRDNKTRLPHWYNVAKDIALIQPSSAFMERVFSILRACMDQRQESSFSDRIAAAALLKYKRGRG 102
            L  FP + ++++  L+ EK+++++AA+D DTDYD  +FW DNK  LP W+ +  D+ L+QPSSAFMERVFSILR C  +RQES +SDRI A+ALLKY RGRG
Sbjct:  291 LSVFPFVDDDMMDGLLKEKNDFYVAATDTDTDYDNMTFWSDNKKNLPTWHELVLDVVLLQPSSAFMERVFSILRCCFSERQESVYSDRICASALLKYSRGRG 392

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BLAST of mRNA_C-linearis_contig92.16890.1 vs. uniprot
Match: A0A6H5JW81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW81_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 1.960e-33
Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 0

Query:    5 PLITEEVITKLVGEKDEYHLAASDVDTDYDLWSFWRDNKTRLPHWYNVAKDIALIQPSSAFMERVFSILRACMDQRQESSFSDRIAAAALLKY 97
            P +T  V+  LV E D Y++AA++ D   DLW+FW DN+ +L  WYNVAKD+ALIQPSSAFMERVFS+LRAC+D RQE    DRI AAALLKY
Sbjct:  305 PFVTPTVVAALVEEMDAYNVAAAETDAGCDLWAFWHDNRLKLSAWYNVAKDVALIQPSSAFMERVFSVLRACVDDRQEHCLLDRIEAAALLKY 397

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BLAST of mRNA_C-linearis_contig92.16890.1 vs. uniprot
Match: A0A6H5KPF8_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF8_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 2.510e-33
Identity = 60/99 (60.61%), Postives = 72/99 (72.73%), Query Frame = 0

Query:    5 PLITEEVITKLVGEKDEYHLAASDVDTDYDLWSFWRDNKTRLPHWYNVAKDIALIQPSSAFMERVFSILRACMDQRQESSFSDRIAAAALLKYKRGRGE 103
            P +T  V+  LV E D Y++AA++ D   DLW+FW DN+ +L  WY VAKDIALIQPSSAFMERVFS+LRAC+D RQE    DRI AAALLKY   R +
Sbjct:   56 PFVTPTVVAALVEEMDAYNVAAAETDAGCDLWAFWHDNRLKLSAWYKVAKDIALIQPSSAFMERVFSVLRACVDDRQEHCLLDRIEAAALLKYNSRRAD 154

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BLAST of mRNA_C-linearis_contig92.16890.1 vs. uniprot
Match: A0A6H5KCX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCX4_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 1.270e-32
Identity = 54/103 (52.43%), Postives = 76/103 (73.79%), Query Frame = 0

Query:    1 LDPFPLITEEVITKLVGEKDEYHLAASDVDTDYDLWSFWRDNKTRLPHWYNVAKDIALIQPSSAFMERVFSILRACMDQRQESSFSDRIAAAALLKYKRGRGE 103
            L   P +  +++  L+ EK++Y++AASD D +Y   +FW+DN+ RLP W+ +  D+AL+QPSSAFMERVFSIL  C ++RQE  +SDRI A+ALLKY RGR +
Sbjct:   55 LKVLPFVKSKMVKGLLKEKEDYYMAASDTDIEYGHMAFWKDNEKRLPTWHALVLDVALLQPSSAFMERVFSILPCCFNERQEHVYSDRICASALLKYNRGRAQ 157

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BLAST of mRNA_C-linearis_contig92.16890.1 vs. uniprot
Match: A0A6H5JEX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX4_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 5.260e-32
Identity = 52/103 (50.49%), Postives = 76/103 (73.79%), Query Frame = 0

Query:    1 LDPFPLITEEVITKLVGEKDEYHLAASDVDTDYDLWSFWRDNKTRLPHWYNVAKDIALIQPSSAFMERVFSILRACMDQRQESSFSDRIAAAALLKYKRGRGE 103
            L   P + ++++  L+ EK+++++AASD + +Y   +FW DNK +LP W+ +  D+AL+QPSSAFMERVFSILR C ++RQE  +SDRI A+ LLKY RGR +
Sbjct:   55 LKVLPFVKKKMVRGLLKEKEDFYMAASDTEAEYGHMAFWNDNKKKLPTWHALVLDVALLQPSSAFMERVFSILRCCFNERQEHVYSDRICASVLLKYNRGRAQ 157

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BLAST of mRNA_C-linearis_contig92.16890.1 vs. uniprot
Match: A0A6H5L6R8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R8_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 4.670e-31
Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 0

Query:    4 FPLITEEVITKLVGEKDEYHLAASDVDTDYDLWSFWRDNKTRLPHWYNVAKDIALIQPSSAFMERVFSILRACMDQRQESSFSDRIAAAALLKYKRGR 101
            FP I+EE + KL+ EKD+Y++AA   D DYD W FW+D+K +LP W+ V  DIAL+QPSSAFMERVFS +R+C+D  Q S  SDRI AA L+KY  GR
Sbjct:  431 FPFISEEQVDKLLTEKDDYYVAARVTDRDYDFWQFWQDHKEKLPTWFAVVLDIALVQPSSAFMERVFSTVRSCLDSSQNSCLSDRIMAA-LIKYNGGR 527

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BLAST of mRNA_C-linearis_contig92.16890.1 vs. uniprot
Match: A0A6H5JCP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP4_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 2.380e-29
Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 0

Query:    1 LDPFPLITEEVITKLVGEKDEYHLAASDVDTDYDLWSFWRDNKTRLPHWYNVAKDIALIQPSSAFMERVFSILRACMDQRQESSFSDRIAAAALLKYKRGR 101
            L   P +  +++  L  EK+ Y +AASD D +Y    FW DNKT+LP W+ +  D+A +QPSSAFMER+FSILR C ++RQ+S +SDRI A+A LKY RGR
Sbjct:  273 LKVLPFVKSKMVRGLFKEKENYFMAASDTDAEYGHMGFWNDNKTKLPTWHALMLDVAFLQPSSAFMERLFSILRCCFNERQQSVYSDRICASAQLKYNRGR 373

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig92.16890.1 vs. uniprot

BLAST of mRNA_C-linearis_contig92.16890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JIR3_9PHAE	3.660e-40	69.61	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K4E0_9PHAE	1.400e-36	60.20	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KSI8_9PHAE	4.090e-35	64.58	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JZH8_9PHAE	3.000e-34	56.86	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JW81_9PHAE	1.960e-33	63.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KPF8_9PHAE	2.510e-33	60.61	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KCX4_9PHAE	1.270e-32	52.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JEX4_9PHAE	5.260e-32	50.49	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L6R8_9PHAE	4.670e-31	59.18	Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec...	[more]
A0A6H5JCP4_9PHAE	2.380e-29	52.48	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 27..82 e-value: 5.7E-8 score: 32.4
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 28..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig92	contig	C-linearis_contig92:644179..644490 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig92.16890.1	mRNA_C-linearis_contig92.16890.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig92 644179..644490 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig92.16890.1 ID=prot_C-linearis_contig92.16890.1|Name=mRNA_C-linearis_contig92.16890.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=104bp
LDPFPLITEEVITKLVGEKDEYHLAASDVDTDYDLWSFWRDNKTRLPHWY
NVAKDIALIQPSSAFMERVFSILRACMDQRQESSFSDRIAAAALLKYKRG
RGE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf