prot_C-linearis_contig92.16878.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig92.16878.1
Unique Nameprot_C-linearis_contig92.16878.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length458
Homology
BLAST of mRNA_C-linearis_contig92.16878.1 vs. uniprot
Match: A0A6H5K407_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K407_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 2.630e-66
Identity = 207/460 (45.00%), Postives = 241/460 (52.39%), Query Frame = 0
Query:   27 DDSAAMAMTVAA-ASPASSQGSWVVNPDDGWDGLGAGAV---------PVPRSPEAADQGLTQRQRRLSPASSPLRGLAQVRVSPPAAEYPAMMANM-HSPPQSPGSVRSVSSAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------IVPRSLAFETFEALEIQGFDQGSGGRAGGVGIGCTTVGDVNAMEMGMGM---GMDVAEFGEVNPAGEHEHAFVMRAAPGMTAAEAVEAIAEAAELRGITPTSVVLSHTQVSPSRTSGGGASPSLSLAQEGKENEDHAQEIMFRPGHNHSGHSPAVS-YRSMTPQRNPSPSSA-------AGVAGVPDVDAARVGGSRVPPGSMGTSTRIPMDSTVGIDVEXXXXXXXXXXXXXXXXHMERLWRWTGLITAAKMGVIPIIVCATVAALSTQTGGGGGDRG 452
            D SAA   T AA +SP SSQGSWVV+PDDGWD  G+  V          VP SPE+  +    R+  LSP SSPLR  AQV +SPPAAEYPAM  +  +SPP SPGSVRS+ S GS                                                                 + PRSL  ETFEALE QGF     G  GG G G  + G    ++ G+G    GMDV+ F +  PA E   AFVM AAPGMTAAEAVEAIAEAAEL GITPTSVVLS T +SPSR S G  SP+        E E+ AQ + FR  H     + A + +R+  P RN S S+A        GVA VPD+DA+R     VP  S   ST IPMD+ VG+ V+                  +RLWRWTG +TAAKMGVIPIIVCATVAALSTQ+  G  DRG
Sbjct:   14 DTSAAHVDTNAAPSSPTSSQGSWVVDPDDGWDDSGSTNVGPNELPPSAAVPPSPESPRR-EHHRRTPLSP-SSPLRSWAQVPMSPPAAEYPAMTTSTANSPPPSPGSVRSLKSVGSVSSDGGGGSSRRSVAGEGLVALARDENPTLDTTGALLLTPRLASKVMDTSDSAAPTGAVSRSPAVLAPRSLPLETFEALEAQGFS----GAWGGAGAGSASTGQDREVD-GVGAATAGMDVSGFPD--PADE---AFVMTAAPGMTAAEAVEAIAEAAELTGITPTSVVLSRTTMSPSRASSGRPSPN--------EGEEKAQGVTFRRAHGSPAATAAAARFRAREPLRNLSSSTANTAXXXXXGVARVPDIDASRDESVTVPAAS--GSTYIPMDTAVGMGVDVDDVDGTY----------DRLWRWTGFLTAAKMGVIPIIVCATVAALSTQSSSG--DRG 439          
BLAST of mRNA_C-linearis_contig92.16878.1 vs. uniprot
Match: D7FYP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP0_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 2.300e-63
Identity = 202/447 (45.19%), Postives = 238/447 (53.24%), Query Frame = 0
Query:   35 TVAAASPASSQGSWVVNPDDGWDGLGAGAVP---------VPRSPEAADQGLTQRQRRLSPASSPLRGLAQVRVSPPAAEYPAMMANM-HSPPQSPGSVRSVSSAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------IVPRSLAFETFEALEIQGFDQGSGGRAGGVGIGCTTVGDVNAMEMGMGM---GMDVAEFGEVNPAGEHEHAFVMRAAPGMTAAEAVEAIAEAAELRGITPTSVVLSHTQVSPSRTSGGGASPSLSLAQEGKENEDHAQEIMFRPGHNHSGHSPAVS--------YRSMTPQRNPSPSSAAGVAG--------VPDVDAARVGGSRVPPGSMGTSTRIPMDSTVGIDVEXXXXXXXXXXXXXXXXHMERLWRWTGLITAAKMGVIPIIVCATVAALSTQT 444
            + A +SP SSQGSWVV+PDDGWD  G+  V          VP SPE+      +   R +P+SSPLR  AQV +SPPAAEYPAM  N  +SPP SPGSVRS+ SAGS                                                             +VPR L FETFEALE QGF  G+ GRAG    G  + G    ++ G+G    GMDV+ F +  PA E   AFVM AAPGMTAAEAVEAIAEAAEL G+TPTSVVLS T VSPSR S G  SP+        E E+ A+ + FR  ++    SP  +        +R+  P RN S SS A            VPD+D +R     VP  S   ST IPMD+ VG+   XXXXXXXX          +RLWRWTG +TAAKMGVIPIIVCATVAALSTQ+
Sbjct:   22 SAAPSSPTSSQGSWVVDPDDGWDDSGSANVSPNELAPSAAVPPSPESP---RGEHHGRTTPSSSPLRSWAQVPMSPPAAEYPAMTTNTANSPPPSPGSVRSLKSAGSVSSGGGGSSRGSVAGEGLVALARDENPTPDTTPPLTSNVMDTSDSAAPRAVGSHSSHSPAVLVPRLLPFETFEALEAQGFS-GAWGRAG---AGSASTGQGREVD-GVGAATAGMDVSGFAD--PADE---AFVMTAAPGMTAAEAVEAIAEAAELTGVTPTSVVLSRTTVSPSRASSGRPSPN--------EGEEKAEGVTFRRANS----SPTAAXXXXXXXRFRAREPLRNLSASSTANXXXXXXXXXXRVPDIDPSRDDSVTVPAAS--GSTCIPMDTAVGMXXXXXXXXXXXGTY-------DRLWRWTGFLTAAKMGVIPIIVCATVAALSTQS 434          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig92.16878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K407_9PHAE2.630e-6645.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYP0_ECTSI2.300e-6345.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig92contigC-linearis_contig92:386668..395418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig92.16878.1mRNA_C-linearis_contig92.16878.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig92 386668..395679 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig92.16878.1 ID=prot_C-linearis_contig92.16878.1|Name=mRNA_C-linearis_contig92.16878.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=458bp
MASRGSGGRWQLELDTSVASGFNTINDDSAAMAMTVAAASPASSQGSWVV
NPDDGWDGLGAGAVPVPRSPEAADQGLTQRQRRLSPASSPLRGLAQVRVS
PPAAEYPAMMANMHSPPQSPGSVRSVSSAGSGGGGLVALARDQNQNQNQN
LNLNPMDISDGGMERSSSSSSSSSPASAAGAGAGIVPRSLAFETFEALEI
QGFDQGSGGRAGGVGIGCTTVGDVNAMEMGMGMGMDVAEFGEVNPAGEHE
HAFVMRAAPGMTAAEAVEAIAEAAELRGITPTSVVLSHTQVSPSRTSGGG
ASPSLSLAQEGKENEDHAQEIMFRPGHNHSGHSPAVSYRSMTPQRNPSPS
SAAGVAGVPDVDAARVGGSRVPPGSMGTSTRIPMDSTVGIDVEVDVEVDA
DVDGKYDGKHMERLWRWTGLITAAKMGVIPIIVCATVAALSTQTGGGGGD
RGGGESRG
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