prot_C-linearis_contig92.16864.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig92.16864.1
Unique Nameprot_C-linearis_contig92.16864.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length119
Homology
BLAST of mRNA_C-linearis_contig92.16864.1 vs. uniprot
Match: D8LSW5_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW5_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 6.250e-35
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 0
Query:   49 LQRSQVLVMDEATANIDQHTDSLIQDVVRTSFKCKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLL 119
            LQRSQ+LVMDEATANIDQHTDSLIQDVVRTSFK KTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPH+LL
Sbjct:  236 LQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLL 306          
BLAST of mRNA_C-linearis_contig92.16864.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 1.980e-33
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 0
Query:   49 LQRSQVLVMDEATANIDQHTDSLIQDVVRTSFKCKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLL 119
            LQRSQ+LVMDEATANIDQHTDSLIQDVVRTSFK KTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPH+LL
Sbjct: 1301 LQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLL 1371          
BLAST of mRNA_C-linearis_contig92.16864.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 1.980e-33
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 0
Query:   49 LQRSQVLVMDEATANIDQHTDSLIQDVVRTSFKCKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLL 119
            LQRSQ+LVMDEATANIDQHTDSLIQDVVRTSFK KTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPH+LL
Sbjct: 1332 LQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLL 1402          
BLAST of mRNA_C-linearis_contig92.16864.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 1.980e-33
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 0
Query:   49 LQRSQVLVMDEATANIDQHTDSLIQDVVRTSFKCKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLL 119
            LQRSQ+LVMDEATANIDQHTDSLIQDVVRTSFK KTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPH+LL
Sbjct: 1352 LQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLL 1422          
BLAST of mRNA_C-linearis_contig92.16864.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 1.450e-21
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 0
Query:   49 LQRSQVLVMDEATANIDQHTDSLIQDVVRTSFKCKTVIMVAHRLNTVIDCDQV 101
            LQR+Q+LVMDEATANIDQHTDSLIQDVVRTSFK KTVIMVAHRLNT+IDCDQV
Sbjct: 1251 LQRTQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQV 1303          
BLAST of mRNA_C-linearis_contig92.16864.1 vs. uniprot
Match: N6UIT0_DENPD (ABC transporter domain-containing protein (Fragment) n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6UIT0_DENPD)

HSP 1 Score: 92.8 bits (229), Expect = 3.020e-21
Identity = 43/71 (60.56%), Postives = 58/71 (81.69%), Query Frame = 0
Query:   49 LQRSQVLVMDEATANIDQHTDSLIQDVVRTSFKCKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLL 119
            ++++++LVMDEATAN+DQHTDSLIQ  +R +FK  TVI +AHR+NT+IDCD+V+V+  G  VE G PH LL
Sbjct:   75 VRKNKILVMDEATANVDQHTDSLIQTTIRQAFKDCTVITIAHRINTIIDCDRVLVMDHGQAVEFGPPHELL 145          
BLAST of mRNA_C-linearis_contig92.16864.1 vs. uniprot
Match: N6UP16_DENPD (ABC transporter domain-containing protein (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6UP16_DENPD)

HSP 1 Score: 91.7 bits (226), Expect = 4.090e-21
Identity = 42/71 (59.15%), Postives = 57/71 (80.28%), Query Frame = 0
Query:   49 LQRSQVLVMDEATANIDQHTDSLIQDVVRTSFKCKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLL 119
            ++ +++L+MDEATAN+DQHTDSLIQ  +R +FK  TVI +AHR+NT+IDCD+V+V+  G  VE G PH LL
Sbjct:   45 VRNNKILIMDEATANVDQHTDSLIQTTIRQAFKDCTVITIAHRINTIIDCDRVLVMDHGQAVEFGPPHELL 115          
BLAST of mRNA_C-linearis_contig92.16864.1 vs. uniprot
Match: A0A7S3Y5Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5Z6_HETAK)

HSP 1 Score: 95.5 bits (236), Expect = 7.310e-21
Identity = 48/71 (67.61%), Postives = 57/71 (80.28%), Query Frame = 0
Query:   49 LQRSQVLVMDEATANIDQHTDSLIQDVVRTSFKCKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLL 119
            L R +VLV+DEATAN+D  TD LIQD VRT F+  TVIM+AHRL+TVIDCDQ++VL +G VVE G PH LL
Sbjct:  257 LARHRVLVLDEATANVDLETDGLIQDAVRTKFQGCTVIMIAHRLHTVIDCDQILVLGDGRVVEQGAPHTLL 327          
BLAST of mRNA_C-linearis_contig92.16864.1 vs. uniprot
Match: N6TSN4_DENPD (ABC transporter domain-containing protein (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6TSN4_DENPD)

HSP 1 Score: 91.7 bits (226), Expect = 1.070e-20
Identity = 42/71 (59.15%), Postives = 57/71 (80.28%), Query Frame = 0
Query:   49 LQRSQVLVMDEATANIDQHTDSLIQDVVRTSFKCKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLL 119
            ++ +++L+MDEATAN+DQHTDSLIQ  +R +FK  TVI +AHR+NT+IDCD+V+V+  G  VE G PH LL
Sbjct:   85 VRNNKILIMDEATANVDQHTDSLIQTTIRQAFKDCTVITIAHRINTIIDCDRVLVMDHGQAVEFGPPHELL 155          
BLAST of mRNA_C-linearis_contig92.16864.1 vs. uniprot
Match: A0A835YMC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC7_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.290e-20
Identity = 50/71 (70.42%), Postives = 57/71 (80.28%), Query Frame = 0
Query:   49 LQRSQVLVMDEATANIDQHTDSLIQDVVRTSFKCKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLL 119
            LQRS++L+MDEATANID  TDSLIQ  VRT F   TVI VAHRL T+IDCD+V+VLS G V+E GHPH LL
Sbjct: 1682 LQRSKLLLMDEATANIDTGTDSLIQAAVRTQFSGCTVITVAHRLRTIIDCDRVLVLSHGQVLEEGHPHELL 1752          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig92.16864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSW5_ECTSI6.250e-3595.77ABC transporter domain-containing protein n=1 Tax=... [more]
D8LSW3_ECTSI1.980e-3395.77Multidrug resistance-associated protein-like prote... [more]
D8LSW4_ECTSI1.980e-3395.77Multidrug resistance-associated protein-like prote... [more]
A0A6H5JDN6_9PHAE1.980e-3395.77ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A6H5JDL0_9PHAE1.450e-2192.45ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
N6UIT0_DENPD3.020e-2160.56ABC transporter domain-containing protein (Fragmen... [more]
N6UP16_DENPD4.090e-2159.15ABC transporter domain-containing protein (Fragmen... [more]
A0A7S3Y5Z6_HETAK7.310e-2167.61Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
N6TSN4_DENPD1.070e-2059.15ABC transporter domain-containing protein (Fragmen... [more]
A0A835YMC7_9STRA1.290e-2070.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 7..119
e-value: 6.7E-21
score: 76.7
NoneNo IPR availablePANTHERPTHR24223:SF353ABC TRANSPORTER ATP-BINDING PROTEIN/PERMEASE VMR1-RELATEDcoord: 44..119
NoneNo IPR availablePANTHERPTHR24223FAMILY NOT NAMEDcoord: 44..119
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 49..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig92contigC-linearis_contig92:179933..180949 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig92.16864.1mRNA_C-linearis_contig92.16864.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig92 179933..180949 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig92.16864.1 ID=prot_C-linearis_contig92.16864.1|Name=mRNA_C-linearis_contig92.16864.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=119bp
PQAIRCTHVGRRGSSADERQRTVTGCSRIGRGRQPITWTAAIALPCQGLQ
RSQVLVMDEATANIDQHTDSLIQDVVRTSFKCKTVIMVAHRLNTVIDCDQ
VVVLSEGSVVEAGHPHLLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase