prot_C-linearis_contig92.16854.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig92.16854.1
Unique Nameprot_C-linearis_contig92.16854.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length53
Homology
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BLAST of mRNA_C-linearis_contig92.16854.1 vs. uniprot
Match: D7G448_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G448_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 4.740e-11
Identity = 31/43 (72.09%), Postives = 35/43 (81.40%), Query Frame = 0 
Query:    8 PRLPSRTKGVMVVMYRRLNACRSLLLATLYDGEETLLGVGLFF 50
            P  P + KGVM V+YRRLNA RSLLLATLYDGE+T +GVGL F
Sbjct:   19 PPAPLKNKGVMFVVYRRLNAGRSLLLATLYDGEDTSVGVGLVF 61
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig92.16854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G448_ECTSI4.740e-1172.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig92contigC-linearis_contig92:52144..52302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig92.16854.1mRNA_C-linearis_contig92.16854.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig92 52096..52767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig92.16854.1 ID=prot_C-linearis_contig92.16854.1|Name=mRNA_C-linearis_contig92.16854.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=53bp
MRREKVSPRLPSRTKGVMVVMYRRLNACRSLLLATLYDGEETLLGVGLFF
FV*
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