prot_C-linearis_contig91.16829.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig91.16829.1
Unique Nameprot_C-linearis_contig91.16829.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length607
Homology
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BLAST of mRNA_C-linearis_contig91.16829.1 vs. uniprot
Match: D7FP16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP16_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 4.840e-44
Identity = 120/239 (50.21%), Postives = 143/239 (59.83%), Query Frame = 0 
Query:  375 LSRQVESLLARVEFLEKRRAFEGVGWGAAAGGVSRGGSGAILNSRKGSEVAFLSEEGPGSDGSGARGSALVVTPPPRIGGRRGSGDLQHALGVSTTPFTGLDVLFRTPKQPQECHDPSHPQFHRHLHQPPLSPSRGQTRWAPAPIICTEHSDDADRNGDEELRRPRLTWSAGDG--------GLLPRGSEAAGAGRQAPASPPHYSLGEAGGGAAGRWALEGRMPPSDLGGDGRESLGQ 605
            LS+QVESLLARVEFLEK+R+FEG G G         GSG++LN+R+GSEV FL EE PG                         G+  HA+GVSTTPFTGLDVLFRTPKQPQE  +    ++ +H+  PPLSPSRG+TRWA AP +      +++    E  RR RLTW AGDG        G  P  ++  G   Q P SPP YSLG+A     G+WALE R P SDLGGDGR SL Q
Sbjct:  301 LSQQVESLLARVEFLEKQRSFEGAGVGCR-------GSGSLLNNRRGSEVGFLQEEHPGXXXXXXXXXXXXXXXXXXXXXXXXXGEGHHAVGVSTTPFTGLDVLFRTPKQPQESAE----RYSQHVIHPPLSPSRGKTRWA-APRVPPTDGGNSNVGHPESPRRSRLTWCAGDGQEAIEARGGRAPPRAQGEGPAVQQPPSPPLYSLGDA----RGKWALEARSP-SDLGGDGR-SLSQ 521
[Close]
BLAST of mRNA_C-linearis_contig91.16829.1 vs. uniprot
Match: A0A6H5KXP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXP0_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 5.570e-44
Identity = 119/240 (49.58%), Postives = 144/240 (60.00%), Query Frame = 0 
Query:  375 LSRQVESLLARVEFLEKRRAFEGVGWGAAAGGVSRGGSGAILNSRKGSEVAFLSEEGPGSDGSGARGSALVVTPPPRIGGRRGSG-DLQHALGVSTTPFTGLDVLFRTPKQPQECHDPSHPQFHRHLHQPPLSPSRGQTRWAPAPIICTEHSDDADRNGDEELRRPRLTWSAGDG--------GLLPRGSEAAGAGRQAPASPPHYSLGEAGGGAAGRWALEGRMPPSDLGGDGRESLGQ 605
            LS+QV+SLLARVEFLEK+R+FEG G       VS GGSG                          R   L++TPPPR+GG R +G +  HA+GVSTTPFTGLDVLFRTPKQPQE  +    ++ +H+  PPLSPSRG+TRWA AP + +   D+++    E  RR RLTW AGDG        G  P  ++  G   Q P SPP YSLG+A     G+WALE R P SDLGGDGR SL Q
Sbjct:  280 LSQQVQSLLARVEFLEKQRSFEGAG-------VSCGGSG--------------------------RAPPLILTPPPRLGGHRAAGGEGHHAVGVSTTPFTGLDVLFRTPKQPQESAE----RYTQHVVHPPLSPSRGKTRWA-APRVTSTDGDNSNIGQSESPRRSRLTWCAGDGQEAIEARGGRAPPRAQGEGPAVQQPPSPPLYSLGDA----RGKWALEARSP-SDLGGDGR-SLSQ 475
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig91.16829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP16_ECTSI4.840e-4450.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXP0_9PHAE5.570e-4449.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 372..392

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig91contigC-linearis_contig91:445763..449418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig91.16829.1mRNA_C-linearis_contig91.16829.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig91 445533..449418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig91.16829.1 ID=prot_C-linearis_contig91.16829.1|Name=mRNA_C-linearis_contig91.16829.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=607bp
MVVVETGRTDRCSGSSSTTTTITSTSTVSSKTEGLAIPSKGGGALHSGAS
QGNIFAPPATAGAPPGPTPDAPAKHHHQPPGIANGGSSSAISPASSGGLL
PSPSSSSSPCSTSTNTLSASPPPPLLPPPGESGGAAEVPAPVEGEKGTLR
CSPGQMATEEAAPAVVAAAEVEKGREGGPEGSGVLAGAAPREAREQSPPC
AADSGAGASTAPPPESDPVLLNGGADAGGNDGDATAVGAGFEARAASQSS
LPGAEGEQATVPPADEGEKTGAASSPSPPPPPPRRAFFAAPSSEHQRGAG
ADAVNLAANGVPAGFILPGGVKEGTGQQESLAAEAPSVGGAPATTRNSGA
ANGGGGGGAGGRKDDEEETSAAERLSRQVESLLARVEFLEKRRAFEGVGW
GAAAGGVSRGGSGAILNSRKGSEVAFLSEEGPGSDGSGARGSALVVTPPP
RIGGRRGSGDLQHALGVSTTPFTGLDVLFRTPKQPQECHDPSHPQFHRHL
HQPPLSPSRGQTRWAPAPIICTEHSDDADRNGDEELRRPRLTWSAGDGGL
LPRGSEAAGAGRQAPASPPHYSLGEAGGGAAGRWALEGRMPPSDLGGDGR
ESLGQLL
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