prot_C-linearis_contig91.16816.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig91.16816.1
Unique Name	prot_C-linearis_contig91.16816.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	100

Homology

[Close]

BLAST of mRNA_C-linearis_contig91.16816.1 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 3.380e-21
Identity = 44/94 (46.81%), Postives = 58/94 (61.70%), Query Frame = 0

Query:    1 QKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHW 93
            Q+ SWCD  +   W+   +  RP   S   Q   IL LDDFKCHKD+ F  +L  +A T  + IPGGLTP++QPLDR +NK  KR +R  YT++
Sbjct:  160 QEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFKCHKDDTFIAELKRQANTIVIFIPGGLTPLLQPLDRMLNKRMKRLLRGMYTNY 253

[Close]

BLAST of mRNA_C-linearis_contig91.16816.1 vs. uniprot
Match: A0A6H5L467_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L467_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 5.430e-21
Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 0

Query:    1 QKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 91
            Q+ SW D  + + W++  +  RP   S   Q   IL LDDFKCHKDE+F   L + A T  + IPGGL P++QPLDR +NK+ KR +R KYT
Sbjct:    6 QEKSWSDQRECNGWISGSWNLRPNNGSIVQQRPCILVLDDFKCHKDESFIAALKNDANTIVIFIPGGLAPLLQPLDRMLNKQMKRLLRGKYT 97

[Close]

BLAST of mRNA_C-linearis_contig91.16816.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.130e-20
Identity = 44/89 (49.44%), Postives = 58/89 (65.17%), Query Frame = 0

Query:    1 QKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRA 88
            Q+ SWCD  +   WL+E +  RP   S   Q  SIL LDDF+CH+ E+F + L  +  T  ++IPGGLTP++QPLDR +NKE KR MR 
Sbjct:  291 QEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRG 379

[Close]

BLAST of mRNA_C-linearis_contig91.16816.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 6.870e-20
Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 0

Query:    1 QKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 91
            Q+ SWCD  +   W+ + +  RP   S   Q   IL LDDFKCHKD+ F   L  +A T  + IPGGLTP++QPLDR +NK+ KR +R  YT
Sbjct:  335 QEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT 426

[Close]

BLAST of mRNA_C-linearis_contig91.16816.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 6.900e-20
Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 0

Query:    1 QKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 91
            Q+ SWCD  +   W+ + +  RP   S   Q   IL LDDFKCHKD+ F   L  +A T  + IPGGLTP++QPLDR +NK+ KR +R  YT
Sbjct:  342 QEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT 433

[Close]

BLAST of mRNA_C-linearis_contig91.16816.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 7.010e-20
Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 0

Query:    1 QKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 91
            Q+ SWCD  +   W+ + +  RP   S   Q   IL LDDFKCHKD+ F   L  +A T  + IPGGLTP++QPLDR +NK+ KR +R  YT
Sbjct:  372 QEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT 463

[Close]

BLAST of mRNA_C-linearis_contig91.16816.1 vs. uniprot
Match: A0A6H5L8W0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W0_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 7.560e-20
Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 0

Query:    1 QKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 91
            Q+ SW D  + + W++  +  RP   S   Q   IL LDDFKC KDE F   L   A T A+ IPGGLTP++QPLDR +NK+ KR +R KYT
Sbjct:    6 QEKSWSDQRECNGWISGSWKFRPNNGSIVQQRPCILVLDDFKCRKDEGFIAALKRDANTIAIFIPGGLTPLLQPLDRVLNKQMKRMLRGKYT 97

[Close]

BLAST of mRNA_C-linearis_contig91.16816.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.170e-19
Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 0

Query:    1 QKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 91
            Q+ SW D  + + W++  +  RP   S   Q   IL LDDFKCHKDE +   L   A T  ++IPGGLTP++QPLDR +NK+ KR +R KYT
Sbjct:  222 QEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYT 313

[Close]

BLAST of mRNA_C-linearis_contig91.16816.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 2.420e-19
Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 0

Query:    1 QKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 91
            Q+ SW D  + + W +  +  RP   S   Q   IL LDDFKCHKDE F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R+KYT
Sbjct:  156 QEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYT 247

[Close]

BLAST of mRNA_C-linearis_contig91.16816.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 4.600e-19
Identity = 44/92 (47.83%), Postives = 56/92 (60.87%), Query Frame = 0

Query:    1 QKASWCDTTQTDAWLTEEFMRRPG-ASGFSQPASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT 91
            Q+ SW D  + + W++  +  RP   S   Q   IL LDDFKCH DE F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R KYT
Sbjct:  417 QEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYT 508

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig91.16816.1 vs. uniprot

BLAST of mRNA_C-linearis_contig91.16816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FXD3_ECTSI	3.380e-21	46.81	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5L467_9PHAE	5.430e-21	47.83	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5K583_9PHAE	1.130e-20	49.44	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KE45_9PHAE	6.870e-20	47.83	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KRZ1_9PHAE	6.900e-20	47.83	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KYG9_9PHAE	7.010e-20	47.83	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5L8W0_9PHAE	7.560e-20	48.91	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JUK2_9PHAE	1.170e-19	47.83	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KII4_9PHAE	2.420e-19	48.91	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JHT8_9PHAE	4.600e-19	47.83	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004875	DDE superfamily endonuclease domain	PFAM	PF03184	DDE_1	coord: 2..96 e-value: 4.1E-11 score: 42.8
None	No IPR available	PANTHER	PTHR19303:SF21		coord: 13..96
None	No IPR available	PANTHER	PTHR19303	TRANSPOSON	coord: 13..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig91	contig	C-linearis_contig91:255864..256163 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig91.16816.1	mRNA_C-linearis_contig91.16816.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig91 255864..256163 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig91.16816.1 ID=prot_C-linearis_contig91.16816.1|Name=mRNA_C-linearis_contig91.16816.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=100bp
QKASWCDTTQTDAWLTEEFMRRPGASGFSQPASILTLDDFKCHKDEAFQQ
KLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004875	DDE_SF_endonuclease_dom