prot_C-linearis_contig91.16799.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig91.16799.1
Unique Nameprot_C-linearis_contig91.16799.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length319
Homology
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BLAST of mRNA_C-linearis_contig91.16799.1 vs. uniprot
Match: A0A6H5K2D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2D9_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 7.940e-6
Identity = 38/58 (65.52%), Postives = 40/58 (68.97%), Query Frame = 0 
Query:  255 PGASCFPPPLPRPAGAFGVVQEARAFAPAQHLAVLQALLN-GEEEQGDRGFQSDSDSE 311
            PG  CFPPPLP P+GA GV       APAQHLAVLQALLN G  E+G  G  SDSDSE
Sbjct:  388 PGTRCFPPPLPIPSGAGGV-------APAQHLAVLQALLNEGGGEEG--GSYSDSDSE 436
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig91.16799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K2D9_9PHAE7.940e-665.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig91contigC-linearis_contig91:87760..88716 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig91.16799.1mRNA_C-linearis_contig91.16799.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig91 87452..89793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig91.16799.1 ID=prot_C-linearis_contig91.16799.1|Name=mRNA_C-linearis_contig91.16799.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=319bp
MLNDWDGLPLGGTLAGGPVSRPEPKTASTSTNSESTRRTAPPPPPPAPSS
IDLSSVGAPGPSAAAAGGVMDSNKSVGIGAAASASAPPSASAAAGAAVSS
SVGGGGGRGGSATVLGGGTGAQVVSGIAASSPGAAANGGIGNNDKGSGSS
SSSSNNNNSASRVSSEGGCSSTSASSSSNSSNSRRKRSCNGSGGNAPPAA
APAAASGGGHDYSGVPSRNTPHHHPHNNTTTTTTTTTTNNNNNNRSKVGA
SPAYPGASCFPPPLPRPAGAFGVVQEARAFAPAQHLAVLQALLNGEEEQG
DRGFQSDSDSEREEDGPC*
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