prot_C-linearis_contig90.16780.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig90.16780.1
Unique Nameprot_C-linearis_contig90.16780.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length421
Homology
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: D8LDN0_ECTSI (Zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN0_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 4.280e-16
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:  370 DNTCIVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKTYS 419
            DNTCIVC + +V+CTLVPCGHHC C+ CAA FEQCPVCR  V+QKI+  S
Sbjct:  112 DNTCIVCFERKVDCTLVPCGHHCCCLTCAAQFEQCPVCRADVEQKIRAIS 161          
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: A0A6H5KTY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY3_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 5.230e-14
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0
Query:  369 SDNTCIVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKT 417
            +DN CIVC DNEV+CTLVPCGHHC C+ CA+ F  CPVCRT V  KIKT
Sbjct:  740 TDNCCIVCFDNEVDCTLVPCGHHCCCITCASKFSLCPVCRTTVTHKIKT 788          
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: D7FYF6_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF6_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.210e-13
Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 0
Query:  374 IVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKT 417
            +VC DNEV+CTLVPCGHHC C+ CA+ F  CPVCRT V  KIKT
Sbjct:   39 LVCFDNEVDCTLVPCGHHCCCITCASKFSLCPVCRTTVTHKIKT 82          
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: A0A6H5KTC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC5_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 2.000e-13
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:  370 DNTCIVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKTYS 419
            DN CIVC + +V+CTLVPCGHHC C+ CAA FEQCPVCR  V+QKI+  S
Sbjct:  628 DNMCIVCFERKVDCTLVPCGHHCCCLTCAAQFEQCPVCRADVEQKIRAIS 677          
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: A0A6H5KUU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU5_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 2.270e-10
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 0
Query:  373 CIVCMDNEVNCTLVPCGHHCTCVNCAAA-FEQCPVCRTIVDQKIKTYSA 420
            CIVC D  VNCT +PCGHHC C+ CA + F  CPVCR  +D+KIKT SA
Sbjct:  925 CIVCFDRPVNCTFMPCGHHCCCMPCAESMFNLCPVCRVAIDKKIKTISA 973          
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: D7FYF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF4_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.210e-9
Identity = 31/51 (60.78%), Postives = 35/51 (68.63%), Query Frame = 0
Query:  371 NTCIVCMDNEVNCTLVPCGHHCTCVNCAAA-FEQCPVCRTIVDQKIKTYSA 420
            N CIVC D  VNCT VPCGHHC C+ CA +    CPVC   +D+KIKT SA
Sbjct:  848 NACIVCFDRPVNCTFVPCGHHCCCMPCAESKLNLCPVCGVAIDKKIKTISA 898          
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: A0A7V3CZL7_9BACT (RING-type domain-containing protein n=1 Tax=Ignavibacteria bacterium TaxID=2053306 RepID=A0A7V3CZL7_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 9.420e-9
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:  371 NTCIVCMDNEVNCTLVPCGHHCTCVNCAAAF--EQCPVCRTIVDQKIKTY 418
            NTC+VC   E NC  VPCGH CTC +CA +    +CP+CR ++ +K+KT+
Sbjct:  235 NTCVVCFSKERNCCFVPCGHLCTCYDCAKSITDNKCPICRAVIKEKVKTF 284          
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: UPI000F4FF043 (E3 ubiquitin-protein ligase XIAP n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F4FF043)

HSP 1 Score: 66.2 bits (160), Expect = 4.150e-8
Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 0
Query:  373 CIVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKTYS 419
            C VCMD++V+   VPCGH  TC+ C+ +  +CP+C T++ QKIKTYS
Sbjct:  416 CKVCMDSDVSIVFVPCGHFVTCMKCSKSLHKCPICCTVIAQKIKTYS 462          
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: UPI00193A5BE5 (baculoviral IAP repeat-containing protein 8-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A5BE5)

HSP 1 Score: 65.1 bits (157), Expect = 9.700e-8
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 0
Query:  373 CIVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKTY 418
            C +C+D E N   VPCGH  TCV+CA     CP+CR+ V QKIKTY
Sbjct:  413 CKICLDEEANVVFVPCGHLSTCVSCAQRVSNCPICRSYVRQKIKTY 458          
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Match: UPI001885041E (baculoviral IAP repeat-containing protein 7-B-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001885041E)

HSP 1 Score: 58.5 bits (140), Expect = 1.590e-7
Identity = 23/46 (50.00%), Postives = 29/46 (63.04%), Query Frame = 0
Query:  373 CIVCMDNEVNCTLVPCGHHCTCVNCAAAFEQCPVCRTIVDQKIKTY 418
            C VCMD +V    +PCGH  TCVNCA A   CP+CR  +   ++TY
Sbjct:   27 CKVCMDEDVGVVFLPCGHLITCVNCAPALRDCPLCRQPIRGTVRTY 72          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDN0_ECTSI4.280e-1670.00Zinc finger protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KTY3_9PHAE5.230e-1471.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF6_ECTSI1.210e-1370.45RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KTC5_9PHAE2.000e-1368.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUU5_9PHAE2.270e-1063.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF4_ECTSI1.210e-960.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7V3CZL7_9BACT9.420e-950.00RING-type domain-containing protein n=1 Tax=Ignavi... [more]
UPI000F4FF0434.150e-853.19E3 ubiquitin-protein ligase XIAP n=1 Tax=Tachysuru... [more]
UPI00193A5BE59.700e-856.52baculoviral IAP repeat-containing protein 8-like n... [more]
UPI001885041E1.590e-750.00baculoviral IAP repeat-containing protein 7-B-like... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 348..420
e-value: 1.4E-16
score: 61.7
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 370..413
e-value: 1.1E-10
score: 41.1
NoneNo IPR availablePANTHERPTHR14879CASPASE REGULATOR, RING FINGER DOMAIN-CONTAININGcoord: 341..419
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 366..414
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 373..408
score: 11.073

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:533583..536416 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16780.1mRNA_C-linearis_contig90.16780.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig90 532624..536980 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig90.16780.1 ID=prot_C-linearis_contig90.16780.1|Name=mRNA_C-linearis_contig90.16780.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=421bp
MNYASDSSSSSDEMGGYGSLGYPIVSPPYFNALGGYPIAAPPFSNGLGGC
PFAAPAYPNGVGGYPNMAAPYLSEGNGHSAETEEVVDESWSKRELKDECA
RLGLRNFNRLNKDRLIRLLNGEPSPPTYNAPQSVTPPNQNGRIVDARETS
SYSIERAGQSWETEGSVDGSWTKRELKYECGRRGLRNFNRLNKYSLVRLL
NEGVRPRPALANPHGGSVNAIQTSSYADSSPFSNERPLYPEENAGSVNES
QPVGGGQAQMRESPAREFSPPTQENAHWAPAPLRPINESATPTNRYGRVV
GASETSAYPAGGGGYGGHPTEAFTPSNEMIGHSEDNSEFVGGSSPVEAPG
NKPHNNHSNTNSRGNKNNSDNTCIVCMDNEVNCTLVPCGHHCTCVNCAAA
FEQCPVCRTIVDQKIKTYSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING