prot_C-linearis_contig90.16765.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig90.16765.1
Unique Nameprot_C-linearis_contig90.16765.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1680
Homology
BLAST of mRNA_C-linearis_contig90.16765.1 vs. uniprot
Match: D7FTD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD3_ECTSI)

HSP 1 Score: 553 bits (1426), Expect = 6.880e-179
Identity = 291/431 (67.52%), Postives = 340/431 (78.89%), Query Frame = 0
Query:    1 MHTSSRLSVADARAIIGLPGARGSATIASDASSFEREYASRT-LGGSMLPPTRELGSTLKSRFAAIARKNGASHKETRGRGRSLVGRRANLEEGRPYDRDGNGPSAEERRALSLPIQRFQKTGRRVVRQCLERSLELAPINKERLGRLGSLELMDGDLESAVEHLRLATKGSNDDAAWVALARAEVRLWERDPAIGHEHLRCACDAYRHSIDLLEPGFVQALELPTRLLELGGVYESFGSFEGALYIYQRTASSMPLSSGFEDVLFRCAVVMRYMSTLERAPRESLLQSALEHLDLILQEQTMRKGRSVQTAWLLYADICLSLGEGSAVAKAWAKSAYQEVFNNRQRQGDTNAMAFGDWDDWIASPDTQLQFAKEWGERGEPALAFLAFEKSIKAFDLENETSPGSTAGPPFDALMDASEALASFQRFSRQ 430
            M TS+RLSV DARAI+GLP  RGS++  +D S  ++  AS   L GS+    RE G TLKSRFA++ARK+GA  KETR  GRSLVGRRANLE     D D    SA  +  L  P+QRFQK GR++VRQ L+  L+  P +++ LGRLGSLE+ DGDLE+A+EHLRLA KGS+DD AW  LARAEVR WE+DPA GHE LR ACDAYR S+DLLEPGFVQ  ELP RLLELGGVYESFGSFEGAL+IYQR ASSMPLSSGFE VLFRCAVVMRYM+TLERAPR  LL+SALEHLDLI+QEQ +RKG   ++A LLYAD+C++L EGSAVAK WAK++YQEVF+NR+ QGD +AM F DWDDWIASP+TQLQ +KEW ++GEPALA LAFEK+++AF  + E SP S A P F ALMDASEA ASFQRF RQ
Sbjct:    1 MLTSNRLSVVDARAIVGLPAVRGSSSSTTDLSPLDQHRASPAHLDGSVPLLGREFGGTLKSRFASLARKSGADRKETRDHGRSLVGRRANLEGRLGDDGDPGRVSAGTQEPLVSPLQRFQKAGRKIVRQGLQHRLQATPDDRKLLGRLGSLEVADGDLENAIEHLRLAAKGSDDDVAWTTLARAEVRAWEQDPATGHERLRWACDAYRRSVDLLEPGFVQVWELPARLLELGGVYESFGSFEGALHIYQRIASSMPLSSGFEGVLFRCAVVMRYMATLERAPRNGLLESALEHLDLIMQEQALRKGFFAESAALLYADVCMALAEGSAVAKGWAKASYQEVFDNRKAQGDKHAMTFRDWDDWIASPETQLQLSKEWSQKGEPALAVLAFEKALEAFGRQKEISPSSKAEPSFSALMDASEAYASFQRFVRQ 431          
BLAST of mRNA_C-linearis_contig90.16765.1 vs. uniprot
Match: A0A6H5KAC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC9_9PHAE)

HSP 1 Score: 375 bits (962), Expect = 5.790e-107
Identity = 248/571 (43.43%), Postives = 318/571 (55.69%), Query Frame = 0
Query: 1099 MKPSAPGSHFFPPFVSAGASGEAVSVSSPVVFEMVQDAADDEENXXXXXXXXAVGVADNGVAGRGAGWHGLMLYSRRPGISHKSPVFQQAIQLATIAFSPDVRHPPPPSSPALAFSLPCLGSTSDRADESRCLKPTLTTTAALDGPLPSSARRART---LYIRRQGGPAHLAGRKKGRSGFDLKTRPQLLGDF-TLVRTPGRE-KQVARVKVKTSSGGNLAP------VVRSLTPPPAPLKMTAGVDVDGTISMTPASMLAALQPARVFDSGDMMMAAGLLGHPESSLKRLVLHRARINTAAGREAFLRCLAINKLGCLALGACTWLEDAGANKPENARQQELQSGRWWEEVCDTIRTKAFRLQELVVEGLDQGGDALGNALGVTLDDYFVNRFGNLSSIVVVRCKISDEGAVAIARGIYASNTLAHVDLSANKISDVGVEALAKVLVGEYPGGRDDGDAEQDAKSHGNEQLVIHHHEEGWPCRRAPVLKTLDLGQNRMMDPGGQALAAALPRSMSLESLTXXXXXXXXXXXXXXLAGAAASQATLRDIHCEGNLFGNDMCGRIALTLMHR 1658
             +PSAPGS FFPPF    A+ +  ++ +PVVFEMVQDAADDEE+            ADN  AGR  GWHGL LY R PG+  +S VFQQA+QL TIAFSPDV+ PP  + P      PC G  S R  ++  ++P   T           A   R    + +     P   AGR+K R+    K RP+   +  +L RTP  E +Q  +V+V   +     P      VV+S TP P     T     DG+IS+TPA +  A   + +FDSGDM+M A LL HPE SLK LVLHRA+++T  GREA L+CL +NKL  LALG C W + A   + + +RQ E  +GRWWE+VCDTIRT AFRL+E+VVEGL++GGDALG  +G  L DYF  RFG L+S+ +VRC ISD+GA A+ARGI+AS+ L HVDLS                                       +L +      W  R         + QNR+ DPGG  L AALPRS+SLES+T              L+ AA+S+ TL+++HCEGNLF  D+CG IA  L  R
Sbjct:  252 FEPSAPGSRFFPPFGHTDAASDG-ALCAPVVFEMVQDAADDEEDADG---------ADNDAAGRVRGWHGLTLY-RSPGVDQRSAVFQQALQLETIAFSPDVQTPPRSTPP----ESPCRGLGSSRMYDASSVRPQPATAFCHRQSASCRALACRDQERIGLGMSSLPERGAGRQKRRTDIASKPRPRPWDELESLARTPRVETEQEQQVRVVGGTYFATPPELHRYGVVKS-TPSPPQFTTTKP---DGSISVTPAPLHVASAASTLFDSGDMIMVARLLAHPECSLKGLVLHRAKLDTPPGREALLKCLELNKLCRLALGGCVWFDHA--LRTDKSRQYEWLTGRWWEKVCDTIRTNAFRLREVVVEGLERGGDALGTGIGTMLGDYFAKRFGRLASVSLVRCGISDQGATAVARGIWASSGLTHVDLS---------------------------------------ELCLRR----WSIR---------VNQNRITDPGGTMLGAALPRSVSLESITLSYNFMMEEAAQALLSAAASSRPTLKEVHCEGNLFDEDLCGHIAQALKRR 749          
BLAST of mRNA_C-linearis_contig90.16765.1 vs. uniprot
Match: A0A6H5K7H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7H6_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 4.240e-82
Identity = 175/284 (61.62%), Postives = 196/284 (69.01%), Query Frame = 0
Query:    1 MHTSSRLSVADARAIIGLPGARGSATIASDASSFEREYASRTLGGSMLP-PTRELGSTLKSRFAAIARKNGASHKETRGRGRSLVGRRANLEEGRPYDRDGNGPSAEERRALSLPIQRFQKTGRRVVRQCLERSLELAPINKERLGRLGSLELMDGDLESAVEHLRLATKGSNDDAAWVALARAEVRLWERDPAIGHEHLRCACDAYRHSIDLLEPGFVQALELPTRLLELGGVYESFGSFEGALYIYQRTASSMPLSSGFEDVLFRCAVVMRYMSTLERAPRE 283
            M TS+RLSVADARAI+GLP  + S+   +D S  ++ +AS       +P P RE G TLKSRFAA+ARK GA  KETR   RSLVGRRANLE     D D    S   +  L  P+QR                        + LGRLGSLE+ DGDLE+AVEHLRLA KGS+DD AW  LARAEVR W++DPA GHE LR ACDAYR S+DLLEPGFVQ  ELP RLLELGGVYESFGSFEGAL+IYQR ASSMPLSSGFEDVLFRCAVVMRYM+TL   P E
Sbjct:    1 MLTSNRLSVADARAIVGLPAVQESSASTTDLSPLDQRHASPACWDGSVPLPAREFGGTLKSRFAALARKRGAERKETRDHRRSLVGRRANLEGRLGGDGDPGRVSPGTQEPLVSPVQR------------------------KLLGRLGSLEVADGDLENAVEHLRLAAKGSDDDVAWTTLARAEVRAWQQDPATGHERLRWACDAYRRSVDLLEPGFVQVWELPARLLELGGVYESFGSFEGALHIYQRIASSMPLSSGFEDVLFRCAVVMRYMATLAFLPLE 260          
BLAST of mRNA_C-linearis_contig90.16765.1 vs. uniprot
Match: D7FTD1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD1_ECTSI)

HSP 1 Score: 242 bits (618), Expect = 6.230e-68
Identity = 156/391 (39.90%), Postives = 208/391 (53.20%), Query Frame = 0
Query: 1263 PAHLAGRKKGRSGFDLKTRPQLLGDFTLVRTPGREKQVARVKVKTSSGGNLAP-------VVRSLTPPPAPLKMTAGVDVDGTISMTPASMLAALQPARVFDSGDMMMAAGLLGHPESSLKRLVLHRARINTAAGREAFLRCLAINKLGCLALGACTWLEDAGANKPENARQQELQSGRWWEEVCDTIRTKAFRLQELVVEGLDQGGDALGNALGVTLDDYFVNRFGNLSSIVVVRCKISDEGAVAIARGIYASNTLAHVDLSANKISDVGVEALAKVLVGEYPGGRDDGDAEQDAKSHGNEQLVIHHHEEGWPCRRAPVLKTLDLGQNRMMDPGGQALAAALPRSMSLESLTXXXXXXXXXXXXXXLAGAAASQATLRDIHCEGNLFGND 1646
            P   AGR+KGR+    K RP+   +   +    RE++    +V+   G   A        VV+S+   P+P + T     DG +S+T A +  A + + +FDSGDM+M A LL HPE SLK  VLHRA+++T  GREA L+CL +NKL  LALG C W +DA   + +N+RQ E ++GRWWE+VCDTIRT AFRL+E+VVEGL++                                                          AN ISDVGVEALA+ LVG+YP   D+G           E+     HEE +   R P++KTLDLGQNR+ DPGG  L AALPRS+ LES+T              L+ AA+S+ TL++IHCEGNLF  +
Sbjct:    5 PERGAGRQKGRTDDASKPRPRPWDELESLEHTRREEREQEQQVRDVGGTYFATPELHHYGVVKSI---PSPPQFTT-TKPDGAMSVTTAPLHVASEASTLFDSGDMIMVAALLAHPECSLKGFVLHRAKLDTPPGREALLKCLELNKLSRLALGGCVWFDDA--MRTDNSRQYEWRTGRWWEKVCDTIRTSAFRLREVVVEGLER----------------------------------------------------------ANAISDVGVEALAQALVGDYPLDLDEG-----------EEGASGSHEEPFRSHRPPLIKTLDLGQNRITDPGGTTLGAALPRSVFLESITLSYNFMMEEAAQALLSAAASSRPTLKEIHCEGNLFDEE 320          
BLAST of mRNA_C-linearis_contig90.16765.1 vs. uniprot
Match: D7FTD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD2_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.720e-50
Identity = 117/197 (59.39%), Postives = 145/197 (73.60%), Query Frame = 0
Query:  645 RKMKAVVVHVQCQMRRYLARRELDRRVKLAAERTRAASFIQHAYRARTLQWGYAIAKAQRAREREIAEAKLGAAGKLQATWRMKLGGNVANRRRRAIVDIQRSSRAFLTRKHAGARKNRLVPRYKRQYRRHLERFAILRALMAMRISRELREARAKEVERRFRAMEEERPLGGTGGGAAI-TPLEARRAARANQRLL 840
            R+ KA  + +QCQ+RR+ ARRE+DRR+  AA+R RAA+FIQ  YRAR LQW YA+ +AQ ARER+IA+AKLG++ KLQATWRMK        RRRA+ DIQRS+R FL R+ A  RK+ LV R +RQYRRH ER  IL AL+A       +E RA+EVERRFRA+EE+R LG T G  AI TPL+ RRA RA++RLL
Sbjct:   27 RQRKAAAIRLQCQLRRFFARREVDRRISHAAQRIRAATFIQRVYRARALQWSYAVKRAQLARERKIAKAKLGSSIKLQATWRMKQARYEVVVRRRAVSDIQRSTRGFLGRRRAAERKHALVTRIQRQYRRHRERMVILTALLAXXXXXXXKEERAREVERRFRALEEQR-LGNTSGSEAIATPLDKRRAERAHKRLL 222          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FTD3_ECTSI6.880e-17967.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAC9_9PHAE5.790e-10743.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7H6_9PHAE4.240e-8261.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTD1_ECTSI6.230e-6839.90Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FTD2_ECTSI1.720e-5059.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 792..812
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 1601..1628
e-value: 37.0
score: 6.1
coord: 1509..1536
e-value: 25.0
score: 7.3
coord: 1573..1600
e-value: 0.025
score: 23.7
coord: 1481..1508
e-value: 250.0
score: 0.2
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 1445..1650
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 1367..1656
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 646..668
e-value: 0.45
score: 19.6
coord: 611..633
e-value: 6.7
score: 15.1
coord: 736..758
e-value: 7.7
score: 14.6
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 647..676
score: 7.382
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 737..766
score: 7.035
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 612..641
score: 7.913
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 1576..1595
e-value: 1.7
score: 8.9
coord: 1509..1531
e-value: 0.0029
score: 17.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 125..300
e-value: 6.0E-9
score: 37.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1418..1536
e-value: 7.4E-11
score: 43.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1570..1665
e-value: 6.8E-11
score: 44.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:213235..229417 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16765.1mRNA_C-linearis_contig90.16765.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig90 213235..229417 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig90.16765.1 ID=prot_C-linearis_contig90.16765.1|Name=mRNA_C-linearis_contig90.16765.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1680bp
MHTSSRLSVADARAIIGLPGARGSATIASDASSFEREYASRTLGGSMLPP
TRELGSTLKSRFAAIARKNGASHKETRGRGRSLVGRRANLEEGRPYDRDG
NGPSAEERRALSLPIQRFQKTGRRVVRQCLERSLELAPINKERLGRLGSL
ELMDGDLESAVEHLRLATKGSNDDAAWVALARAEVRLWERDPAIGHEHLR
CACDAYRHSIDLLEPGFVQALELPTRLLELGGVYESFGSFEGALYIYQRT
ASSMPLSSGFEDVLFRCAVVMRYMSTLERAPRESLLQSALEHLDLILQEQ
TMRKGRSVQTAWLLYADICLSLGEGSAVAKAWAKSAYQEVFNNRQRQGDT
NAMAFGDWDDWIASPDTQLQFAKEWGERGEPALAFLAFEKSIKAFDLENE
TSPGSTAGPPFDALMDASEALASFQRFSRQETTETDWLVRKALELEPENE
EAKCLLREFLGDENCLRREMGLQVVLHLQSKWRTRIWQGQYLLYLRNRLQ
TMLEERLAKNRLDVEAREQLGYFFRDKHRPVLLFEDRCARVIQRLGRAGL
FRLRWFKVKQRAYRKELTNALKLWQKSGYTAESRQIIRARAASRYAPATH
KIVSVVELMRRQDEAAPFIQRAARNLLARKMFRKILKNRSRDLRRKMKAV
VVHVQCQMRRYLARRELDRRVKLAAERTRAASFIQHAYRARTLQWGYAIA
KAQRAREREIAEAKLGAAGKLQATWRMKLGGNVANRRRRAIVDIQRSSRA
FLTRKHAGARKNRLVPRYKRQYRRHLERFAILRALMAMRISRELREARAK
EVERRFRAMEEERPLGGTGGGAAITPLEARRAARANQRLLERRAKGSCVL
RARKWRLQQQQQASKSPLPPKAPASAPAPSVPAPSSPGPSPSSSAATLPA
SIDSRDSRDSRDDNDTPSPCHHDDDDHHHHHPPPCRVTTATATATGTATG
TATTWGTGIPGSAAVEGEPVPTCDCPPAPLLEEEASASSGDKVGAPATET
SRRHLLQSPGPALLASTRPSPPSGNVNGCVERDPSPPPTSPALAAALTCA
HGIGGRLGTPLGSPFPASAEGWVAGRSASAFARATAARTATGPGGGGGMK
PSAPGSHFFPPFVSAGASGEAVSVSSPVVFEMVQDAADDEENVAAAAAAA
AVGVADNGVAGRGAGWHGLMLYSRRPGISHKSPVFQQAIQLATIAFSPDV
RHPPPPSSPALAFSLPCLGSTSDRADESRCLKPTLTTTAALDGPLPSSAR
RARTLYIRRQGGPAHLAGRKKGRSGFDLKTRPQLLGDFTLVRTPGREKQV
ARVKVKTSSGGNLAPVVRSLTPPPAPLKMTAGVDVDGTISMTPASMLAAL
QPARVFDSGDMMMAAGLLGHPESSLKRLVLHRARINTAAGREAFLRCLAI
NKLGCLALGACTWLEDAGANKPENARQQELQSGRWWEEVCDTIRTKAFRL
QELVVEGLDQGGDALGNALGVTLDDYFVNRFGNLSSIVVVRCKISDEGAV
AIARGIYASNTLAHVDLSANKISDVGVEALAKVLVGEYPGGRDDGDAEQD
AKSHGNEQLVIHHHEEGWPCRRAPVLKTLDLGQNRMMDPGGQALAAALPR
SMSLESLTVSHNFMMEDAAQALLAGAAASQATLRDIHCEGNLFGNDMCGR
IALTLMHRHRDTARRPPTPVMQTPRPRGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
IPR001611Leu-rich_rpt
IPR011990TPR-like_helical_dom_sf
IPR032675LRR_dom_sf