prot_C-linearis_contig90.16763.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig90.16763.1
Unique Nameprot_C-linearis_contig90.16763.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length251
Homology
BLAST of mRNA_C-linearis_contig90.16763.1 vs. uniprot
Match: D7FTC8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTC8_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 4.600e-84
Identity = 144/226 (63.72%), Postives = 171/226 (75.66%), Query Frame = 0
Query:   27 KCEREGEEEXXXXXXXXSNTISQYELQRLERIKRNNAFIASLSLGSPNKAPSPQS--TKRRPPAKRQRSSKPRRVPSRTSRRLKGESIDPDDFVALPGTWIGSLAIATSKPGTAPPSFRRDYGPELNAEEAEKRMEVLKEQIDERDDARAGTASYQHCLHRVRTMSDAQLARRVRTIERARGAKAKEKILVFSNVLRARGKTDLLEMAEAALDRLVRGVPMPEQGS 250
            K +R G ++           +S YEL RL RIKRN AF+A+LS+ +   APS  +  TK+R P+KR R    R  PSRTS+RL+ ++ DP++ VALPGTW  SLA AT+KPG AP SFR DYGPEL+ EEAE+RMEVLK  ID RD+A+AGTASY HCLHRVRTMSD  LARRVRTIERARGA+AKEK+LVFS VL A+GKTDL E+AEAALDRLVRG+PMPE  S
Sbjct:    5 KTKRPGPQQDHATAKEGEAEVSDYELARLARIKRNEAFMATLSISALKTAPSTAAAATKKRSPSKRPRDPASRTAPSRTSKRLRSQAADPEELVALPGTWTSSLAGATTKPGGAPSSFRHDYGPELDPEEAEERMEVLKGHIDARDEAKAGTASYNHCLHRVRTMSDVSLARRVRTIERARGAQAKEKMLVFSRVLTAKGKTDLAEVAEAALDRLVRGLPMPEMES 230          
BLAST of mRNA_C-linearis_contig90.16763.1 vs. uniprot
Match: A0A8J5XV63_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XV63_DIALT)

HSP 1 Score: 69.7 bits (169), Expect = 1.070e-10
Identity = 67/204 (32.84%), Postives = 97/204 (47.55%), Query Frame = 0
Query:   50 YELQRLERIKRNNAFIASLSLGSPNKAPSPQSTKRRPPAKRQRSSKPRRVPSRTSRRLKGESIDPDDFVALPGTWIGSLAIATSKPGTA---PPSFRRDYGP---ELNAEEAEKRMEVLKEQIDERDDARAGTASYQHCLHRVRTMSDAQLARRVRTIERARGAKAKEKILVFSNVLRARGKTDLLEMAEAALDRLVRGVPMPE 247
            YE    E I+RN A + +L L   N+  + +  + R  A  QR+SK R   ++      G+S +           +  LA A          PP  RR       +   E    R + L+    +R  +  G+ASY+H LHRV TMS+AQL+RR+  IERA G  A  K+ +F++VL   G   L E A AA  RLV  + +P+
Sbjct:    7 YEAMIAENIRRNRAVMEALGL---NRTDACKHEELRNAADGQRTSKKRASKTQAHAANLGDSGERHREAVRRSQRLADLASAAPLDACTEIDPPGARRKRAAGDIDCTGEHKAARDDHLRWAGSQRRASVVGSASYEHTLHRVMTMSEAQLSRRMNAIERACGQHAVVKMRLFASVLALEGYAHLAEEANAAHQRLVEKLGLPQ 207          
BLAST of mRNA_C-linearis_contig90.16763.1 vs. uniprot
Match: C1FFT4_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FFT4_MICCC)

HSP 1 Score: 70.5 bits (171), Expect = 1.140e-10
Identity = 70/225 (31.11%), Postives = 101/225 (44.89%), Query Frame = 0
Query:   45 NTISQYELQRLERIKRNNAFIASLSLGSPN----------------KAPSPQSTKRR--PPAKRQRSSKPRRVPSRTSRRLKGESIDP----DDFVALPGTWIGSLAIATSKPGTAPPSFRRDYGPELNAEEAEKRMEVLKEQIDERDDARAGTASYQHCLHRVRTMSDAQLARRVRTIERARGAKAKEKILVFSNVLRARGKTDLLEMAEAALDRLVRGVPMPE 247
            N +S YEL+R+ERI+RN   +  L LG  +                 A  P   K+R  P AK++         +R SRR+  +  +     DD        +G    A    G            E  AE    R   ++E++     +  GTASYQH L RVRTMS+  L  RV+ IERA+G  A  K+ +F+ VL   G  +L  +A  +L+RLV  +  P+
Sbjct:   58 NGLSDYELERIERIRRNREIMKRLGLGDHDIVSAARQRCGVEEGKENASGPTENKKRKAPAAKKKHEIPAEERATRRSRRIATKDAEHAGLGDDHEETETYIVGRGEYAVEVDGAH----------EAEAEAYRLRNAGIQERV-----SVVGTASYQHTLMRVRTMSEPALGNRVKAIERAKGKHAVVKMKLFARVLFLEGYEELSTLATESLERLVAELGDPD 267          
BLAST of mRNA_C-linearis_contig90.16763.1 vs. uniprot
Match: A0A7S0D6P6_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0D6P6_MICPS)

HSP 1 Score: 68.9 bits (167), Expect = 2.900e-10
Identity = 66/225 (29.33%), Postives = 110/225 (48.89%), Query Frame = 0
Query:   47 ISQYELQRLERIKRNNAFIASLSLGSPNKAPSPQSTKRRPPAKRQRSSKPRRVPSRTSRRLKGESIDP--DDFVALPGTWIGSLAIATSKPGTAPPSFRRDYGPELNAEEAEKRMEVLKE----QIDERD--DARA---------------GTASYQHCLHRVRTMSDAQLARRVRTIERARGAKAKEKILVFSNVLRARGKTDLLEMAEAALDRLVRGVPMPEQ 248
            ++ YEL+R+  I+RN   +  L LG  +   + ++       K + S K RR+ +R ++R + E+++   +  +      + +  +      T       D   + ++ +  K+  + K     ++DER   DARA               GTASYQH L RVRTMSD+ LA R++ IERA+G  A  K+ +F+ VL   G   L + A AAL RL+  +  P++
Sbjct:   14 LTDYELERVAHIRRNREIMRQLGLGDHDIVTAARARCGEKDVKSEPSGKRRRMENRNAKR-ESETVEAGIERVLRRSRRLLNTPTVNAEGDQTTEGLPDEDDDEQYSSVDGYKKKHLSKYLSEYEVDERHEKDARAYALRNAGNQARVSVVGTASYQHTLMRVRTMSDSGLANRIKAIERAKGKHAVVKMRLFARVLFLEGNESLADDATAALRRLIEELGDPDE 237          
BLAST of mRNA_C-linearis_contig90.16763.1 vs. uniprot
Match: A0A7S2WS01_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WS01_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 6.000e-10
Identity = 38/75 (50.67%), Postives = 49/75 (65.33%), Query Frame = 0
Query:  175 GTASYQHCLHRVRTMSDAQLARRVRTIERARGAKAKEKILVFSNVLRARGKTDLLEMAEAALDRLVRGVPMPEQG 249
            GTASYQH LHRVRTM +A LARR++ IERA G  A  K+ +F+ VL   G  +L   A A+L RL+  +  P +G
Sbjct:  131 GTASYQHTLHRVRTMDEAALARRIKAIERAAGQHAVVKMRLFARVLCLEGHDELASDATASLQRLIELLGDPGEG 205          
BLAST of mRNA_C-linearis_contig90.16763.1 vs. uniprot
Match: B7GD44_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GD44_PHATC)

HSP 1 Score: 67.4 bits (163), Expect = 1.040e-9
Identity = 69/229 (30.13%), Postives = 106/229 (46.29%), Query Frame = 0
Query:   46 TISQYELQRLERIKRNNAFIASLSLGSPNKAPSPQST--KRRPPA------------------------KRQRSSKPRRVPSRTSRRLKGESIDPDDFVALPGTWIGSLAIATSKPGTAPPSFRRDYGPELNAEEAEKRMEVLKEQIDERDDARAGTASYQHCLHRVRTMSDAQLARRVRTIERARGAKAKEKILVFSNVLRARGKTDLLEMAEAALDRLVRGVPMPEQ 248
            ++S+YE+ R   I+RNN+ + SL L S N+         KRRP                          +++R ++    P R+S RLKG  ++PD   A   + +    I +    T     RR    E   +E +K   +  +    +      TA+Y+HCL RVRTM++  LA RV+ IERA G     K+ +F + L+  GK DL  +A  AL+RL   +P P +
Sbjct:   23 SLSEYEVIRARNIERNNSRLRSLGLISANEQQESNDAAWKRRPHIPDEAILAETEQLREDEDFKTSSDNRKRRRTQEGPFPYRSSMRLKG--LEPDGGTANITSEL--TLIKSQSVSTIEVKERRRILIEECRKERQKAALIFAQLGIAQAAKENPTATYEHCLMRVRTMTEKALANRVKAIERAAGKHCVVKMAIFKSCLQDEGKWDLAALARDALERLKAMLPPPTE 247          
BLAST of mRNA_C-linearis_contig90.16763.1 vs. uniprot
Match: A0A7S1B9Z9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9Z9_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.120e-9
Identity = 69/227 (30.40%), Postives = 98/227 (43.17%), Query Frame = 0
Query:   46 TISQYELQRLERIKRNNAFIASLSLGSPN----------------------KAPSPQSTKRRPPAKRQRSSKPRRVPSRTSRRLKGESIDPDDFVALPGTWIGSLAIATSKPGTAPPSFRRDYGPELNAEEAEKRMEVLKEQIDERDDARA---GTASYQHCLHRVRTMSDAQLARRVRTIERARGAKAKEKILVFSNVLRARGKTDLLEMAEAALDRLVRGVPMPE 247
            T S YE QR   I+RNNA +  L L +P                       K     S K  P  +++  +     P+R SRRL+G S    D          +  +      T  P  +     E +AE  + R+       +   DA A    TASY+HCL RVRTM++  L  R++ IERA G     K+ +F + L   G  +L E A +AL+RL   +P+PE
Sbjct:   12 TFSDYEHQRATNIERNNARLRLLGLITPEEESISNDLAWGKSVTKSLVSQRKLDDTNSKKATPRKRKKGETIEETAPTRKSRRLQGISASKSD---------SNEEMQVCDHYTPLPHRQLQTREEQSAERRKARLRAAALVAEAGADAAAMENPTASYEHCLMRVRTMTEKGLGNRIKAIERAAGRHCVVKMAIFRSCLLDEGYDELAEDAGSALERLKGLLPVPE 229          
BLAST of mRNA_C-linearis_contig90.16763.1 vs. uniprot
Match: A0A7S4SJE8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SJE8_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.110e-8
Identity = 65/212 (30.66%), Postives = 98/212 (46.23%), Query Frame = 0
Query:   47 ISQYELQRLERIKRNNAFIASLSLGSPNKAPSPQSTKRR-------PPAKRQRSSKPRRVPSRTSRRLKGESIDPDDFVALPGTWIGSLAIATSKPGTAPPSFRRDYGPELNAEEAEKRMEVLKEQID---ERDDARAGTASYQHCLHRVRTMSDAQLARRVRTIERARGAKAKEKILVFSNVLRARGKTDLLEMAEAALDRLVRGVPMPEQ 248
            +S+YE  R   I+RNNA + SL L S  +     +T  R       P  KR++       P+R S RL+G        + +PG     +  +  +        R +   E      E R+   K   D   E+      TA+Y+HCL RVRTM++  L  RVR IERA G     K+ +F + L+  G  +L ++A  AL+RL +G+  P +
Sbjct:   38 MSEYERLRARNIERNNARLRSLGLLSAREEIDSNATAWRKIEVAAAPYKKRKKRDDTSTEPARKSLRLQG--------IRVPGEEKEDMLESKEERQERVQKQREEIVKECR----ETRLRAAKAVADAGAEKAGKENPTATYEHCLMRVRTMTEKGLVNRVRAIERAAGKHCVVKMAIFKSCLQDEGMWELAQVAADALERL-KGLQAPPE 236          
BLAST of mRNA_C-linearis_contig90.16763.1 vs. uniprot
Match: C1N1R7_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N1R7_MICPC)

HSP 1 Score: 61.2 bits (147), Expect = 1.590e-7
Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 0
Query:  175 GTASYQHCLHRVRTMSDAQLARRVRTIERARGAKAKEKILVFSNVLRARGKTDLLEMAEAALDRLVRGVPMPE 247
            GTASYQH L RVRTM +  L RRV+ IERA+G  A  K+ +F+ VL   G   L E A A+L RL+  +  PE
Sbjct:  148 GTASYQHTLMRVRTMDEGGLRRRVKAIERAKGKHAVVKMRLFARVLFLEGHDALSEDAAASLSRLIAELGDPE 220          
BLAST of mRNA_C-linearis_contig90.16763.1 vs. uniprot
Match: A0A7S3V986_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V986_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.630e-7
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 0
Query:  176 TASYQHCLHRVRTMSDAQLARRVRTIERARGAKAKEKILVFSNVLRARGKTDLLEMAEAALDRLVRGVPMP 246
            TA+Y+HCLHRVR+M+D  LA RV+ IERA G     K+ +F + L+     +L E++  AL+RL    P+P
Sbjct:  182 TATYEHCLHRVRSMTDKGLANRVKAIERAAGKHCVVKMAIFKSCLQDENMWELAELSSNALERLKALKPIP 252          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7FTC8_ECTSI4.600e-8463.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J5XV63_DIALT1.070e-1032.84Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
C1FFT4_MICCC1.140e-1031.11Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
A0A7S0D6P6_MICPS2.900e-1029.33Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
A0A7S2WS01_9STRA6.000e-1050.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B7GD44_PHATC1.040e-930.13Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1B9Z9_9STRA1.120e-930.40Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S4SJE8_9STRA2.110e-830.66Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
C1N1R7_MICPC1.590e-750.68Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S3V986_9STRA1.630e-745.07Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 152..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:187559..191023 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16763.1mRNA_C-linearis_contig90.16763.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig90 186921..191084 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig90.16763.1 ID=prot_C-linearis_contig90.16763.1|Name=mRNA_C-linearis_contig90.16763.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=251bp
MVATVMTERAARRTTKVSGLLPTMGRKCEREGEEEEDEEDVEESNTISQY
ELQRLERIKRNNAFIASLSLGSPNKAPSPQSTKRRPPAKRQRSSKPRRVP
SRTSRRLKGESIDPDDFVALPGTWIGSLAIATSKPGTAPPSFRRDYGPEL
NAEEAEKRMEVLKEQIDERDDARAGTASYQHCLHRVRTMSDAQLARRVRT
IERARGAKAKEKILVFSNVLRARGKTDLLEMAEAALDRLVRGVPMPEQGS
*
back to top