prot_C-linearis_contig9.16732.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16732.1
Unique Nameprot_C-linearis_contig9.16732.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1079
Homology
BLAST of mRNA_C-linearis_contig9.16732.1 vs. uniprot
Match: D7FR13_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR13_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 1.420e-106
Identity = 432/937 (46.10%), Postives = 486/937 (51.87%), Query Frame = 0
Query:  164 MAKAGYMPFDNEDRLGIFDTKRGGFGQQASPAAEDDWRGGGQQ-----------------------HSPAGSGVSIAPAAAASGLRAWPSTYSSEI-----------DEVWTRQA--EGGGQ---QGLRQ--VSDGGNQQKRPGSASVSGPSKRLHEMKEYFRRSQ-RAPSSG--GHGQHDDAHDSGHGGH---------SELKHEYDRDHNPHRYPYFEGSASAAVFRPRGGGSXXXXXXXXXXSVNVLPGLTGDMSYDGLRREGSANGISIGSQDQGNGGVGVGEVGDGGATGGIGASNGGGVYGKNDQQQQQRSNIMPWQHDMISGNGYSPSSVSHHQGGSSGSNPTTDVLPPVSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDSGDVGSVEFDPQADCRPSVIGSHHNSHANVTVSA---GGGSPTSWWRDAPEPAASNFPWDLQLPNPAPPLALSSH---TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLXXXXXXXXXXXXXXXXXXGEAMDH--------LRFGKPSPASLAGLGPAPSLGGGSHRHRGGAAEHLSQPGSVVDILENGGNGGMRSGG-----------TTILLEAVGRESYCSGGXXXGLGRWGSNASPPSATEIAWGLGSSRNGSXXXXXXXXE---NYMSAR-KLEESCRRMQQAPPCDSLVPPATHASAYNVVPVNPRSLLHAGPFGGG-------SDRYGAHEFKTLSMASGDPEGVVFGRAGGGGDGGG---RGEMSRAKRARVIKREMDSMHLSPSGSGAGLSSEEAAFGRLMERNSGXXXXXX----RSRGVAGSVGHGGHASVRDAAGSWGGGESGRSRDGGXXXXXXSGSI-------RAPNRQKKASASSRRCRDENCNSHPNFGIEGDRKAVYCAKHKLPGMVNVKAP 997
            MAKAGY+PFD  DRL IF  KRG  G      + D   GG                          HSP GSGVS+AP    +GL  WP  Y SEI           D  W RQ   E GG    Q  RQ  +  GG Q+KRPGSASVSGPS+RLHEMKEYFRR++  AP  G  GH QH D H  G             + LK E++  H+ HRYP+FEG     VFR RG G XXXXXXXX X                                                                      R N +PWQH+MI+ NGYSPS           S   TD LP                          XXXXXXXXXXXXXX     VGSVEFDPQADCR  V+  HH+      VS     GGSPTSWWRDAPEP  S FPWDLQLPNPAPPLALSSH   +G     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXX    DH         RFGKPS +SLAGLGPAP +GGG  RH                                         + +LL+AVGR  Y +G       RWG  +SPPS TE+ WGL  SRNG XXXXXXXX    +++SAR KLE+S  R   APPCD+LVPP  HA AY++ P NPRSLL  G  G         SDR+ AH+FK +SMA G+ +G +FG +           R +M RAKRARV+KRE D +HLS +G   G++  ++ F RLMER  G          RSR V   V H   A +RD AGSWGG          XXXXXX           R   R KK+ A+SRRCR E C SHPNFGIEGDR+AVYCAKHKLPGMVNVKAP
Sbjct:    1 MAKAGYVPFDT-DRLEIFANKRGVNGM----GSFDQHPGGXXXXXXXXXXXXXXXXXXXXXXXXXXHSP-GSGVSVAP----TGLD-WPGGYGSEIGDPAGTAATAADMSWARQQHQEAGGAVHPQDFRQEGIGGGGGQRKRPGSASVSGPSQRLHEMKEYFRRNRLAAPLDGPHGHAQHMDDHAGGGXXXXXXXXXXXPANLKQEHE--HDQHRYPFFEGDVPH-VFRARGSGXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXRGNSIPWQHEMIAVNGYSPSXXXXXXXXXXXSEGATDNLP-----AGVGMASMQNGGSNGHNDVGGXXXXXXXXXXXXXXXXXXXVGSVEFDPQADCRAPVVDPHHHQXXXXQVSVTSTAGGSPTSWWRDAPEPVVSTFPWDLQLPNPAPPLALSSHNVGSGGGLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHPPLNNWDACRFGKPSASSLAGLGPAPDIGGGQ-RHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAMLLDAVGRGPYGAGA------RWGPGSSPPSVTEVVWGLSGSRNGXXXXXXXXXXXXXSFLSARNKLEDS--RRGTAPPCDTLVPPGPHAPAYDI-PNNPRSLLGMGSAGXXXXXXXXXSDRFVAHDFKPVSMAPGETDGAMFGGSXXXXXXXXXXXRDDMPRAKRARVMKREADGIHLSSNG--GGMAGGDSVFERLMERGRGGELGGGGAGGRSRAVINGVDH---APLRDGAGSWGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRTTARGKKSPATSRRCRHEGCQSHPNFGIEGDRRAVYCAKHKLPGMVNVKAP 896          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR13_ECTSI1.420e-10646.10EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR13... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3525799..3531924 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16732.1mRNA_C-linearis_contig9.16732.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3523702..3531956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16732.1 ID=prot_C-linearis_contig9.16732.1|Name=mRNA_C-linearis_contig9.16732.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1079bp
MTTVTLPKDTGSGKAHNKKTRAEQRKTTSTRAQEQGDNCPSPSWAPQATT
DPQQQQQGKDHLFFLRASQREKQRIPAEEQPFTVESNGSSGGSGGDLPSW
WGSKARAAAAAAAARCPSSPFQSNGGAFQQQQEPARWSESPATAAGGAGG
GGATYNNNNSRQMMAKAGYMPFDNEDRLGIFDTKRGGFGQQASPAAEDDW
RGGGQQHSPAGSGVSIAPAAAASGLRAWPSTYSSEIDEVWTRQAEGGGQQ
GLRQVSDGGNQQKRPGSASVSGPSKRLHEMKEYFRRSQRAPSSGGHGQHD
DAHDSGHGGHSELKHEYDRDHNPHRYPYFEGSASAAVFRPRGGGSGGGSG
GGGGGSVNVLPGLTGDMSYDGLRREGSANGISIGSQDQGNGGVGVGEVGD
GGATGGIGASNGGGVYGKNDQQQQQRSNIMPWQHDMISGNGYSPSSVSHH
QGGSSGSNPTTDVLPPVSIGGSLQNGGGGGGNHNISNDGEDNGSSSIVEG
GGGGGTDSGDVGSVEFDPQADCRPSVIGSHHNSHANVTVSAGGGSPTSWW
RDAPEPAASNFPWDLQLPNPAPPLALSSHTGGGGGSGGGGLQESALGGGG
GVGGGRGGGSGGGGGPPASLMGGGSAVMSTIRGGGGSGGEAMDHLRFGKP
SPASLAGLGPAPSLGGGSHRHRGGAAEHLSQPGSVVDILENGGNGGMRSG
GTTILLEAVGRESYCSGGGGGGLGRWGSNASPPSATEIAWGLGSSRNGSG
GGGGGAAENYMSARKLEESCRRMQQAPPCDSLVPPATHASAYNVVPVNPR
SLLHAGPFGGGSDRYGAHEFKTLSMASGDPEGVVFGRAGGGGDGGGRGEM
SRAKRARVIKREMDSMHLSPSGSGAGLSSEEAAFGRLMERNSGGGGGGGR
SRGVAGSVGHGGHASVRDAAGSWGGGESGRSRDGGGGGSSSSGSIRAPNR
QKKASASSRRCRDENCNSHPNFGIEGDRKAVYCAKHKLPGMVNVKAPRCR
EPRCTRNPVYGNTGDPRATFCLSHKSPMMVDVKNRCCEHPGCKHQPSFGL
VGDRRANFCFAHKLPTHVNIRRARARAS*
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