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Homology
BLAST of mRNA_C-linearis_contig9.16732.1 vs. uniprot
Match: D7FR13_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR13_ECTSI) HSP 1 Score: 366 bits (939), Expect = 2.980e-103 Identity = 432/937 (46.10%), Postives = 486/937 (51.87%), Query Frame = 3
Query: 522 MAKAGYMPFDNEDRLGIFDTKRGGFGQQASPAAEDDWRGGGQQ-----------------------HSPAGSGVSIAPAAAASGLRAWPSTYSSEI-----------DEVWTRQA--EGGGQ---QGLRQ--VSDGGNQQKRPGSASVSGPSKRLHEMKEYFRRSQ-RAPSSG--GHGQHDDAHDSGHGGH---------SELKHEYDRDHNPHRYPYFEGSASAAVFRPRGGGSXXXXXXXXXXSVNVLPGLTGDMSYDGLRREGSANGISIGSQDQGNGGVGVGEVGDGGATGGIGASNGGGVYGKNDQQQQQRSNIMPWQHDMISGNGYSPSSVSHHQGGSSGSNPTTDVLPPVSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDSGDVGSVEFDPQADCRPSVIGSHHNSHANVTVSA---GGGSPTSWWRDAPEPAASNFPWDLQLPNPAPPLALSSH---TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLXXXXXXXXXXXXXXXXXXGEAMDH--------LRFGKPSPASLAGLGPAPSLGGGSHRHRGGAAEHLSQPGSVVDILENGGNGGMRSGG-----------TTILLEAVGRESYCSGGXXXGLGRWGSNASPPSATEIAWGLGSSRNGSXXXXXXXXE---NYMSAR-KLEESCRRMQQAPPCDSLVPPATHASAYNVVPVNPRSLLHAGPFGGG-------SDRYGAHEFKTLSMASGDPEGVVFGRAGGGGDGGG---RGEMSRAKRARVIKREMDSMHLSPSGSGAGLSSEEAAFGRLMERNSGXXXXXX----RSRGVAGSVGHGGHASVRDAAGSWGGGESGRSRDGGXXXXXXSGSI-------RAPNRQKKASASSRRCRDENCNSHPNFGIEGDRKAVYCAKHKLPGMVNVKAP 3023
MAKAGY+PFD DRL IF KRG G + D GG HSP GSGVS+AP +GL WP Y SEI D W RQ E GG Q RQ + GG Q+KRPGSASVSGPS+RLHEMKEYFRR++ AP G GH QH D H G + LK E++ H+ HRYP+FEG VFR RG G XXXXXXXX X R N +PWQH+MI+ NGYSPS S TD LP XXXXXXXXXXXXXX VGSVEFDPQADCR V+ HH+ VS GGSPTSWWRDAPEP S FPWDLQLPNPAPPLALSSH +G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX DH RFGKPS +SLAGLGPAP +GGG RH + +LL+AVGR Y +G RWG +SPPS TE+ WGL SRNG XXXXXXXX +++SAR KLE+S R APPCD+LVPP HA AY++ P NPRSLL G G SDR+ AH+FK +SMA G+ +G +FG + R +M RAKRARV+KRE D +HLS +G G++ ++ F RLMER G RSR V V H A +RD AGSWGG XXXXXX R R KK+ A+SRRCR E C SHPNFGIEGDR+AVYCAKHKLPGMVNVKAP
Sbjct: 1 MAKAGYVPFDT-DRLEIFANKRGVNGM----GSFDQHPGGXXXXXXXXXXXXXXXXXXXXXXXXXXHSP-GSGVSVAP----TGLD-WPGGYGSEIGDPAGTAATAADMSWARQQHQEAGGAVHPQDFRQEGIGGGGGQRKRPGSASVSGPSQRLHEMKEYFRRNRLAAPLDGPHGHAQHMDDHAGGGXXXXXXXXXXXPANLKQEHE--HDQHRYPFFEGDVPH-VFRARGSGXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXRGNSIPWQHEMIAVNGYSPSXXXXXXXXXXXSEGATDNLP-----AGVGMASMQNGGSNGHNDVGGXXXXXXXXXXXXXXXXXXXVGSVEFDPQADCRAPVVDPHHHQXXXXQVSVTSTAGGSPTSWWRDAPEPVVSTFPWDLQLPNPAPPLALSSHNVGSGGGLHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHPPLNNWDACRFGKPSASSLAGLGPAPDIGGGQ-RHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAMLLDAVGRGPYGAGA------RWGPGSSPPSVTEVVWGLSGSRNGXXXXXXXXXXXXXSFLSARNKLEDS--RRGTAPPCDTLVPPGPHAPAYDI-PNNPRSLLGMGSAGXXXXXXXXXSDRFVAHDFKPVSMAPGETDGAMFGGSXXXXXXXXXXXRDDMPRAKRARVMKREADGIHLSSNG--GGMAGGDSVFERLMERGRGGELGGGGAGGRSRAVINGVDH---APLRDGAGSWGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRTTARGKKSPATSRRCRHEGCQSHPNFGIEGDRRAVYCAKHKLPGMVNVKAP 896
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | EsV-1-7 domain protein |
| Ec32 ortholog | Ec-09_002940.1 |
| Exons | 4 |
| Model size | 5366 |
| Cds size | 3237 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930763.2159595-UTR-C-linearis_contig9:3523701..3525798 | 1622930763.2159595-UTR-C-linearis_contig9:3523701..3525798 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig9 3523702..3525798 - |
| 1690881236.9653008-UTR-C-linearis_contig9:3523701..3525798 | 1690881236.9653008-UTR-C-linearis_contig9:3523701..3525798 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig9 3523702..3525798 - |
| 1622930763.3084009-UTR-C-linearis_contig9:3531924..3531956 | 1622930763.3084009-UTR-C-linearis_contig9:3531924..3531956 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig9 3531925..3531956 - |
| 1690881237.0180988-UTR-C-linearis_contig9:3531924..3531956 | 1690881237.0180988-UTR-C-linearis_contig9:3531924..3531956 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig9 3531925..3531956 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930763.2333653-CDS-C-linearis_contig9:3525798..3526036 | 1622930763.2333653-CDS-C-linearis_contig9:3525798..3526036 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig9 3525799..3526036 - |
| 1690881236.9768937-CDS-C-linearis_contig9:3525798..3526036 | 1690881236.9768937-CDS-C-linearis_contig9:3525798..3526036 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig9 3525799..3526036 - |
| 1622930763.2522726-CDS-C-linearis_contig9:3526333..3526439 | 1622930763.2522726-CDS-C-linearis_contig9:3526333..3526439 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig9 3526334..3526439 - |
| 1690881236.987056-CDS-C-linearis_contig9:3526333..3526439 | 1690881236.987056-CDS-C-linearis_contig9:3526333..3526439 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig9 3526334..3526439 - |
| 1622930763.2691987-CDS-C-linearis_contig9:3526773..3528904 | 1622930763.2691987-CDS-C-linearis_contig9:3526773..3528904 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig9 3526774..3528904 - |
| 1690881236.9966419-CDS-C-linearis_contig9:3526773..3528904 | 1690881236.9966419-CDS-C-linearis_contig9:3526773..3528904 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig9 3526774..3528904 - |
| 1622930763.2881267-CDS-C-linearis_contig9:3531162..3531924 | 1622930763.2881267-CDS-C-linearis_contig9:3531162..3531924 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig9 3531163..3531924 - |
| 1690881237.0088515-CDS-C-linearis_contig9:3531162..3531924 | 1690881237.0088515-CDS-C-linearis_contig9:3531162..3531924 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig9 3531163..3531924 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig9.16732.1 >prot_C-linearis_contig9.16732.1 ID=prot_C-linearis_contig9.16732.1|Name=mRNA_C-linearis_contig9.16732.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1079bp
MTTVTLPKDTGSGKAHNKKTRAEQRKTTSTRAQEQGDNCPSPSWAPQATT
DPQQQQQGKDHLFFLRASQREKQRIPAEEQPFTVESNGSSGGSGGDLPSW
WGSKARAAAAAAAARCPSSPFQSNGGAFQQQQEPARWSESPATAAGGAGG
GGATYNNNNSRQMMAKAGYMPFDNEDRLGIFDTKRGGFGQQASPAAEDDW
RGGGQQHSPAGSGVSIAPAAAASGLRAWPSTYSSEIDEVWTRQAEGGGQQ
GLRQVSDGGNQQKRPGSASVSGPSKRLHEMKEYFRRSQRAPSSGGHGQHD
DAHDSGHGGHSELKHEYDRDHNPHRYPYFEGSASAAVFRPRGGGSGGGSG
GGGGGSVNVLPGLTGDMSYDGLRREGSANGISIGSQDQGNGGVGVGEVGD
GGATGGIGASNGGGVYGKNDQQQQQRSNIMPWQHDMISGNGYSPSSVSHH
QGGSSGSNPTTDVLPPVSIGGSLQNGGGGGGNHNISNDGEDNGSSSIVEG
GGGGGTDSGDVGSVEFDPQADCRPSVIGSHHNSHANVTVSAGGGSPTSWW
RDAPEPAASNFPWDLQLPNPAPPLALSSHTGGGGGSGGGGLQESALGGGG
GVGGGRGGGSGGGGGPPASLMGGGSAVMSTIRGGGGSGGEAMDHLRFGKP
SPASLAGLGPAPSLGGGSHRHRGGAAEHLSQPGSVVDILENGGNGGMRSG
GTTILLEAVGRESYCSGGGGGGLGRWGSNASPPSATEIAWGLGSSRNGSG
GGGGGAAENYMSARKLEESCRRMQQAPPCDSLVPPATHASAYNVVPVNPR
SLLHAGPFGGGSDRYGAHEFKTLSMASGDPEGVVFGRAGGGGDGGGRGEM
SRAKRARVIKREMDSMHLSPSGSGAGLSSEEAAFGRLMERNSGGGGGGGR
SRGVAGSVGHGGHASVRDAAGSWGGGESGRSRDGGGGGSSSSGSIRAPNR
QKKASASSRRCRDENCNSHPNFGIEGDRKAVYCAKHKLPGMVNVKAPRCR
EPRCTRNPVYGNTGDPRATFCLSHKSPMMVDVKNRCCEHPGCKHQPSFGL
VGDRRANFCFAHKLPTHVNIRRARARAS* back to topmRNA from alignment at C-linearis_contig9:3523702..3531956- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig9.16732.1 ID=mRNA_C-linearis_contig9.16732.1|Name=mRNA_C-linearis_contig9.16732.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8255bp|location=Sequence derived from alignment at C-linearis_contig9:3523702..3531956- (Chordaria linearis ClinC8C monoicous)
CCTCCCCCCATCCCTCTCTCCCTGTCTCTCTCATGACGACAGTGACTCTT
CCAAAAGACACAGGCAGCGGCAAGGCACACAACAAGAAGACCAGGGCGGA
ACAACGCAAGACAACCTCGACCAGGGCGCAAGAGCAGGGGGACAACTGCC
CGAGTCCCAGCTGGGCGCCACAGGCCACAACGGATCCACAGCAGCAGCAG
CAGGGGAAGGATCACCTTTTTTTCCTTCGGGCGAGCCAGCGCGAGAAGCA
GCGGATACCCGCAGAGGAACAACCATTCACCGTGGAGAGCAACGGCAGCA
GCGGCGGCAGCGGCGGTGACCTGCCCTCGTGGTGGGGAAGCAAGGCGAGA
GCGGCGGCGGCGGCGGCGGCAGCGCGGTGCCCGTCCTCTCCCTTCCAGAG
CAACGGAGGGGCTTTTCAGCAGCAGCAGGAACCCGCGCGGTGGTCGGAGA
GTCCAGCAACCGCGGCAGGAGGAGCAGGCGGAGGAGGCGCCACCTACAAC
AACAACAACAGCCGCCAGATGATGGCCAAGGCTGGATACATGCCGTTCGA
CAACGAAGATCGACTGGGGATCTTCGACACCAAGCGGGGCGGCTTCGGCC
AGCAGGCCAGCCCTGCGGCCGAGGACGACTGGAGAGGTGGGGGGCAGCAG
CACTCCCCCGCGGGAAGCGGGGTGTCGATTGCACCCGCTGCGGCTGCCTC
TGGATTGCGCGCCTGGCCCTCCACCTACTCCAGCGAGATTGACGAGGTGT
GGACGAGGCAAGCGGAGGGAGGAGGACAGCAAGGTCTCCGTCAGGTGTGT
GTGCGCATGCTATGTGCGGGGGCGGGTGGGGAGAGGGGGGGTTGTGGATC
CATCTTGTCTTGGAGCTTTTTTTCTCCTCTTTTCTCCATTTCTTCATGAG
CGCTCTCCGTCTCGCAGCCAGCCCTCTTTATTGTTTTTCTTGCTTCCTAT
TTTTCATCTTTGCATCTGTCTTGATTGCCAACCACGGGTGTTGGAATTTA
ATGCAAAACAAAGGATTCAACCCCGCCTCCCCGCACACACCTCGCTGTAA
CTGCCAACCTTTTTACTCCGTATAATTTTTGGCAAGAACAGCTTCTTCTT
GTTTGCTGTTGCTGGATGAGCTCTTTGGTGCTGGTGTAGCGGATCTTGCC
CCCACACATATCTTCGAGCAAAAAACAAAAAACAAAAAAAAGAGCAGCTG
CTCTGTCCGCACAAACTCTTGTCTATCCACACAACCTCTCTATCTCCTTT
CACGCTGGCGGCAGCAACAGTTAGCACGACCTCGTACACGATGCGAGCAC
ACCAGCGCCATCTGTCTCAAAAGCGTAACCATCCCCAAAGGTCTAGACTA
TGATGTGAGTTTTTTTGTTTTTGGTTTTTTACCCCTTTCCTTAGACTCCC
ATCTTTATTTCCACGACAACTTGCCGCTTTCAATCGCACAAACCTGCGCG
TCCAGGGTGTTTTTTTACCCGCCGTTCTGTTCCAGGTGTTGTTGTCGACG
TTTTTTACTGCTGTGACGCAACATGTCAACATGTCGAGAGGTGTAGATTG
TCGCGCACCTGCGGCCGGTACTGCTCTGCAATGTGGGGAGCACCAACACC
CTTGCCGCCGGATCCTTCCGATTTTGACTTTTTTTCAAAGGTTTGGGAGT
GAAGGTTGTGAGCAAGAAAAAATTGAAAAAATGCATACAAAAGTTTCGCC
TCTCAACGGCCTTCCTTCCATGGTTTTGACACCCCAGGGAAATGGGTGGG
GACAGGTATACATGCGTGCACACAGGCGGTGAGCTACACAGAAAGATCGC
ACGCCATGCCCTCATGCGAGGCGCCGAGAAAGTTTGCTTTATTTCGACTA
AAAGCGGTGGTCTTGCCTCATACACAACCACAAAAATCTTGTCTCCTTTC
CCAGGCTCTCTGTGTGCCTCTGCTCTTGCCAGAAAAATCACGCTCCCCAT
CAGACACCCCACCCCCCCTTCCCTATCTGACTCAAAAAGGTTGATTTGGT
TGTGGATCCAGCTGCAGAATATCAAAGTTCAAGCGCGCCGGGTGCTACTG
CCGTGCTACTGTACCGCCACAAATCTCTTTCTGTGCCATCAAGTTGTCGA
GAAAAAAAAAAGTGCGATGTGGTTGCATGGTTATCCCGTGGGCGTGGTGT
TGTGCGCCCCGGGGTATGTTCCTCTCTTTGTCAAAATCTGAAGGGGGGTA
CAGAGTATGGAAAACCAAACATATGGACTCGTGAATTGTAGTCTATTGTT
TGTATTGCTGAGCAGTGACAACAAAACCAGGCTGCGCCGCCCCTACACCG
CCATGTGGCCGATGTTGACAAATGTTTCGTGGGTCCTACAACATACTTGG
ATGAAGTATGAGTTCCGCACCGAATTTATTCCATTCTTCCCATCGCCTGC
TGTTTGTCTCGAAGAAAGAAGCGTGCGGTACGCATCTATCATACTTGCTG
GGAACGCACACAACACACAACTCGAGACAAAAACGTTTTTCTTGATTTAC
TTTTTATTTTATTTTCTGTAAATATCATGCAGGAGAGAACAAAAACCTTA
ACCCGTGTTGCATGGCTGCCTGCCGACAGCTTCGGTTCTTTCCATGCCTG
CTGTTGTATACCTAGCCCCATGAATCGGAGGCAGTTGTATGGCTGTGCCT
ATCGCCGCTTGCCGGTGCGGTTGTAGCGCCGTTGCAACTGGAACCGGCCC
ACCGGCCCGGATTTTCCGTTGCTTGAAAAAACGTCAAGATCGTGCACAAC
ACTCGCCTGCGCGCCGTGATTGGTGGCCTCGTGCGCGCTCGCGTGTACCC
TTCTCAGAAGTGTGGAGCGACCGTTGTCCAAAGCGGAGGGAGCACTCACT
GCAACCTCCATGTTTGTTATTCCGGTTGGTCATCCCATCTTGGCAAGCTC
AACACCTGAAGGGTGGACTTTGTTTTATGAGAATCGAGAGCAATGTTAAC
ACCACTTCGCCGCTCGCTCTCACCCCCCTCCTTGCGCGCCCCCCCCCTCA
AACAATCCAACACTCGGAACTTGCGAACGGGGATCAAACACAACATCTTC
AGGTCAGCGACGGGGGAAATCAGCAGAAGCGGCCGGGATCGGCGTCCGTC
AGCGGCCCGTCGAAGCGCCTGCACGAGATGAAGGAGTACTTCCGCCGTAG
CCAGCGGGCACCGAGCAGCGGCGGGCACGGGCAGCACGACGACGCCCACG
ACAGCGGCCACGGCGGCCACTCGGAGCTCAAGCACGAGTACGACCGCGAC
CATAACCCGCATCGCTACCCGTATTTCGAGGGCAGCGCGTCCGCCGCCGT
TTTCCGTCCCCGTGGCGGCGGCAGCGGCGGCGGCAGCGGCGGCGGCGGCG
GTGGCAGCGTGAACGTCTTGCCGGGACTCACCGGCGACATGAGCTACGAC
GGCCTCCGTAGAGAGGGCAGCGCGAACGGCATCAGCATCGGCTCCCAAGA
TCAAGGCAACGGCGGCGTGGGCGTGGGCGAGGTCGGGGACGGCGGCGCTA
CCGGAGGAATCGGCGCCAGCAACGGCGGCGGCGTCTACGGCAAGAACGAC
CAGCAGCAGCAGCAGCGCAGCAACATCATGCCCTGGCAGCACGATATGAT
CAGCGGGAACGGCTACTCCCCCTCTTCGGTGAGCCACCACCAGGGCGGCA
GCTCCGGCTCCAACCCGACGACTGACGTCCTGCCCCCGGTGTCCATCGGC
GGCAGCCTGCAGAACGGCGGCGGCGGCGGCGGCAACCACAACATCAGCAA
CGACGGCGAAGACAACGGCAGCAGCAGCATCGTCGAAGGAGGCGGCGGAG
GAGGCACCGACTCCGGAGACGTCGGCAGCGTGGAGTTCGACCCCCAGGCC
GACTGCAGACCTTCGGTGATCGGCTCCCACCACAACAGCCACGCGAACGT
GACGGTGTCCGCGGGCGGGGGAAGCCCGACGTCGTGGTGGCGGGACGCCC
CCGAGCCGGCCGCGTCCAACTTCCCGTGGGACCTCCAGCTGCCGAACCCG
GCGCCACCGCTGGCTCTGTCGTCGCACACGGGCGGCGGAGGCGGCAGCGG
CGGCGGCGGTCTCCAGGAGTCGGCGCTCGGCGGCGGCGGCGGCGTCGGGG
GTGGGAGGGGCGGCGGCAGCGGCGGCGGCGGCGGCCCTCCGGCGTCCTTG
ATGGGCGGCGGCAGCGCGGTGATGTCGACAATTCGTGGTGGCGGTGGCAG
CGGGGGCGAGGCGATGGACCACCTCAGGTTCGGCAAGCCGTCCCCCGCTT
CCCTAGCCGGCCTCGGGCCGGCCCCCAGCCTTGGAGGCGGCAGCCACCGC
CACCGCGGCGGCGCGGCCGAGCACCTGAGCCAGCCGGGCAGCGTTGTGGA
CATCCTGGAGAACGGCGGCAACGGCGGCATGCGGTCAGGCGGCACCACCA
TCTTGTTGGAGGCCGTCGGGAGGGAGTCCTACTGCAGCGGCGGCGGCGGC
GGGGGCCTAGGCCGCTGGGGCTCAAACGCCTCCCCTCCCTCGGCGACCGA
GATCGCGTGGGGGCTTGGGAGCAGCAGGAACGGCAGCGGTGGCGGCGGCG
GCGGCGCAGCCGAGAACTATATGTCGGCCCGCAAGCTTGAAGAATCGTGC
CGCCGCATGCAGCAGGCCCCGCCCTGCGACTCTCTAGTTCCACCGGCCAC
TCACGCCTCGGCCTACAACGTCGTCCCCGTCAACCCCAGGAGCCTGCTGC
ACGCCGGCCCTTTCGGAGGCGGCTCTGACCGCTACGGGGCGCACGAGTTC
AAGACGCTGTCTATGGCGTCCGGGGACCCCGAGGGGGTGGTTTTCGGCCG
CGCCGGTGGTGGCGGCGACGGCGGTGGCCGCGGTGAAATGTCTCGCGCCA
AGCGCGCTCGGGTGATTAAGCGCGAGATGGATTCGATGCACCTGTCCCCG
AGCGGATCGGGGGCCGGGCTGTCCAGCGAGGAGGCGGCCTTCGGCCGCCT
TATGGAGAGGAACAGCGGGGGCGGCGGGGGCGGGGGCAGGAGCAGGGGCG
TGGCGGGCAGCGTCGGCCACGGCGGCCATGCTTCCGTGCGCGATGCGGCG
GGGTCGTGGGGCGGCGGCGAGAGCGGTCGTAGTAGGGATGGTGGGGGTGG
CGGCAGCAGCAGCAGCGGCAGCATCCGAGCGCCGAACAGACAGAAGAAGG
CGTCGGCCAGCAGCAGGAGGTGCCGCGACGAAAGTGAGTTTTTTTTTTTG
TTTCATGAGTCGGACACGCCATCAACTACAAGCAGAACGTCGAGAGAGGA
AAGGGGCTAGAGCTAGCGTACGATCCGGGATGGCTCCAATTTTTGCCGCG
CCGGCCGTACAACACAGCCTGTGTTTTGTCGTCTTCCACGCGGGAATCGA
AATCGCATCGCCCGAAAAGCGCCATGTAAAGCGCCATGTTTCCCTCCCCT
TGTTGGCAGTGTTCTTTCATCTTTTATCCCGCTGTTGTCATGAATGGCCA
CCCCTCTGTCGCCGCGATACTGAACTTACCTGTCAAAATCTTCACACGCC
GTTGTTGTTTTTCCCAGACTGCAATTCCCACCCGAACTTCGGCATCGAGG
GCGACCGCAAAGCGGTCTACTGCGCCAAGCACAAGCTTCCGGGGATGGTC
AACGTCAAGGCGCCCCGCTGCAGGTTGGGACGATTCACCACTATAAAAGT
ATCCGGCAGCTGTTTTGAGTGTCGCAGAATCGCGACCTTAGCCTATACTT
CCCTCTCGTTTCCCGTCTGCCCCCCCACACCCACACGCGAGTCGAAAGAC
CAAGCGCGTAGCGCCGAAACGTGTACCTACGTACAACACTCGTTTGTTGC
CAAGACAACGCAGAACTCAACCCCCCGTCGTTTCGACATCCACCATTCCT
CTCATAACCACCACCTATTGCCGCTGCTCCGCCTGCGGTGCCCCCTCCAC
CCCCCCGCCCTTCTCCGCAGGGAGCCTAGATGCACCCGCAACCCCGTCTA
CGGAAACACCGGCGACCCCCGCGCCACCTTCTGTCTCTCGCACAAGAGCC
CGATGATGGTGGACGTCAAGAACCGGTGCTGCGAGCACCCGGGCTGCAAG
CACCAGCCGTCCTTTGGCCTGGTGGGCGACCGGCGGGCCAACTTCTGCTT
CGCGCACAAGCTGCCGACGCACGTCAACATCCGCCGCGCAAGGGCCCGGG
CGAGCTGAGCTGGGCTTGGCTTGGCCTGGCGCTGGGCCGAGACAAGAGGG
TGATGATGATGATGGTCACGGTGGAGGTGGTGGTGATGATGATGATGATG
ACGATGATGATGGACCGCGAAATTTTGGATGCGAAATGAGAAGTTTGGTC
GGGTGAATCGGTGGGTGCATGGCGTATCTGTTGTGGTGTAGAGGTCACGC
GCGGATGGCCACAAAGAGTAAAAAGCACGCACCCATGCGCCTTTGCTGCG
CGGGGTAAGAAGAGCCGCAAAACCCGAACTTAACCCCCCCCCCCCCAACC
CTTTTCTTGTGTTCTATTTTGGTTTCTTCCCCGCGGGGGTGGGGTTGGAG
AGTTTTTACCGCGTGATAAAAATCTTGCGATCGCGCCTTCGTCGGCGCGT
GTCTCAAGTAAAAGGTGGCACGCGCGCGCGTGCAGCAACTTTGTATGGTT
TTTATTCCCGCCGCCATTCGTGCGCCGTCTAAATATAAATAGTAGATAGG
CGGCTCATGTTTGATTTGGGGCTCGAGTACAGCGGCGCGGGCCGTCAACC
AGCGGACAACACGCCCGAGGAGACAAAGGTCAGGCGACTTGTTGAGAATG
TGTCATGTACGTGCTATACAGTATGCTTGTGTGCGGAAAGCATGTACGGG
ATGAAGCCGGAGGACATTGTTGTACGTACGTACTTATCCGCGTGTTGGGA
GAGAGGGCGTGGATCATGTGAACTCATGAACTATCATAGTGTAAAGCCGT
GTTTTGTGTTTTCTACATATTTTAGCGCGCCAAGATGGCAGGGGCTTCCG
TTCTGCTTATTTCCAATGTTTTTTTTTTTTTTGAATGAAGTGCGAGTGGG
GTAGAGACCGTGCGCAGCATCGTCAGGCATTATGTTTTTCGTTTTCGAGT
GAAGTTGAAAAAAAAAAAGGCTGGCTATTTAGGCCTTTCGGCCTTTCGGA
CTTTCGTTGTTGTCTTGTGTGTTTGTGTTACGCGCGTGTTGCGACCATTT
CGGATTTCGAGCATTTTTTTTTTTACGGTGTTGGGTAGTTGGGTAAAAAA
AGTAGCGAGAGTGTTATAGTATGACTTGCCATCTGCCCGTGTTAATCCGC
GGGATGCGTGGTTTAGTTTTCTCTGCTTGTCTTGTCTTGTCTTGTCTTGT
CTTCGTGTGGTCTTATCAAATATATTGATGTGTGTTGGTTTCATTTTCGT
TGAGCTCGTCCAAAAATTGTGCAGGAAGCCAATGATGTGAAAGAGCGCTC
GTTCTAATGTATGAAAAAGAGCTGCCGCGCTGGATCGCTTCGATGCTTGT
TTCGTTCCGATCCCCTTGTTTGTTGTTGTAGCTTCACGGCTTTGTTTTTT
GGCGCGGAGTTCGGTGGTTGCCAGTAGGTGTTTCTGCGCCGCATGTGTTT
TGTTCCGGCTGCTTCTTTCCCCTCCCCGTGACGGCAGCTCCTAGGACACT
TTCTGTTGTGTTGAAGCGCAGACCCTCTGTTGCTGTCAAGACGTCATGTA
TAGCCGCATAGCTATGTGTTGGTTTGACGTGGTCTTCTCTCTTCAGAGTG
GGCGCTTCTTGGGCGGGGTTACGGGGATGGATGGGGTTCACAATGGGCTG
GCTGATTGGCAGCTATAATACTACTTTGCTGAATACACGATTTTCTTTGC
GAATTAATTTGTACACATTTCTCTTCTTTAGCGTTTTACACGTGCCAGTG
ATGATATTATTGGGAGGCTGGCTTTTTGTGACCACCGTATCGAATTGAAC
CCCGCCGGCGTGTAGGCGATCGATCGTGCGGGCCGCTTTGTTTTTGGCGT
ATTTTAATTTTTGGTGTTCACGGATTTCAACGTTGATCAGGATCGGGGCC
GCCCGATGACGTTCGAGGGAGTAGTGCGCCATTTGTCGCCCTGCATTGGT
TTCTTTTTTCTCGTGGGCGAGAAGGGCGGAGAAAAAACCTTGGAGGGCGA
GAGGAGCTCGGGGCTGGCGAGCGATGGTTCCGCCGTCCGCTGTCGGGCTT
TGTTTTTGGCTATCGGGGCTTGTTTTGCTGTTTATTTTTTCCACTGGTCG
TGGTGCAGGCAGCCAGGCGGTGGCAGGAGACGATGGGGTTAGCTATTAGG
CGCGC back to topCoding sequence (CDS) from alignment at C-linearis_contig9:3523702..3531956- >mRNA_C-linearis_contig9.16732.1 ID=mRNA_C-linearis_contig9.16732.1|Name=mRNA_C-linearis_contig9.16732.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=6474bp|location=Sequence derived from alignment at C-linearis_contig9:3523702..3531956- (Chordaria linearis ClinC8C monoicous)
ATGACGACAGTGACTCTTCCAAAAGACACAGGCAGCGGCAAGGCACACAA
CAAGAAGACCAGGGCGGAACAACGCAAGACAACCTCGACCAGGGCGCAAG
AGCAGGGGGACAACTGCCCGAGTCCCAGCTGGGCGCCACAGGCCACAACG
GATCCACAGCAGCAGCAGCAGGGGAAGGATCACCTTTTTTTCCTTCGGGC
GAGCCAGCGCGAGAAGCAGCGGATACCCGCAGAGGAACAACCATTCACCG
TGGAGAGCAACGGCAGCAGCGGCGGCAGCGGCGGTGACCTGCCCTCGTGG
TGGGGAAGCAAGGCGAGAGCGGCGGCGGCGGCGGCGGCAGCGCGGTGCCC
GTCCTCTCCCTTCCAGAGCAACGGAGGGGCTTTTCAGCAGCAGCAGGAAC
CCGCGCGGTGGTCGGAGAGTCCAGCAACCGCGGCAGGAGGAGCAGGCGGA
GGAGGCGCCACCTACAACAACAACAACAGCCGCCAGATGATGGCCAAGGC
TGGATACATGCCGTTCGACAACGAAGATCGACTGGGGATCTTCGACACCA
AGCGGGGCGGCTTCGGCCAGCAGGCCAGCCCTGCGGCCGAGGACGACTGG
AGAGGTGGGGGGCAGCAGCACTCCCCCGCGGGAAGCGGGGTGTCGATTGC
ACCCGCTGCGGCTGCCTCTGGATTGCGCGCCTGGCCCTCCACCTACTCCA
GCGAGATTGACGAGGTGTGGACGAGGCAAGCGGAGGGAGGAGGACAGCAA
GGTCTCCGTCAGATGACGACAGTGACTCTTCCAAAAGACACAGGCAGCGG
CAAGGCACACAACAAGAAGACCAGGGCGGAACAACGCAAGACAACCTCGA
CCAGGGCGCAAGAGCAGGGGGACAACTGCCCGAGTCCCAGCTGGGCGCCA
CAGGCCACAACGGATCCACAGCAGCAGCAGCAGGGGAAGGATCACCTTTT
TTTCCTTCGGGCGAGCCAGCGCGAGAAGCAGCGGATACCCGCAGAGGAAC
AACCATTCACCGTGGAGAGCAACGGCAGCAGCGGCGGCAGCGGCGGTGAC
CTGCCCTCGTGGTGGGGAAGCAAGGCGAGAGCGGCGGCGGCGGCGGCGGC
AGCGCGGTGCCCGTCCTCTCCCTTCCAGAGCAACGGAGGGGCTTTTCAGC
AGCAGCAGGAACCCGCGCGGTGGTCGGAGAGTCCAGCAACCGCGGCAGGA
GGAGCAGGCGGAGGAGGCGCCACCTACAACAACAACAACAGCCGCCAGAT
GATGGCCAAGGCTGGATACATGCCGTTCGACAACGAAGATCGACTGGGGA
TCTTCGACACCAAGCGGGGCGGCTTCGGCCAGCAGGCCAGCCCTGCGGCC
GAGGACGACTGGAGAGGTGGGGGGCAGCAGCACTCCCCCGCGGGAAGCGG
GGTGTCGATTGCACCCGCTGCGGCTGCCTCTGGATTGCGCGCCTGGCCCT
CCACCTACTCCAGCGAGATTGACGAGGTGTGGACGAGGCAAGCGGAGGGA
GGAGGACAGCAAGGTCTCCGTCAGGTCAGCGACGGGGGAAATCAGCAGAA
GCGGCCGGGATCGGCGTCCGTCAGCGGCCCGTCGAAGCGCCTGCACGAGA
TGAAGGAGTACTTCCGCCGTAGCCAGCGGGCACCGAGCAGCGGCGGGCAC
GGGCAGCACGACGACGCCCACGACAGCGGCCACGGCGGCCACTCGGAGCT
CAAGCACGAGTACGACCGCGACCATAACCCGCATCGCTACCCGTATTTCG
AGGGCAGCGCGTCCGCCGCCGTTTTCCGTCCCCGTGGCGGCGGCAGCGGC
GGCGGCAGCGGCGGCGGCGGCGGTGGCAGCGTGAACGTCTTGCCGGGACT
CACCGGCGACATGAGCTACGACGGCCTCCGTAGAGAGGGCAGCGCGAACG
GCATCAGCATCGGCTCCCAAGATCAAGGCAACGGCGGCGTGGGCGTGGGC
GAGGTCGGGGACGGCGGCGCTACCGGAGGAATCGGCGCCAGCAACGGCGG
CGGCGTCTACGGCAAGAACGACCAGCAGCAGCAGCAGCGCAGCAACATCA
TGCCCTGGCAGCACGATATGATCAGCGGGAACGGCTACTCCCCCTCTTCG
GTGAGCCACCACCAGGGCGGCAGCTCCGGCTCCAACCCGACGACTGACGT
CCTGCCCCCGGTGTCCATCGGCGGCAGCCTGCAGAACGGCGGCGGCGGCG
GCGGCAACCACAACATCAGCAACGACGGCGAAGACAACGGCAGCAGCAGC
ATCGTCGAAGGAGGCGGCGGAGGAGGCACCGACTCCGGAGACGTCGGCAG
CGTGGAGTTCGACCCCCAGGCCGACTGCAGACCTTCGGTGATCGGCTCCC
ACCACAACAGCCACGCGAACGTGACGGTGTCCGCGGGCGGGGGAAGCCCG
ACGTCGTGGTGGCGGGACGCCCCCGAGCCGGCCGCGTCCAACTTCCCGTG
GGACCTCCAGCTGCCGAACCCGGCGCCACCGCTGGCTCTGTCGTCGCACA
CGGGCGGCGGAGGCGGCAGCGGCGGCGGCGGTCTCCAGGAGTCGGCGCTC
GGCGGCGGCGGCGGCGTCGGGGGTGGGAGGGGCGGCGGCAGCGGCGGCGG
CGGCGGCCCTCCGGCGTCCTTGATGGGCGGCGGCAGCGCGGTGATGTCGA
CAATTCGTGGTGGCGGTGGCAGCGGGGGCGAGGCGATGGACCACCTCAGG
TTCGGCAAGCCGTCCCCCGCTTCCCTAGCCGGCCTCGGGCCGGCCCCCAG
CCTTGGAGGCGGCAGCCACCGCCACCGCGGCGGCGCGGCCGAGCACCTGA
GCCAGCCGGGCAGCGTTGTGGACATCCTGGAGAACGGCGGCAACGGCGGC
ATGCGGTCAGGCGGCACCACCATCTTGTTGGAGGCCGTCGGGAGGGAGTC
CTACTGCAGCGGCGGCGGCGGCGGGGGCCTAGGCCGCTGGGGCTCAAACG
CCTCCCCTCCCTCGGCGACCGAGATCGCGTGGGGGCTTGGGAGCAGCAGG
AACGGCAGCGGTGGCGGCGGCGGCGGCGCAGCCGAGAACTATATGTCGGC
CCGCAAGCTTGAAGAATCGTGCCGCCGCATGCAGCAGGCCCCGCCCTGCG
ACTCTCTAGTTCCACCGGCCACTCACGCCTCGGCCTACAACGTCGTCCCC
GTCAACCCCAGGAGCCTGCTGCACGCCGGCCCTTTCGGAGGCGGCTCTGA
CCGCTACGGGGCGCACGAGTTCAAGACGCTGTCTATGGCGTCCGGGGACC
CCGAGGGGGTGGTTTTCGGCCGCGCCGGTGGTGGCGGCGACGGCGGTGGC
CGCGGTGAAATGTCTCGCGCCAAGCGCGCTCGGGTGATTAAGCGCGAGAT
GGATTCGATGCACCTGTCCCCGAGCGGATCGGGGGCCGGGCTGTCCAGCG
AGGAGGCGGCCTTCGGCCGCCTTATGGAGAGGAACAGCGGGGGCGGCGGG
GGCGGGGGCAGGAGCAGGGGCGTGGCGGGCAGCGTCGGCCACGGCGGCCA
TGCTTCCGTGCGCGATGCGGCGGGGTCGTGGGGCGGCGGCGAGAGCGGTC
GTAGTAGGGATGGTGGGGGTGGCGGCAGCAGCAGCAGCGGCAGCATCCGA
GCGCCGAACAGACAGAAGAAGGCGTCGGCCAGCAGCAGGAGGTGCCGCGA
CGAAAGTCAGCGACGGGGGAAATCAGCAGAAGCGGCCGGGATCGGCGTCC
GTCAGCGGCCCGTCGAAGCGCCTGCACGAGATGAAGGAGTACTTCCGCCG
TAGCCAGCGGGCACCGAGCAGCGGCGGGCACGGGCAGCACGACGACGCCC
ACGACAGCGGCCACGGCGGCCACTCGGAGCTCAAGCACGAGTACGACCGC
GACCATAACCCGCATCGCTACCCGTATTTCGAGGGCAGCGCGTCCGCCGC
CGTTTTCCGTCCCCGTGGCGGCGGCAGCGGCGGCGGCAGCGGCGGCGGCG
GCGGTGGCAGCGTGAACGTCTTGCCGGGACTCACCGGCGACATGAGCTAC
GACGGCCTCCGTAGAGAGGGCAGCGCGAACGGCATCAGCATCGGCTCCCA
AGATCAAGGCAACGGCGGCGTGGGCGTGGGCGAGGTCGGGGACGGCGGCG
CTACCGGAGGAATCGGCGCCAGCAACGGCGGCGGCGTCTACGGCAAGAAC
GACCAGCAGCAGCAGCAGCGCAGCAACATCATGCCCTGGCAGCACGATAT
GATCAGCGGGAACGGCTACTCCCCCTCTTCGGTGAGCCACCACCAGGGCG
GCAGCTCCGGCTCCAACCCGACGACTGACGTCCTGCCCCCGGTGTCCATC
GGCGGCAGCCTGCAGAACGGCGGCGGCGGCGGCGGCAACCACAACATCAG
CAACGACGGCGAAGACAACGGCAGCAGCAGCATCGTCGAAGGAGGCGGCG
GAGGAGGCACCGACTCCGGAGACGTCGGCAGCGTGGAGTTCGACCCCCAG
GCCGACTGCAGACCTTCGGTGATCGGCTCCCACCACAACAGCCACGCGAA
CGTGACGGTGTCCGCGGGCGGGGGAAGCCCGACGTCGTGGTGGCGGGACG
CCCCCGAGCCGGCCGCGTCCAACTTCCCGTGGGACCTCCAGCTGCCGAAC
CCGGCGCCACCGCTGGCTCTGTCGTCGCACACGGGCGGCGGAGGCGGCAG
CGGCGGCGGCGGTCTCCAGGAGTCGGCGCTCGGCGGCGGCGGCGGCGTCG
GGGGTGGGAGGGGCGGCGGCAGCGGCGGCGGCGGCGGCCCTCCGGCGTCC
TTGATGGGCGGCGGCAGCGCGGTGATGTCGACAATTCGTGGTGGCGGTGG
CAGCGGGGGCGAGGCGATGGACCACCTCAGGTTCGGCAAGCCGTCCCCCG
CTTCCCTAGCCGGCCTCGGGCCGGCCCCCAGCCTTGGAGGCGGCAGCCAC
CGCCACCGCGGCGGCGCGGCCGAGCACCTGAGCCAGCCGGGCAGCGTTGT
GGACATCCTGGAGAACGGCGGCAACGGCGGCATGCGGTCAGGCGGCACCA
CCATCTTGTTGGAGGCCGTCGGGAGGGAGTCCTACTGCAGCGGCGGCGGC
GGCGGGGGCCTAGGCCGCTGGGGCTCAAACGCCTCCCCTCCCTCGGCGAC
CGAGATCGCGTGGGGGCTTGGGAGCAGCAGGAACGGCAGCGGTGGCGGCG
GCGGCGGCGCAGCCGAGAACTATATGTCGGCCCGCAAGCTTGAAGAATCG
TGCCGCCGCATGCAGCAGGCCCCGCCCTGCGACTCTCTAGTTCCACCGGC
CACTCACGCCTCGGCCTACAACGTCGTCCCCGTCAACCCCAGGAGCCTGC
TGCACGCCGGCCCTTTCGGAGGCGGCTCTGACCGCTACGGGGCGCACGAG
TTCAAGACGCTGTCTATGGCGTCCGGGGACCCCGAGGGGGTGGTTTTCGG
CCGCGCCGGTGGTGGCGGCGACGGCGGTGGCCGCGGTGAAATGTCTCGCG
CCAAGCGCGCTCGGGTGATTAAGCGCGAGATGGATTCGATGCACCTGTCC
CCGAGCGGATCGGGGGCCGGGCTGTCCAGCGAGGAGGCGGCCTTCGGCCG
CCTTATGGAGAGGAACAGCGGGGGCGGCGGGGGCGGGGGCAGGAGCAGGG
GCGTGGCGGGCAGCGTCGGCCACGGCGGCCATGCTTCCGTGCGCGATGCG
GCGGGGTCGTGGGGCGGCGGCGAGAGCGGTCGTAGTAGGGATGGTGGGGG
TGGCGGCAGCAGCAGCAGCGGCAGCATCCGAGCGCCGAACAGACAGAAGA
AGGCGTCGGCCAGCAGCAGGAGGTGCCGCGACGAAAACTGCAATTCCCAC
CCGAACTTCGGCATCGAGGGCGACCGCAAAGCGGTCTACTGCGCCAAGCA
CAAGCTTCCGGGGATGGTCAACGTCAAGGCGCCCCGCTGCAGACTGCAAT
TCCCACCCGAACTTCGGCATCGAGGGCGACCGCAAAGCGGTCTACTGCGC
CAAGCACAAGCTTCCGGGGATGGTCAACGTCAAGGCGCCCCGCTGCAGGG
AGCCTAGATGCACCCGCAACCCCGTCTACGGAAACACCGGCGACCCCCGC
GCCACCTTCTGTCTCTCGCACAAGAGCCCGATGATGGTGGACGTCAAGAA
CCGGTGCTGCGAGCACCCGGGCTGCAAGCACCAGCCGTCCTTTGGCCTGG
TGGGCGACCGGCGGGCCAACTTCTGCTTCGCGCACAAGCTGCCGACGCAC
GTCAACATCCGCCGCGCAAGGGCCCGGGCGAGCTGAGGAGCCTAGATGCA
CCCGCAACCCCGTCTACGGAAACACCGGCGACCCCCGCGCCACCTTCTGT
CTCTCGCACAAGAGCCCGATGATGGTGGACGTCAAGAACCGGTGCTGCGA
GCACCCGGGCTGCAAGCACCAGCCGTCCTTTGGCCTGGTGGGCGACCGGC
GGGCCAACTTCTGCTTCGCGCACAAGCTGCCGACGCACGTCAACATCCGC
CGCGCAAGGGCCCGGGCGAGCTGA back to top
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