prot_C-linearis_contig9.16729.1 (polypeptide) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI) HSP 1 Score: 280 bits (716), Expect = 1.910e-87 Identity = 155/247 (62.75%), Postives = 179/247 (72.47%), Query Frame = 0
Query: 1 MPILGKAKCTDFLRRWTRASLATSVEAFDGVWKDVEDMVKGTGCQEYINSRTSEYPFAPESTFFHWARCFHPTVMTLDMTSPQRVEGTFGVLKTGRVLRRNSTFRQMRTGCGTAPPRIQNVSALEVTKRI-LRKGYVEHDVKKPMEKII----DRGWSQQIRAGEVWSEMLASLAYDASTMVVEGHASMQFLQHLATRSATDSNDTTNGGGHDDGNGDVCCQVPKEVLEEEEAPDTTIFGPRRCMHS 242
+ IL KC D LRRWTRASLATS+EAFDGVW DVED+VKGT C+EYI F E HWARCFHPTVMTLDMTS QRVEGTF VLK GRVLRRNSTFRQ+R C ++ S ++ TK+ L KGYVE+DVKK MEK++ + G S+ + E+W+EMLAS AYD S +V EG SMQFLQ+LATRS DSND+TN GHD G GDVCCQVPKEV EE+EAPDTT+FG +HS
Sbjct: 185 LSILKSEKCADLLRRWTRASLATSIEAFDGVWTDVEDLVKGTDCEEYI------LKFLYERRK-HWARCFHPTVMTLDMTSSQRVEGTFSVLKKGRVLRRNSTFRQVRAKCEQIAGELRLASTMQATKQTSLGKGYVENDVKKSMEKVMTAYAEVGASKYAKE-EIWAEMLASSAYDTS-IVTEGRDSMQFLQNLATRSVNDSNDSTNVSGHDHGAGDVCCQVPKEVFEEDEAPDTTMFGTT-SLHS 421
BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE) HSP 1 Score: 146 bits (368), Expect = 2.670e-36 Identity = 98/301 (32.56%), Postives = 151/301 (50.17%), Query Frame = 0
Query: 6 KAKC-----TDFLRRWTRASLATSVEAFDGVWKDVEDMVKGTGCQEYINSRTSEYPFAPESTFFHWARCFHPTVMTLDMTSPQRVEGTFGVLKTGRVLRRNSTFRQMRTGCGTAPPRIQNVSALEVTKRI--------------------------------------------------------LRKGYVEHDVKKPMEKII---DRGWSQQIRAGEVWSEMLASLAYDASTMVVEGHASMQFLQHLATRSATDSNDTTNGGGHDDGNGDVCCQVPKEVLEEEEAPDTTIFGPRRCMHS 242
K KC D +RR+T AS ATS++AF+ +W +++++V+GT C+EYIN Y F HWARC HPT MTL MT+ QRVEG+F V+K G +R+NSTF +R T + S + V++ + LR ++E DVKK +E ++ ++ + E+ +EM+AS +YD +T++V+G S +FL+ LA + + ++DGNGDVCCQVP +V + ++ PDT++FG C+ S
Sbjct: 966 KRKCGGEVFADVIRRYTAASFATSMKAFERIWNNLKEVVEGTPCEEYING----YLFDQRK---HWARCCHPTTMTLGMTASQRVEGSFSVIKNGGAVRKNSTFGAVRKRVETVAEDLALASRMWVSRGVKARVALYHIFILIHCIGMYGLLRGVSHTVEPASFTITSITAVRCLSPCRLSTKAGSLRFAHMEDDVKKAIEPVMKEYEKAGASTYARREIMAEMVASDSYD-TTVLVKGRESKRFLEDLAAQPS-----------NNDGNGDVCCQVPADVFDGKKHPDTSMFGTT-CLQS 1246
BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Match: A0A6H5K6K4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K4_9PHAE) HSP 1 Score: 52.0 bits (123), Expect = 9.620e-5 Identity = 33/85 (38.82%), Postives = 46/85 (54.12%), Query Frame = 0
Query: 158 AGEVWSEMLASLAYDASTMVVEGHASMQFLQHLATRSATDSNDTTNGGGHDDGNGDVCCQVPKEVLEEEEAPDTTIFGPRRCMHS 242
A E SEML L Y ++VEG SM+FL+ L + + DGNGDVCC+VP+E + ++ P+T FG C+ S
Sbjct: 4 ASEFMSEMLTFLYY-CPEVLVEGKGSMRFLEDLTAHPS-----------NRDGNGDVCCEVPREAFDGKDNPETK-FGAI-CLQS 74 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig9.16729.1 ID=prot_C-linearis_contig9.16729.1|Name=mRNA_C-linearis_contig9.16729.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=246bpback to top |