mRNA_C-linearis_contig9.16729.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig9.16729.1
Unique NamemRNA_C-linearis_contig9.16729.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI)

HSP 1 Score: 438 bits (1126), Expect = 2.100e-144
Identity = 231/330 (70.00%), Postives = 259/330 (78.48%), Query Frame = 3 
Query:   36 RYNYKLCLYVGVDSENKTQIFAQGFFSNESTEALDFANKFFLEICGGHPKVIITDSDAAMKHSVQDVFP--HTTHLLCS*HICKNIKKKCMPILGKAKCTDFLRRWTRASLATSVEAFDGVWKDVEDMVKGTGCQEYINSRTSEYPFAPESTFFHWARCFHPTVMTLDMTSPQRVEGTFGVLKTGRVLRRNSTFRQMRTGCGTAPPRIQNVSALEVTKRI-LRKGYVEHDVKKPMEKII----DRGWSQQIRAGEVWSEMLASLAYDASTMVVEGHASMQFLQHLATRSATDSNDTTNGGGHDDGNGDVCCQVPKEVLEEEEAPDTTIFG 1004
            RYN KLCL+VGVDSENKTQ+FAQGFFSNESTEA DFANKFFL+ICGGHPKVIITDSDAAMK S++ VFP  HTTHLLCS HICKNIKKKC+ IL   KC D LRRWTRASLATS+EAFDGVW DVED+VKGT C+EYI        F  E    HWARCFHPTVMTLDMTS QRVEGTF VLK GRVLRRNSTFRQ+R  C      ++  S ++ TK+  L KGYVE+DVKK MEK++    + G S+  +  E+W+EMLAS AYD S +V EG  SMQFLQ+LATRS  DSND+TN  GHD G GDVCCQVPKEV EE+EAPDTT+FG
Sbjct:   95 RYNNKLCLFVGVDSENKTQVFAQGFFSNESTEAFDFANKFFLDICGGHPKVIITDSDAAMKESIRGVFPPPHTTHLLCSWHICKNIKKKCLSILKSEKCADLLRRWTRASLATSIEAFDGVWTDVEDLVKGTDCEEYI------LKFLYERRK-HWARCFHPTVMTLDMTSSQRVEGTFSVLKKGRVLRRNSTFRQVRAKCEQIAGELRLASTMQATKQTSLGKGYVENDVKKSMEKVMTAYAEVGASKYAKE-EIWAEMLASSAYDTS-IVTEGRDSMQFLQNLATRSVNDSNDSTNVSGHDHGAGDVCCQVPKEVFEEDEAPDTTMFG 415
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BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 245 bits (626), Expect = 6.040e-67
Identity = 152/396 (38.38%), Postives = 215/396 (54.29%), Query Frame = 3 
Query:   36 RYNYKLCLYVGVDSENKTQIFAQGFFSNESTEALDFANKFFLEICGGH--------------PKVIITDSDAAMKHSVQDVFPHTTHLLCS*HICKNIKKKCMPILGKAKCTDFLRRWTRASLATSVEAFDGVWKDVEDMVKGTGCQEYINSRTSEYPFAPESTFFHWARCFHPTVMTLDMTSPQRVEGTFGVLKTGRVLRRNSTFRQMRTGCGTAPPRIQNVSALEVTKRI--------------------------------------------------------LRKGYVEHDVKKPMEKII---DRGWSQQIRAGEVWSEMLASLAYDASTMVVEGHASMQFLQHLATRSATDSNDTTNGGGHDDGNGDVCCQVPKEVLEEEEAPDTTIFG 1004
            RY++KLCL+VGVDSENKT IFAQG  SNE   + DFAN+F LEI GG               P+VIITD+DAAM  SV ++ PHT HL  S HI KN+K+KC    G     D +RR+T AS ATS++AF+ +W +++++V+GT C+EYIN     Y F       HWARC HPT MTL MT+ QRVEG+F V+K G  +R+NSTF  +R    T    +   S + V++ +                                                        LR  ++E DVKK +E ++   ++  +      E+ +EM+AS +YD +T++V+G  S +FL+ LA + +           ++DGNGDVCCQVP +V + ++ PDT++FG
Sbjct:  868 RYDFKLCLFVGVDSENKTGIFAQGLLSNEQISSFDFANRFLLEIRGGTQSHHLLPTPPTPHPPQVIITDADAAMTSSVAELMPHTKHLYSSWHISKNLKRKC----GGEVFADVIRRYTAASFATSMKAFERIWNNLKEVVEGTPCEEYING----YLFDQRK---HWARCCHPTTMTLGMTASQRVEGSFSVIKNGGAVRKNSTFGAVRKRVETVAEDLALASRMWVSRGVKARVALYHIFILIHCIGMYGLLRGVSHTVEPASFTITSITAVRCLSPCRLSTKAGSLRFAHMEDDVKKAIEPVMKEYEKAGASTYARREIMAEMVASDSYD-TTVLVKGRESKRFLEDLAAQPS-----------NNDGNGDVCCQVPADVFDGKKHPDTSMFG 1240
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BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 1.970e-50
Identity = 125/333 (37.54%), Postives = 172/333 (51.65%), Query Frame = 3 
Query:   33 CRYNYKLCLYVGVDSENKTQIFAQGFFSNESTEALDFANKFFLEICGGHPKVIITDSDAAMKHSVQDVFPHTT-HLLCS*HICKNIKKKCMPILGKAKCTDFLRRWTRASLATSVEAFDGVWKDVEDMVKGTGCQEYINSRTSEYPFAPESTFFHWARCFHPTVMTLDMTSPQRVEGTFGVLKTGRVLRRNSTFRQMRTGCGTAPPRIQNVSALEVTKR-ILRKGYVEHDVKKPMEKII----DRGWSQQIRAGEVWSEMLASLAYDASTMV---VEGHASMQFLQHLATRSATDSNDTTNGGGHDDGNGDVCCQVPKEVLEEEEAPDTTIFG 1004
            CRY     L++GVDSENKT +FAQGFFS++S++   +A K +  ICGG P+VIITD+DA M H+V+   P TT HL C  H+ KN++K C   LGK K + F R    A+ A + EA    W ++   VKG+ C+EY+      +         HW+RCF PT MTL+MT+ QRVEG F VLK GR++ R  +  +++             S L  TK   L + +++  V K  E +     D G S      E+ +EM AS AYD + +     +  A    L  LA R           GG  +G    C  VP E  E    PD T++G
Sbjct:  151 CRYGMHFMLFIGVDSENKTVVFAQGFFSDQSSDTYQWALKHYCTICGGQPEVIITDADAGMTHAVETFLPSTTVHLYCLWHVMKNVRKNCARALGK-KASRFYRLLHAAAFAATEEACSDAWSEIFRHVKGSDCEEYVTGHLLRH-------HRHWSRCFFPTTMTLNMTATQRVEGMFSVLKKGRIVNRRCSLVRVKAELEKRIAGFTLASNLLSTKAPSLGRQHIDDHVLKTAEHVFRQLTDVGASTYA-VNEMVAEMRASAAYDTAVLTDKQADDAACHDCLDGLAER-----------GGRTEG---YCADVPAEAFEGSHDPDITMYG 460
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BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 4.690e-21
Identity = 54/87 (62.07%), Postives = 64/87 (73.56%), Query Frame = 1 
Query: 1093 KVGHLVVVGPGGFQLCTCLQLLRRVLQCRHVLAALVTQLKRSDEFEGLSIHPRWRSSVEPWSIVDVGLGTFGGDRDESFDGGFIGDW 1353
            KV H+VVVGP GFQLCTCL+L+R  L C HV AALVT+L R+ +F G SIHPRWR SV  WS+ +V LGTF  D  E+F GGF  D+
Sbjct:  840 KVSHIVVVGPKGFQLCTCLKLMRCGLPCSHVFAALVTRLDRASDFIGASIHPRWRKSVVEWSLRNVALGTF--DGHETFTGGFTEDF 924
[Close]
BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Match: A0A6H5JY17_9PHAE (SWIM-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY17_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.900e-17
Identity = 59/174 (33.91%), Postives = 91/174 (52.30%), Query Frame = 3 
Query:   63 VGVDSENKTQIFAQGFFSNESTEALDFANKFFLEICGGH-PKVIITDSDAAMKHSVQDVFPHTTHLLCS*HICKNIKKKCMPIL-GKAKCTDFLRRWTRASLATSVEAFDGVWKDVEDMVKGTGCQEYINSRTSEYPFAPESTFFHWARCFHPTVMTLDMTSPQRVEGTFGVLK 578
            VGVD EN++ +  QG   +E  E   +  + +    GG  PKV++TD+D AM  ++++ +  T HL C  H+ KN+ K C      K +    LR +  A+ A + EAF     D+E +VKG  C+EY+++   +           WA    PT++T+ M + QR EG FGV K
Sbjct:    2 VGVDDENRSCVLGQGVLRSECKETFQWFLEAYETAAGGRRPKVMLTDADRAMTSALEE-WTTTLHLFCLWHVFKNVLKNCSSSFPDKEERAKMLRLFRSAAYAATPEAFARYRVDLEKIVKGKKCEEYMDALIQDKT--------KWAFSCRPTLLTMGMVATQRTEGMFGVAK 166
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BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Match: A0A6H5K6K4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K4_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.220e-16
Identity = 44/68 (64.71%), Postives = 49/68 (72.06%), Query Frame = 1 
Query: 1096 VGHLVVVGPGGFQLCTCLQLLRRVLQCRHVLAALVTQLKRSDEFEGLSIHPRWRS-SVEPWSIVDVGL 1296
            V HLVV+GP  FQ+CTCLQ++RR  QCRHVLAALV    R  EF G SIHPRWR  S EPWS+  V L
Sbjct:   99 VSHLVVLGPDRFQMCTCLQVMRRGWQCRHVLAALVRS-NRDSEFAGASIHPRWRPRSAEPWSLERVAL 165
[Close]
BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Match: A0A6H5JEH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEH9_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 6.340e-14
Identity = 35/53 (66.04%), Postives = 44/53 (83.02%), Query Frame = 1 
Query: 1093 KVGHLVVVGPGGFQLCTCLQLLRRVLQCRHVLAALVTQLKRSDEFEGLSIHPR 1251
            KV HLVV+G GGFQ CTCLQ++RRV QCR +L ALVT+L R+ +F+G +IHPR
Sbjct:    9 KVDHLVVIGLGGFQRCTCLQVIRRVSQCRQILVALVTKLGRASDFKGTTIHPR 61
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BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Match: A0A6H5L2H3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H3_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 8.980e-9
Identity = 52/140 (37.14%), Postives = 65/140 (46.43%), Query Frame = 1 
Query: 1099 GHLVVVGPGGFQLCTCLQLLRRVLQCRHVLAALVTQLKR-------SDEFEGLSIHPRWRSSVE----PWSIVDVGLGTFGGDRDESFDGGFIGDWDQSVR*FWRFA-------GRKHPGLLAACLERESVRQPHRDVWS 1464
            GH+VVVGPGGF LC+CL+ LR  L CRH  A LV  +         + EF+G S+H RWR S +    PW+   V  G   GD    +DG   G  D     FW          G  HP   AA    +     HR V++
Sbjct:  303 GHVVVVGPGGFYLCSCLKFLRHGLPCRHYFAVLVRFIGGKYGGVLLNHEFDGNSVHTRWRQSPDGSDAPWTASRVLEGAGHGD---GWDGCDHGQDDN----FWGPTYDDDGGEGGVHPAERAAKAVADRSGSDHRRVFA 435
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BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Match: A0A251SJ10_HELAN (Protein FAR1-RELATED SEQUENCE n=3 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SJ10_HELAN)

HSP 1 Score: 69.3 bits (168), Expect = 1.100e-8
Identity = 42/128 (32.81%), Postives = 64/128 (50.00%), Query Frame = 3 
Query:   36 RYNYKLCLYVGVDSENKTQIFAQGFFSNESTEALDFANKFFLEICGGHPKVIITDSDAAMKHSVQDVFPHTTHLLCS*HICKNIKKKCMPILG-KAKCTDFLRRWTRA--SLATSVEAFDGVWKDVED 410
            +YN     + GVD+  K   F  G   NE+ E+  +    FL+    HP++++TD DAAMK +V  VF  +TH LC  H+ K +  K   + G K + TD   R  +   ++      F+  WKD+ D
Sbjct:  266 KYNMIFVPFTGVDNHQKCVTFGAGLLYNETIESFTWLLDSFLKAHVKHPRLVLTDQDAAMKQAVSSVFTESTHRLCMWHVTKKLPAK---VCGDKLENTDLRSRIHKLVWNVFIKPSTFESRWKDLMD 390
[Close]
BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Match: A0A6H5K9T1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9T1_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.820e-8
Identity = 44/103 (42.72%), Postives = 55/103 (53.40%), Query Frame = 1 
Query: 1090 HKVGHLVVVGPGGFQLCTCLQLLRRVLQCRHVLAALVTQLKRSDE---------FEGLSIHPRWRSSVE----PWSIVDV------GLGTFGGD--RDESFDG 1335
            ++  HLVV GP  F LC+CLQLLRR L CRH  A LV  + R+ E         F+G  +H RWR   +    PWSI  +      G+G  G D  RDES+ G
Sbjct: 1178 NRPSHLVVFGPHNFHLCSCLQLLRRGLPCRHYFAVLVNLIGRTGESDEMAFIHTFKGACVHNRWRRREDGNDSPWSISSLLSSSGHGVGWDGHDEGRDESYWG 1280
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF6_ECTSI2.100e-14470.00Putative far-red impaired response protein n=1 Tax... [more]
A0A6H5K454_9PHAE6.040e-6738.38SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEJ0_9PHAE1.970e-5037.54SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JJS4_9PHAE4.690e-2162.07SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JY17_9PHAE1.900e-1733.91SWIM-type domain-containing protein n=3 Tax=Ectoca... [more]
A0A6H5K6K4_9PHAE1.220e-1664.71SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEH9_9PHAE6.340e-1466.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2H3_9PHAE8.980e-937.14SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A251SJ10_HELAN1.100e-832.81Protein FAR1-RELATED SEQUENCE n=3 Tax=Helianthus a... [more]
A0A6H5K9T1_9PHAE1.820e-842.72SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3439455..3446375 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score284.6
Seed ortholog evalue4.2e-74
Seed eggNOG ortholog2880.D7FLF6
Hectar predicted targeting categorymitochondrion
EggNOG OGs2CMGX@1,2QQB8@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1611
Cds size738
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16729.1prot_C-linearis_contig9.16729.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig9 3440102..3445801 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930762.5948653-UTR-C-linearis_contig9:3439454..34396391622930762.5948653-UTR-C-linearis_contig9:3439454..3439639Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 3439455..3439639 +
1690881236.619302-UTR-C-linearis_contig9:3439454..34396391690881236.619302-UTR-C-linearis_contig9:3439454..3439639Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 3439455..3439639 +
1622930762.6156232-UTR-C-linearis_contig9:3439987..34401011622930762.6156232-UTR-C-linearis_contig9:3439987..3440101Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 3439988..3440101 +
1690881236.6318233-UTR-C-linearis_contig9:3439987..34401011690881236.6318233-UTR-C-linearis_contig9:3439987..3440101Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 3439988..3440101 +
1622930762.722362-UTR-C-linearis_contig9:3445801..34463751622930762.722362-UTR-C-linearis_contig9:3445801..3446375Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 3445802..3446375 +
1690881236.701094-UTR-C-linearis_contig9:3445801..34463751690881236.701094-UTR-C-linearis_contig9:3445801..3446375Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 3445802..3446375 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930762.6306524-CDS-C-linearis_contig9:3440101..34401791622930762.6306524-CDS-C-linearis_contig9:3440101..3440179Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 3440102..3440179 +
1690881236.6444855-CDS-C-linearis_contig9:3440101..34401791690881236.6444855-CDS-C-linearis_contig9:3440101..3440179Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 3440102..3440179 +
1622930762.6476989-CDS-C-linearis_contig9:3440318..34404321622930762.6476989-CDS-C-linearis_contig9:3440318..3440432Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 3440319..3440432 +
1690881236.6572356-CDS-C-linearis_contig9:3440318..34404321690881236.6572356-CDS-C-linearis_contig9:3440318..3440432Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 3440319..3440432 +
1622930762.6660244-CDS-C-linearis_contig9:3440598..34407771622930762.6660244-CDS-C-linearis_contig9:3440598..3440777Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 3440599..3440777 +
1690881236.668426-CDS-C-linearis_contig9:3440598..34407771690881236.668426-CDS-C-linearis_contig9:3440598..3440777Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 3440599..3440777 +
1622930762.6863344-CDS-C-linearis_contig9:3440970..34410761622930762.6863344-CDS-C-linearis_contig9:3440970..3441076Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 3440971..3441076 +
1690881236.6788902-CDS-C-linearis_contig9:3440970..34410761690881236.6788902-CDS-C-linearis_contig9:3440970..3441076Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 3440971..3441076 +
1622930762.7032337-CDS-C-linearis_contig9:3445540..34458011622930762.7032337-CDS-C-linearis_contig9:3445540..3445801Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 3445541..3445801 +
1690881236.6894062-CDS-C-linearis_contig9:3445540..34458011690881236.6894062-CDS-C-linearis_contig9:3445540..3445801Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 3445541..3445801 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig9.16729.1

>prot_C-linearis_contig9.16729.1 ID=prot_C-linearis_contig9.16729.1|Name=mRNA_C-linearis_contig9.16729.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=246bp
MPILGKAKCTDFLRRWTRASLATSVEAFDGVWKDVEDMVKGTGCQEYINS
RTSEYPFAPESTFFHWARCFHPTVMTLDMTSPQRVEGTFGVLKTGRVLRR
NSTFRQMRTGCGTAPPRIQNVSALEVTKRILRKGYVEHDVKKPMEKIIDR
GWSQQIRAGEVWSEMLASLAYDASTMVVEGHASMQFLQHLATRSATDSND
TTNGGGHDDGNGDVCCQVPKEVLEEEEAPDTTIFGPRRCMHSTSS*
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mRNA from alignment at C-linearis_contig9:3439455..3446375+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig9.16729.1 ID=mRNA_C-linearis_contig9.16729.1|Name=mRNA_C-linearis_contig9.16729.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6921bp|location=Sequence derived from alignment at C-linearis_contig9:3439455..3446375+ (Chordaria linearis ClinC8C monoicous)
CACGTTCGTACTTTCTATTGTGCCAACCATACTGCCGGTACAATTACAAA
CTCTGTTTATACGTGGGCGTGGACTCCGAAAACAAGACGCAGATCTTCGC
GCAAGGATTCTTCAGCAACGAATCGACTGAAGCGCTCGATTTCGCCAACA
AGTTTTTCCTCGAAATATGTGGGGGCCACCCTAAGGTGGGTGTGGTTGCG
TTTGTATGTGACTTGCTCGTTGAAAAACTTCTTTAACCTTGATGCGATCC
ACCAAGCCGTCTAAGTGGAGAAAAGAGGGCAGGGCGCAGCAAGCGTGCAC
ACACGTCTTTTGGCTACCCATGCCTGTTCATCGTGTCCCGAAATGAAAAT
ATCAGGCTATCCTAGACAACGTCGGCGTCCGCAATTTGTCCTCGGTTTAG
GTATCTAGTGCAAGGAGGTTCGGCACGGATGGTGGCGCAACGTGTGTGTG
CGGTACTGGCCGTTTTTGTTTGGCCGTCGTTGTTATATCTCGCTCTGACG
ATCTCCATTCCCACACCCGCGCCCTCCATATAGGTTATCATCACAGATTC
CGACGCGGCTATGAAGCACTCTGTTCAAGATGTGTTTCCCCACACGACGC
ACTTGCTCTGCTCGTAGCACATCTGCAAGAACATCAAGAAGAAGTGTATG
CCGATACTGGGAAAAGCGAAGTGCACGGACTTTCTCAGACGGTGGACGAG
GGCATCGTTAGCGACATCGGTCGAGGTGGGAACGCATACTTCCGACGTTC
CCCACGTTTGTGCTTTGGGAGATTACTTACGCATGCTCGTTCGCCGTTTC
GTGCATCACTTCTACCACCACCCTCGCCACACACTCTTGTGCTATCGTCT
ACGACCGACCATAGGCGTTCGACGGGGTTTGGAAAGACGTCGAGGATATG
GTGAAGGGCACGGGGTGTCAGGAATACATCAACTCCCGTACGAGTGAATA
CCCGTTTGCGCCTGAGTCCACTTTCTTCGTGATCAAATTGTGTTGAGCAT
GTGGTGTTCTGTGATTTGCCCTGTCATGACGTATACTTTGTATGGTCTTC
ATCGAATGGTTTCTGTCTCGGCGAAGGTGGTTGGTGTTGGTTGCGCGCTT
TAACATACGATCACGCCCCCTTCCTCTCTGGTAAACGATGGAAGCACTGG
GCGCGCTGCTTTCACCCCACCGTCATGACCTTGGATATGACATCCCCGCA
GCGCGTCGAGGGCACTTTTGGCGTTCTCAAGACGGGACGTGTCTTGCGAA
GAAACTCGACCTTTCGCCAAATGCGAACGGGTTGCGGAACAGCTCCTCCT
CGCATTCAAAATGTGAGTGCCTTGTGTCGAATCGTTGCTTCAATATTTTG
TCTCCTTTTTAGGAAATAGTACATGTTGTACAGAGCCTATCCTCCGCCGG
GAAAAGCGGGGGGCGGGCGGGGCCGTCGCAGGGCTTTACTACGCTGTGAT
GGCCATTTTGTTTCGTAAGCATGTCGGACATCGCCGTAAACCCGACCGCC
ACCATCCAATCTGCAGGGAAGTCACGAAGCGGATCCTGAGGAAAGGCTAC
GTGGAGCACGACGTCAAGAAACCTATGGAAAAGATCATAGATCGAGGTTG
GAGCCAGCAAATACGCGCAGGAGTTGAGCTCGTCCCTGGTGGTTTTAGTG
CCTCTGATGCTTTCACGCGTGTATGCAATGCTGATACAGAGCGCGGTATG
TCAGTACAAAACTCTCCTCGAAGTATAGCGACAGTTACGTGTGTCGGTTG
GGAGTAGGCCGGTCTCTAGCTTTAGCGTGTGCTTGGTTCGGGTACGACCA
CTCTCTCTCTCTGCTCCCCCCTTGTTCCTGGCAGCCTATTATGGACGTGG
GACAACCGATAATACACGGAGAAAAAGTTAAGCCATTAGACTGTGAGAGC
CAGTCAACGTTATCAGACGCCAGTTGTATCAACATTCGAATTTTATTGGC
CTATAGATATACAACTGAAAAATGGATCCAACGTTGGAGCAGAAGGTCGC
TGCGCTGGACGAGCGACTTGCAAAACAAGAAGAGTCAAGGGCTGCTGCAG
AGAAGGCAGCCACTGAGAGAGCTCACAAGCAGCAGAAGCAACATGAAGAT
ATGATGCAGGCACTTGCCCGACTCGTAAAGTCGAGTGAGGAGCAGAAGGA
AGGTGGGCAGGCGCATACGATGACGGGTGGCGAGGGACGAAGATCCTGCG
CAACCCACACCTCACCAAGACCTTCACGGCGCTGCACAAGAGAGTGTTGT
ACCCGTCGAGGTTGTTCCACACGTGGATCAACCTGGCGAGAGCGGATAAG
ACGGAGACTACGGTCTCCAAGGTGGGTCCGTTAGCACACACGGAGCCAAG
ATATCTTCGAGCTCCTATGAAGATGGTCCCGCCAACGCTCAAGAACAGAA
ATCAATTTCAAGCTTTCGTACTACGCGAAATACCAAGATTTCGATAGCGT
GTTGCACACTGTGAACAACATCTCGATGTTGGAGATGATCATCAGCTGTC
GAGGGTAGACTTTATCCGTGGAGGGGTCGACGCAGAAACGTAAGAAAGGC
ACATGAGAGATTGGTTTTTCTTTTCCCAAGCGTTTGATCTCCCAATAGAC
CTTGGGAGATTCTCTAGGAACACCCCCGGGAAATTTTGGGAGGATACTGT
CAAACACTACTGTCCCAAAACCACTGGCGATCAGATAGCCATGAGGAAGA
CGCTCAGTGGGTTCCAAGTAGCGAAGGGTATAGACCCCATCCCGAGGTTG
TACGAACTAGAGGAGCACGTCGCAAAAATGAATGTTGCTGGTATTCAAGT
CGATGAAGAAACGAACCTGTGCATGTTTGTTGCTGGCCTTTCCGTTTCCG
AGTACGACTTCGAAATCCAACAGTTGAGTCGGAAGCTGGCGTTTGACCGA
GATGAGGTCATTAACACGATAGAAGCGCAGCATAACCTTCTACAAACTAG
AAGGTGGAAGAACCCCCCAGCAGGCCATGCGCTCATAGCTGATGCGCGTG
GCGGGAACGGGTCGCGGAGGCGGGCGAGGCAGTAGCTACAACAGAGATAA
CAAGAAATCCAGCGACCGGAAGAGCGGCGTAGAGGACGACAAGGGACCGG
CCAAGGGACCGGTCTGCTACAACTGTTATGGAAGAGGCCATTTTGCCCGC
GACTGCACCGTGAAGGTGTGCAAGAGATGCCACGGAAGAGGGCATGAGGA
AGATAAATGTGCAACACCGGCGGACCTGAAAGCTAATCTGGCGGTAGAGG
CGCCGGATTCGGACTTCAGTGTCTCGTGGAGGTTCTTTCGGGGGTGGAGC
GAGTACCCCCCAAGCAGAAGCAGAAACAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACGGCAACGACAGCGGCA
GTGTCAGTATTAAAGACGGCGCTGACGGCTACGCCGAGCTCCCCGCTGAA
CTGCCTAAAACCGAAGCCAACCGGCTGCAGAGCTGGGGCTGGCACGGTGA
CGCGATCTCTTCGTCTAGGCTGCAGAGCAGGCCGGAGAGGTACACGGACG
TTGCCGAACAAAAGGGTCTCAAAGCCTCACCTCCGGAACGTGCTCTGGCG
GTTGTAATCTTGAGAGATTGTCCTCGACGGCTGCGAATATGACGTGTTGT
CAAGATCGCTCGAGGCAAGTTCAACAGGTTCCGACGCTCACGAGTCCGCT
TCCAACGTCCTGTCACTACTGAGCAGCATGAACGACGCGGACATCGAGTC
CGCCCTGGCTGTCAAAGGCAAACAAGGGGAGTACGAGTTGGGTTTTGTGA
TGCCGTCTGGTCCCGTATCTGAGGCGGAAACACCTCCAGTATCTGTAGCG
GGTGTTGAAAAGTTCCGCTATAGAGGCGCCTATAAGTGGGCAATGGAGAA
AGAAATGAGAGGTCTGATTGATTCGGGTACTTTCTATCTTTTACCGGGTC
TGCCCAAGGGAGAAAAGGCAGTCAACATTAGGTGGATATTGTCTCTCACG
TCTAATGAGGATGGGATGATCACAACACCGAAGGCTAGGCTGGCTGCAAA
GGGATTTATGCAGCAAGAGGGTGTAAATTGCCACCAGACCTACGCACCCA
CACCCGCAGCGGCTTCTGTCAAGATGGTATTGGCAGTTGCTAACCAGTTA
CGGTACACGACGTATCACCTAGACGTCAAGCAGGCATTCACTCAAGCGAA
GCTGGATTGTAATGTAATCATGAAGCTCCCGGGTGGATGTGGGGAACTTT
CTGGTGAATATATGAAACTTGAGAAGGCTCTGTATGGCCTGAAATAGAGT
GGTTTGCTGTGGAACGACTTGCTAGTTTCGAAGCTGGTCGGAAAACACAA
CATTGAGCAGTGCAAGGCCGACCATTGCGTATTTCGCAAGATCGTAGATG
GTGCAGTAGTACTAATCCTGACGGTACATACATGTAGACGACATGGCTGC
CGCTGGTCCTAGGGTTGAGGTTGACAAGTTGCTTGTGACACTTCAACGAG
GATTTCACCACGGTTGACCTAGGAGAGCTTTCGTTCTTCACGGGGTGCGC
GGTTATTCAGGATGTAGAGAACGGAATAACCCAAATCAACCAAAAGACGT
TCATCGAAACACTTGCAAAGCGTTTCGACGTGACCACAACCGCTCTTTAT
CCCGCTACCCCCGGTGCGAATCTAGGACCGAGGATGAAGGGCGAGCCAGG
TGGCACGTGGCCCTACCGGGAGGTCGTCGGGGCACTGATGTGGCTGGTTG
TCTGGACGAGACTAGAAATCAGCAACTCGACGCGTGCTGTTGCACGCAAC
GCGAGCAATCCGACGGAACGACACTGGCAGGCGGTACTTCAGATTGTTAA
GTATCTGCTTGAAGTCAAGGATCTGAGTCTCACGTTTAGACGGACTCCGG
ATTTTAATATGTCAGTGTACACGGACTCGAACTTTGCCGATAAGGCTGAC
GACAGGCGATGTGTATCGGGGGTTGCGGTAACTCTCGGAAATGCGACTGT
CAGTTGGATTAGCAATACGCAAAAGATCGTTACTCTTTCAACTACTGAGG
CCGAGTATGTGGCACTTGGTGATGGGGTTAAAGAAGTCCTGTTTGCGATG
GCGTGGCTTCATTTATAGTCCCAGATCTCGCTGAGAAAGTCATAGAGGTT
TTCGTCGACAACGACGGAGCAATAAACTTAGCTTCGAACCCTCTTAGCTC
TGCGAGGACGAAGTACATTGACGTGCGTTTCCATTTCGTTCGGGAATTGG
TTTCATCGGGTGCGATTGTCGTCAAATACGTTTCGACGAATGAACAGCGT
GCAGACATCATGACAAAGCCGCTCGTAGGCTCTATCTTTAAGGAACACAG
AAACTTCCTGATGAACCTGCATTATTAGTAATCTACTTTGTGGCTCTGTT
CTGGGTCATAGTGTGGTTTATTTTATTTTTGTTTAGCGCCGGATGACTTA
CTAGTCTATGTTTTAAGTCTTGCGGAGAAAGACAATGCCATCTCGCATTA
CTGTTGCGGTCTGTGTACCTATGTCAGGAGTAGGCGATCTCTGCTATTCT
TGTCTTCGCCTTAGTTTTCATCTAGGAGGCGCGGCTGTTGTGATATTGGT
ACAATTATTTTTTTCATATATGGGTAGCAAGGGGTTTTGATCCGTTGGGC
GGGTTTCCCCTTGTACACTACTTTGTATAGGTCATAACGTCTTTATGCCT
ATGTTTAGGTTCGTCTCTATATTGTGTCGAGCCGGGAGGGTGTCAGTACA
AGACTCTCCTCGAAGTATAGTGACAGTTACGTGTGTCGGTTGGTAGTAGG
CCGGTCTGTTCGACTAGCTGTAGTGTGCGCTTGGTTCGGGTAGGATACCC
GACCACTCTCTCTCTCTCTCTCTCTGCTTCCCCCTTTGTTCCTCGCAGCC
TATTGTGGGCGTGGGACAACCGATAATACACGGAGAAAACGTTAAGCCGT
TAAACTGTGAGAGCCAGTCAACGTTATCAGACGCCAGTTGTATCAACACG
GTACCTGTGTCCAGTTTCCGCCTGAAACCAATACTCGTTGCGTCCGCCCG
CCCTTCCTTGCATGCCCTGCACCTTTACTGTCACAGGAAGTTTGGTCCGA
GATGTTGGCGAGCTTGGCGTACGATGCTTCCACGATGGTGGTGGAAGGAC
ACGCCTCAATGCAATTCCTCCAGCATTTGGCCACGCGATCAGCCACTGAC
TCCAACGACACAACCAACGGCGGCGGGCACGATGATGGAAACGGCGACGT
GTGTTGTCAGGTGCCTAAAGAGGTCCTTGAGGAAGAAGAAGCACCAGACA
CGACCATTTTTGGTCCACGTCGTTGCATGCATTCTACCAGCTCGTAGAGC
GCGTGGAAATCGATTGCGTCGTTAAGGTCCTCTACAAGACAAGCTTGACC
ACAAAGTAGGCCACCTTGTCGTCGTAGGTCCCGGTGGGTTTCAGCTTTGC
ACGTGCTTGCAACTTTTGAGACGGGTGTTGCAGTGTAGGCACGTCCTCGC
CGCGCTTGTCACGCAGTTGAAGCGCAGCGACGAGTTCGAAGGACTAAGCA
TTCACCCACGGTGGCGTTCGTCTGTTGAACCGTGGAGTATAGTAGACGTG
GGGCTGGGTACGTTCGGTGGCGATAGAGATGAGTCGTTCGATGGCGGGTT
CATCGGTGATTGGGACCAGTCAGTCAGGTGATTTTGGAGATTTGCAGGGA
GAAAACACCCCGGACTCCTTGCTGCCTGTCTTGAGAGGGAGAGCGTACGC
CAACCTCACCGAGATGTGTGGTCGGGCCATTCGCACCTATACGGACAGCA
TGGCCAGCACGTCCAACGTGAGGGATCAATCCATGTTCAGCTCGCTGATT
TGATGCGCGATGTGGAAGACTTTGCTCGGAAGCGTAGAAATGGCGACACC
GAACAGTCTTCGCTCCAAGTG
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Coding sequence (CDS) from alignment at C-linearis_contig9:3439455..3446375+

>mRNA_C-linearis_contig9.16729.1 ID=mRNA_C-linearis_contig9.16729.1|Name=mRNA_C-linearis_contig9.16729.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1476bp|location=Sequence derived from alignment at C-linearis_contig9:3439455..3446375+ (Chordaria linearis ClinC8C monoicous)
ATGCCGATACTGGGAAAAGCGAAGTGCACGGACTTTCTCAGACGGTGGAC
GAGGGCATCGTTAGCGACATCGGTCGAGATGCCGATACTGGGAAAAGCGA
AGTGCACGGACTTTCTCAGACGGTGGACGAGGGCATCGTTAGCGACATCG
GTCGAGGCGTTCGACGGGGTTTGGAAAGACGTCGAGGATATGGTGAAGGG
CACGGGGTGTCAGGAATACATCAACTCCCGTACGAGTGAATACCCGTTTG
CGCCTGAGTCCACTTTCTTCGCGTTCGACGGGGTTTGGAAAGACGTCGAG
GATATGGTGAAGGGCACGGGGTGTCAGGAATACATCAACTCCCGTACGAG
TGAATACCCGTTTGCGCCTGAGTCCACTTTCTTCCACTGGGCGCGCTGCT
TTCACCCCACCGTCATGACCTTGGATATGACATCCCCGCAGCGCGTCGAG
GGCACTTTTGGCGTTCTCAAGACGGGACGTGTCTTGCGAAGAAACTCGAC
CTTTCGCCAAATGCGAACGGGTTGCGGAACAGCTCCTCCTCGCATTCAAA
ATGTGAGTGCCTTCACTGGGCGCGCTGCTTTCACCCCACCGTCATGACCT
TGGATATGACATCCCCGCAGCGCGTCGAGGGCACTTTTGGCGTTCTCAAG
ACGGGACGTGTCTTGCGAAGAAACTCGACCTTTCGCCAAATGCGAACGGG
TTGCGGAACAGCTCCTCCTCGCATTCAAAATGTGAGTGCCTTGGAAGTCA
CGAAGCGGATCCTGAGGAAAGGCTACGTGGAGCACGACGTCAAGAAACCT
ATGGAAAAGATCATAGATCGAGGTTGGAGCCAGCAAATACGCGCAGGAGG
AAGTCACGAAGCGGATCCTGAGGAAAGGCTACGTGGAGCACGACGTCAAG
AAACCTATGGAAAAGATCATAGATCGAGGTTGGAGCCAGCAAATACGCGC
AGGAGAAGTTTGGTCCGAGATGTTGGCGAGCTTGGCGTACGATGCTTCCA
CGATGGTGGTGGAAGGACACGCCTCAATGCAATTCCTCCAGCATTTGGCC
ACGCGATCAGCCACTGACTCCAACGACACAACCAACGGCGGCGGGCACGA
TGATGGAAACGGCGACGTGTGTTGTCAGGTGCCTAAAGAGGTCCTTGAGG
AAGAAGAAGCACCAGACACGACCATTTTTGGTCCACGTCGTTGCATGCAT
TCTACCAGCTCGTAGGAAGTTTGGTCCGAGATGTTGGCGAGCTTGGCGTA
CGATGCTTCCACGATGGTGGTGGAAGGACACGCCTCAATGCAATTCCTCC
AGCATTTGGCCACGCGATCAGCCACTGACTCCAACGACACAACCAACGGC
GGCGGGCACGATGATGGAAACGGCGACGTGTGTTGTCAGGTGCCTAAAGA
GGTCCTTGAGGAAGAAGAAGCACCAGACACGACCATTTTTGGTCCACGTC
GTTGCATGCATTCTACCAGCTCGTAG
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