prot_C-linearis_contig9.16727.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16727.1
Unique Nameprot_C-linearis_contig9.16727.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length288
Homology
BLAST of mRNA_C-linearis_contig9.16727.1 vs. uniprot
Match: D8LKS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS4_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 6.890e-85
Identity = 157/287 (54.70%), Postives = 174/287 (60.63%), Query Frame = 0
Query:    1 RTDGVSRDSADQQTGIIGQLQHASERGGLRIAKGAEKGIRSTQPSFTILAQHGQSTFRSTGEKDQRCYPPSYITNCIYGPSMLHNSIVLTDHFSSLAPFVEPVEKLCKPRPSTERLPLKQRVQQYTRSGRRQRINSGPGGNQTGNAGWSGAGAASRDYSAQGAGDKHVGLHLDVPTDKLKAELKRLVRPDGSLLEPLP-LCGIGVSPGYRGVTKGKGRFSLDADGWAVGGVHNGNKPNVCVSGATIPVTTRESPFKVPEYAIVPLRAGKLVIRNQNNAAAPKTMNKK 286
            R DGV RDSAD++TGIIGQLQHASERGGLR AKGAEKGIRSTQP+ TI+AQHGQSTFRSTG                                                                        I+SG G NQTG+AGW GAG A+RD+SA+GAG+K+ GL L +P DKL A L+RLV  DGSLLEPLP LCGI VSPGY GV K KG F LD +G  V  VHN NKPNVCVS   IPVTTR  PFKVP +AI P RAGKL++RNQNNA A K  NKK
Sbjct:   34 RADGVPRDSADEETGIIGQLQHASERGGLRSAKGAEKGIRSTQPAITIIAQHGQSTFRSTG------------------------------------------------------------------------IDSGGGDNQTGSAGWCGAGRAARDFSAEGAGEKYFGLRLKIPADKLAATLQRLVEEDGSLLEPLPPLCGIDVSPGYPGVIKAKGTFGLD-EGRVVLRVHNSNKPNVCVSEGAIPVTTRTPPFKVPAFAIGPPRAGKLMLRNQNNANALKKKNKK 247          
BLAST of mRNA_C-linearis_contig9.16727.1 vs. uniprot
Match: A0A6H5JI61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI61_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 2.880e-21
Identity = 53/82 (64.63%), Postives = 61/82 (74.39%), Query Frame = 0
Query:  205 SPGYRGVTKGKGRFSLDADGWAVGGVHNGNKPNVCVSGATIPVTTRESPFKVPEYAIVPLRAGKLVIRNQNNAAAPKTMNKK 286
            +PGY GVT+ KG+F LD +G  V  VHN NKPNVCVS   IPVTTR  PF VP +AI PLRAGK++IRNQ+NA A K  NKK
Sbjct:  218 TPGYPGVTRAKGKFGLD-EGRVVLRVHNSNKPNVCVSEGAIPVTTRTPPFTVPAFAIGPLRAGKVIIRNQSNANALKKKNKK 298          
BLAST of mRNA_C-linearis_contig9.16727.1 vs. uniprot
Match: A0A6H5KC74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC74_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 2.960e-14
Identity = 53/116 (45.69%), Postives = 56/116 (48.28%), Query Frame = 0
Query:    1 RTDGVSRDSADQQTGIIGQLQHASERGG--------------------------------------------------------LRIAKGAEKGIRSTQPSFTILAQHGQSTFRST 60
            RTDGV RDSAD+ TGIIGQLQHASERGG                                                        LRIAKGAEKGIRSTQP+  I+AQHGQSTFRST
Sbjct:   91 RTDGVPRDSADEDTGIIGQLQHASERGGRSSAWNTEAHSFYASCGAHIVSTKISSRSSMHPTDIIHVQHSRYPVMCTFSFACTGLRIAKGAEKGIRSTQPAIAIIAQHGQSTFRST 206          
BLAST of mRNA_C-linearis_contig9.16727.1 vs. uniprot
Match: A0A6H5J6K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K4_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.470e-13
Identity = 41/56 (73.21%), Postives = 46/56 (82.14%), Query Frame = 0
Query:   79 GPSMLHNSIVLTDHFSSLAPFVEPVEK-LCKPRPSTERLPLKQRVQQYTRSGRRQR 133
            GPS LHNS+V+ D F SLAPF+ PVEK LCKPRP+T+RL LKQR QQYT SGRR R
Sbjct:   48 GPSTLHNSVVINDRFPSLAPFLGPVEKKLCKPRPTTDRLFLKQRAQQYTTSGRRHR 103          
BLAST of mRNA_C-linearis_contig9.16727.1 vs. uniprot
Match: A0A6H5K3Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q8_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 5.390e-13
Identity = 39/55 (70.91%), Postives = 44/55 (80.00%), Query Frame = 0
Query:   79 GPSMLHNSIVLTDHFSSLAPFVEPVEKLCKPRPSTERLPLKQRVQQYTRSGRRQR 133
            GPS LHN + + DHFSSLAPF+ P+EKLCKPR ST+RL LKQR QQY  SGRR R
Sbjct:  133 GPSTLHNKVTIIDHFSSLAPFLGPLEKLCKPRDSTDRLFLKQRAQQYITSGRRHR 187          
BLAST of mRNA_C-linearis_contig9.16727.1 vs. uniprot
Match: A0A6H5L1U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1U0_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 6.060e-13
Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 0
Query:   79 GPSMLHNSIVLTDHFSSLAPFVEPVEKLCKPRPSTERLPLKQRVQQYTRSGRR 131
            GPS LHN+IV+TDHF SLAPF+ P+ KLCKPRPST+RL  KQRVQQ  +SGRR
Sbjct:   90 GPSTLHNNIVVTDHFRSLAPFLGPLAKLCKPRPSTDRLFTKQRVQQSIKSGRR 142          
BLAST of mRNA_C-linearis_contig9.16727.1 vs. uniprot
Match: A0A6H5KI01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI01_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 5.320e-12
Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 0
Query:   79 GPSMLHNSIVLTDHFSSLAPFVEPVEKLCKPRPSTERLPLKQRVQQYTRSGRRQR 133
            GPS LHN++ + DHFSSLAPF+ P+EKLCK R ST+RL LKQR QQY  SGRR R
Sbjct:  133 GPSTLHNNVTIIDHFSSLAPFLGPLEKLCKLRDSTDRLFLKQRAQQYITSGRRHR 187          
BLAST of mRNA_C-linearis_contig9.16727.1 vs. uniprot
Match: D8LFC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC5_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 5.100e-9
Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 0
Query:   79 GPSMLHNSIVLTDHFSSLAPFVEPVEKLCKPRPSTERLPLKQRVQQYTRSGRRQR 133
            GPS LHN++ + D F SLAPF+ P++ LCK R ST RL +KQR QQYT SGRR R
Sbjct:  147 GPSTLHNNVTIIDRFPSLAPFLVPLDNLCKRRDSTVRLFVKQRAQQYTTSGRRHR 201          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LKS4_ECTSI6.890e-8554.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JI61_9PHAE2.880e-2164.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC74_9PHAE2.960e-1445.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J6K4_9PHAE1.470e-1373.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3Q8_9PHAE5.390e-1370.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1U0_9PHAE6.060e-1373.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI01_9PHAE5.320e-1269.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFC5_ECTSI5.100e-961.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3405216..3409476 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16727.1mRNA_C-linearis_contig9.16727.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3405216..3409476 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16727.1 ID=prot_C-linearis_contig9.16727.1|Name=mRNA_C-linearis_contig9.16727.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=288bp
RTDGVSRDSADQQTGIIGQLQHASERGGLRIAKGAEKGIRSTQPSFTILA
QHGQSTFRSTGEKDQRCYPPSYITNCIYGPSMLHNSIVLTDHFSSLAPFV
EPVEKLCKPRPSTERLPLKQRVQQYTRSGRRQRINSGPGGNQTGNAGWSG
AGAASRDYSAQGAGDKHVGLHLDVPTDKLKAELKRLVRPDGSLLEPLPLC
GIGVSPGYRGVTKGKGRFSLDADGWAVGGVHNGNKPNVCVSGATIPVTTR
ESPFKVPEYAIVPLRAGKLVIRNQNNAAAPKTMNKKK*
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