prot_C-linearis_contig9.16722.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16722.1
Unique Nameprot_C-linearis_contig9.16722.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length72
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..72
e-value: 8.7E-14
score: 53.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..71
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1..71
e-value: 2.1E-7
score: 31.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..72
score: 16.494
NoneNo IPR availablePANTHERPTHR24171FAMILY NOT NAMEDcoord: 4..71
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 18..50
score: 8.923

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3377636..3378073 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16722.1mRNA_C-linearis_contig9.16722.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3377636..3378092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16722.1 ID=prot_C-linearis_contig9.16722.1|Name=mRNA_C-linearis_contig9.16722.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=72bp
MVNLLLAFGGEKDAKDSFGETPLTKACHLGRKQVCETLMVVGCDVNVRGT
GPYRCTPLDRAAQNRHVAILKS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt