prot_C-linearis_contig9.16719.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16719.1
Unique Nameprot_C-linearis_contig9.16719.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length563
Homology
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BLAST of mRNA_C-linearis_contig9.16719.1 vs. uniprot
Match: D7FMW7_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW7_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 6.270e-20
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 0 
Query:    1 MGKKCTQPGGCPKQALFGVPGSKKREYCAIHALHGMVDIHSKRCGEP 47
            MGKKCT P GCPKQALFGVPGSKKRE+CA+HA+ GMVDIHSKRCGEP
Sbjct:    1 MGKKCTYPAGCPKQALFGVPGSKKREFCALHAIQGMVDIHSKRCGEP 47
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BLAST of mRNA_C-linearis_contig9.16719.1 vs. uniprot
Match: A0A6H5KIN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIN5_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 4.290e-14
Identity = 56/107 (52.34%), Postives = 67/107 (62.62%), Query Frame = 0 
Query:  465 KRELQRVGPIGLEQELLYPWPSATGHQAIVGAGXXXXXXXLMLSPQIPP-----GSQEEEAVVHSLTGLRKKRRKLTTGGVGAVMGASI-GLPT---APSINPSGYM 562
            KRELQRVGPIGLEQELL+PWP  TG    +GAG        + +P I       GS+E+  VVHSLTGLRKKRR L   GV   +G+ + GLPT    PS + +GYM
Sbjct:  382 KRELQRVGPIGLEQELLHPWPPVTGQHQAIGAGGITGGG--VGAPGIGGVADLHGSREDTEVVHSLTGLRKKRRGLN--GVAIPVGSGLAGLPTPPTTPSGSSTGYM 484
[Close]
BLAST of mRNA_C-linearis_contig9.16719.1 vs. uniprot
Match: A0A6H5KGJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ9_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 5.270e-7
Identity = 23/27 (85.19%), Postives = 25/27 (92.59%), Query Frame = 0 
Query:    1 MGKKCTQPGGCPKQALFGVPGSKKREY 27
            MGKKCT P GCPKQALFG+PGSKKRE+
Sbjct:    1 MGKKCTYPAGCPKQALFGMPGSKKREH 27
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FMW7_ECTSI6.270e-2087.23EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KIN5_9PHAE4.290e-1452.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGJ9_9PHAE5.270e-785.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 241..311
NoneNo IPR availablePANTHERPTHR44305FAMILY NOT NAMEDcoord: 227..311
NoneNo IPR availablePANTHERPTHR44305:SF2NIMA RELATED KINASE 3coord: 227..311

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3361947..3364597 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16719.1mRNA_C-linearis_contig9.16719.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3361625..3365078 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16719.1 ID=prot_C-linearis_contig9.16719.1|Name=mRNA_C-linearis_contig9.16719.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=563bp
MGKKCTQPGGCPKQALFGVPGSKKREYCAIHALHGMVDIHSKRCGEPGCN
KWPSYGVLGNKKALFCAPHARPGMLPVNGKRCGHPGCTKQPSFGMPGTKK
REFCALHAVAGMVDVHTKRCARPGCTKHPSFGHVGGKKADFCSLHASGGM
VNVISKSCAFPDCFKQASYGVGGSKRREYCARHAADGMVNVISKRCAHPG
CTKWPSYGVAGGIKREFCAPHAEERTPGTCFGQKQKKKPQKNQMQQQQQQ
QQQQQQQQQQQQQQQQQQQQEQQQQQQQQQLQLQLQLQLQLQQQQQQQQQ
QQQQQQQQQQQLGGARGGSLNSYAYLPPPQQGAGGGTYNPTPQQGVGAGA
YNPVAQQQGAGGGAYNPVTQQVVGGGAYNPIPQQGVAGGNTNAYNAYNPA
PQQQAVTGGGNSSSGGSNYAYNPIPQQGTGVGNSSNYAYNPVPQQHPGGG
GGGGGGGGGGGGSSKRELQRVGPIGLEQELLYPWPSATGHQAIVGAGGGG
GSGGLMLSPQIPPGSQEEEAVVHSLTGLRKKRRKLTTGGVGAVMGASIGL
PTAPSINPSGYM*
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