prot_C-linearis_contig9.16718.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16718.1
Unique Nameprot_C-linearis_contig9.16718.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length249
Homology
BLAST of mRNA_C-linearis_contig9.16718.1 vs. uniprot
Match: D7G8M3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M3_ECTSI)

HSP 1 Score: 390 bits (1003), Expect = 1.020e-135
Identity = 206/241 (85.48%), Postives = 218/241 (90.46%), Query Frame = 0
Query:    1 MSRDSAGDMPLGAATAAGNRNVSEPAFELLFSEIIAYTGAYVSHSAASHATDVLRAAEAGVV-EGEGVEKDGEGEGGDDDAHGALVEPSPASVGAGNQLLPPDQAQRMDARIESMGYEVGYRLVERACQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTTGSRDLVSRLLQLPCGLVRGALANLGLTAAVRASFLDDRGGMSDLPAVSFTIKVR 240
            MSRD+ G++P G+A AAGNR VSEPAFELLFSEIIAYTGAYVSHSAASHATD LRA+EAGV  EGEG EK G       D  G+LVEP+PASVGAG+QLLP DQAQ+M+ARIESMGYEVGYRLVER CQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDT GSRDLV+RLLQLPCGLVRGALANLGL A VRASFLDDRGGMSDLPAVSFTIK+R
Sbjct:    1 MSRDATGEVPAGSAVAAGNRLVSEPAFELLFSEIIAYTGAYVSHSAASHATDRLRASEAGVEDEGEG-EKGGXXXDDGSDTGGSLVEPNPASVGAGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTAGSRDLVNRLLQLPCGLVRGALANLGLVAVVRASFLDDRGGMSDLPAVSFTIKIR 240          
BLAST of mRNA_C-linearis_contig9.16718.1 vs. uniprot
Match: A0A7S2UTW2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTW2_9STRA)

HSP 1 Score: 156 bits (395), Expect = 4.890e-45
Identity = 73/122 (59.84%), Postives = 94/122 (77.05%), Query Frame = 0
Query:  104 AQRMDARIESMGYEVGYRLVERACQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTTGSRDLVSRLLQLPCGLVRGALANLGLTAAV-RASFLDDR 224
            A+ +  R+E MG+EVGYR VER  Q+R +  + LE IKF+CKD W+++FKKQVDKLQTDH+GTFVLKD+ FRW  R+  D     + LV+RLLQ PCG++RGALAN+GL AAV RA F+DD+
Sbjct:   11 AEALAHRLEGMGFEVGYRFVERVAQKRVIPSEPLEIIKFLCKDFWTEVFKKQVDKLQTDHRGTFVLKDAKFRWVLRFVADSDATGKQLVARLLQFPCGILRGALANMGLAAAVVRADFVDDQ 132          
BLAST of mRNA_C-linearis_contig9.16718.1 vs. uniprot
Match: A0A835ZD08_9STRA (Transport protein particle component, Bet3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD08_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.350e-44
Identity = 71/132 (53.79%), Postives = 100/132 (75.76%), Query Frame = 0
Query:  109 ARIESMGYEVGYRLVERACQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTTGSRDLVSRLLQLPCGLVRGALANLGLTAAVRASFLDDRGGMSDLPAVSFTIKVR 240
            AR+ES+G++VG RL ER CQ + + G+ LEA+KF+CKD W+++F+KQ+DKLQTDH+GTFVL++ NF+W ++YA D +   R+L    LQ  CGLVRGA+A L   A V+A F D++   S LPAVSFTI+++
Sbjct:   66 ARLESLGWDVGCRLTERLCQTKLLSGEPLEAVKFICKDFWTEVFRKQIDKLQTDHRGTFVLRELNFKWLAKYAPDKSRTDRNLAWFTLQFACGLVRGAMATLNQPATVKADFWDEKTDRSLLPAVSFTIRLK 197          
BLAST of mRNA_C-linearis_contig9.16718.1 vs. uniprot
Match: F0YPS8_AURAN (Uncharacterized protein n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPS8_AURAN)

HSP 1 Score: 145 bits (365), Expect = 3.950e-40
Identity = 67/140 (47.86%), Postives = 93/140 (66.43%), Query Frame = 0
Query:  101 PDQAQRMDARIESMGYEVGYRLVERACQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTTGSRDLVSRLLQLPCGLVRGALANLGLTAAVRASFLDDRGGMSDLPAVSFTIKVR 240
            P   +   +R E  GYEVGYR VER  Q R +  D LE IKF+CKD+W+++F KQ+DKLQT+H+G FVLKD  FRW +R + DD    + + + +LQ PCG++RGALANLG+ A V A +         LP+ SF+I+++
Sbjct:   20 PQPGETASSRPELHGYEVGYRFVERIAQARALAADHLEVIKFICKDVWNEIFGKQIDKLQTNHRGVFVLKDYTFRWLARVSSDDAEAMKRVTANILQFPCGVLRGALANLGIVATVTAEY-------GTLPSCSFSIRIQ 152          
BLAST of mRNA_C-linearis_contig9.16718.1 vs. uniprot
Match: A0A251TMA2_HELAN (Putative transport protein particle (TRAPP) component n=3 Tax=Asteraceae TaxID=4210 RepID=A0A251TMA2_HELAN)

HSP 1 Score: 135 bits (340), Expect = 2.450e-36
Identity = 67/135 (49.63%), Postives = 94/135 (69.63%), Query Frame = 0
Query:  110 RIESMGYEVGYRLVERACQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDT----TGSRDLVSRLLQLPCGLVRGALANLGLTAAVRASFLDDRGGMSDLPAVSFTIKVR 240
            RIE++GY+VG++L ER    R    D LEAIKF+CKD WS+LFKKQ+D L+T+H+GTFVL+D+ FRW SR + D +    + ++D  S LL  PCG++RGAL+ LG+  AV A        +S+LPA SF I+++
Sbjct:   36 RIEAIGYQVGHQLCERYTMERPRFTDHLEAIKFLCKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLSRVSADPSAETSSAAQDTTSMLLYFPCGIIRGALSTLGIPCAVSAD-------ISNLPACSFVIRIK 163          
BLAST of mRNA_C-linearis_contig9.16718.1 vs. uniprot
Match: A0A1Y1IG54_KLENI (Transport protein particle (TRAPP) component n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IG54_KLENI)

HSP 1 Score: 134 bits (337), Expect = 9.540e-36
Identity = 70/145 (48.28%), Postives = 93/145 (64.14%), Query Frame = 0
Query:  110 RIESMGYEVGYRLVERACQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAED-----------DTTGSRDLVSR--LLQLPCGLVRGALANLGLTAAVRASFLDDRGGMSDLPAVSFTIKVRP 241
            R+E++G++VG +LVERA + R    D LE IKF+CKDLWSD+FKKQVD L+T+H+GTFVL+D+ FRW +R + D           DT  +R        L  PCGL+RGAL NLG+   V A        ++ LPA SFTIK++P
Sbjct:   38 RVEAIGFQVGQQLVERATKERPRFADHLEVIKFICKDLWSDVFKKQVDNLKTNHRGTFVLQDTRFRWLTRLSSDVPPPGTPVSPSDTPAARASAEAGAYLYFPCGLIRGALTNLGIPCTVSAE-------VNQLPACSFTIKIKP 175          
BLAST of mRNA_C-linearis_contig9.16718.1 vs. uniprot
Match: A0A2D4BMC0_PYTIN (Transport protein particle component, Bet3 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMC0_PYTIN)

HSP 1 Score: 134 bits (336), Expect = 1.650e-35
Identity = 65/147 (44.22%), Postives = 95/147 (64.63%), Query Frame = 0
Query:   94 AGNQLLPPDQAQRMDARIESMGYEVGYRLVERACQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTTGSRDLVSRLLQLPCGLVRGALANLGLTAAVRASFLDDRGGMSDLPAVSFTIKVR 240
            +G+  +  ++ + +  R+E+MGY VGYR VER+ + R    + L+ IKFVCKD W  +FKKQ+DKLQT+H+G FV++D +FRW S ++      +RD+    L  PCGL+RGALANLG+TA V A        ++ LP   F IK++
Sbjct:   42 SGDAEVAKNRKEELTMRLEAMGYXVGYRFVERSARDRPRMTEPLDVIKFVCKDFWIMIFKKQIDKLQTNHRGVFVVQDYSFRWLSGFSSSTDQHTRDMALLFLVFPCGLIRGALANLGITAIVNAD-------LTTLPGCLFNIKIK 181          
BLAST of mRNA_C-linearis_contig9.16718.1 vs. uniprot
Match: A0A7N0TFR6_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TFR6_KALFE)

HSP 1 Score: 133 bits (334), Expect = 2.390e-35
Identity = 71/151 (47.02%), Postives = 97/151 (64.24%), Query Frame = 0
Query:  101 PDQAQRMDARIESMGYEVGYRLVERACQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTTGSRDL-----------VSRLLQLPCGLVRGALANLGLTAAVRASFLDDRGGMSDLPAVSFTIKVR 240
            PD A R   RIE++GY+VG++L ER    R   GD LEAIKF+CKD WS+LFKKQ+D L+T+H+GTFVL+D+ FRW +R + + T  S D             S  L  PCG++RGAL+NLG+  AV A        +S+LPA SF ++++
Sbjct:   30 PDLAAR---RIEAIGYQVGHQLSERYTMDRPRFGDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVEPTPESPDASDDPESKASQATSMHLYFPCGIIRGALSNLGIPCAVSAD-------ISNLPACSFVVRIK 170          
BLAST of mRNA_C-linearis_contig9.16718.1 vs. uniprot
Match: B9FWP9_ORYSJ (Os07g0291100 protein n=20 Tax=Oryzeae TaxID=147380 RepID=B9FWP9_ORYSJ)

HSP 1 Score: 132 bits (332), Expect = 5.350e-35
Identity = 66/146 (45.21%), Postives = 94/146 (64.38%), Query Frame = 0
Query:  110 RIESMGYEVGYRLVERACQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTTGSRDLV---------------SRLLQLPCGLVRGALANLGLTAAVRASFLDDRGGMSDLPAVSFTIKVR 240
            RIE++G++VG++L ER    R    D LEAIKF+CKD WS+LFKKQ+D L+T+H+GTFVL+D++FRW +R + D +  S D                 S LL  PCG++RGAL NLG++ +V A        MS+LPA SF ++++
Sbjct:   36 RIEAIGFQVGHQLTERYTMERPRFSDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNHFRWLTRVSVDPSVESMDATENDSTTLGDSAAQTTSMLLYFPCGIIRGALTNLGISCSVTAD-------MSNLPACSFVVRIK 174          
BLAST of mRNA_C-linearis_contig9.16718.1 vs. uniprot
Match: A9PBG7_POPTR (Uncharacterized protein n=6 Tax=Saliceae TaxID=238069 RepID=A9PBG7_POPTR)

HSP 1 Score: 131 bits (330), Expect = 8.950e-35
Identity = 68/140 (48.57%), Postives = 94/140 (67.14%), Query Frame = 0
Query:  110 RIESMGYEVGYRLVERACQRRWMGGDQLEAIKFVCKDLWSDLFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTT--GSRD-------LVSRLLQLPCGLVRGALANLGLTAAVRASFLDDRGGMSDLPAVSFTIKVR 240
            RIE++GY+VG++L ER    R    D LEAIKF+CKD WS+LFKKQ+D L+T+H+GTFVL+D+ FRW SR + D +   G++D        +S  L  PCG++RGAL+NLG+  AV A        +S LPA SF I+++
Sbjct:   36 RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHKGTFVLQDNKFRWLSRMSGDPSVENGTQDPESKAAQAMSMYLYFPCGIIRGALSNLGIPCAVSAD-------ISSLPACSFVIRIK 168          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8M3_ECTSI1.020e-13585.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UTW2_9STRA4.890e-4559.84Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835ZD08_9STRA1.350e-4453.79Transport protein particle component, Bet3 n=1 Tax... [more]
F0YPS8_AURAN3.950e-4047.86Uncharacterized protein n=3 Tax=Aureococcus anopha... [more]
A0A251TMA2_HELAN2.450e-3649.63Putative transport protein particle (TRAPP) compon... [more]
A0A1Y1IG54_KLENI9.540e-3648.28Transport protein particle (TRAPP) component n=1 T... [more]
A0A2D4BMC0_PYTIN1.650e-3544.22Transport protein particle component, Bet3 n=2 Tax... [more]
A0A7N0TFR6_KALFE2.390e-3547.02Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]
B9FWP9_ORYSJ5.350e-3545.21Os07g0291100 protein n=20 Tax=Oryzeae TaxID=147380... [more]
A9PBG7_POPTR8.950e-3548.57Uncharacterized protein n=6 Tax=Saliceae TaxID=238... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007194Transport protein particle (TRAPP) componentPFAMPF04051TRAPPcoord: 27..239
e-value: 5.9E-34
score: 116.9
NoneNo IPR availablePANTHERPTHR12817:SF0TRAFFICKING PROTEIN PARTICLE COMPLEX 6Bcoord: 21..240
IPR037992TRAPP complex, Trs33 subunitPANTHERPTHR12817TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6Bcoord: 21..240
IPR024096NO signalling/Golgi transport ligand-binding domain superfamilySUPERFAMILY111126Ligand-binding domain in the NO signalling and Golgi transportcoord: 21..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3357754..3360753 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16718.1mRNA_C-linearis_contig9.16718.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3357692..3361181 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16718.1 ID=prot_C-linearis_contig9.16718.1|Name=mRNA_C-linearis_contig9.16718.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=249bp
MSRDSAGDMPLGAATAAGNRNVSEPAFELLFSEIIAYTGAYVSHSAASHA
TDVLRAAEAGVVEGEGVEKDGEGEGGDDDAHGALVEPSPASVGAGNQLLP
PDQAQRMDARIESMGYEVGYRLVERACQRRWMGGDQLEAIKFVCKDLWSD
LFKKQVDKLQTDHQGTFVLKDSNFRWTSRYAEDDTTGSRDLVSRLLQLPC
GLVRGALANLGLTAAVRASFLDDRGGMSDLPAVSFTIKVRPSSNSNNQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007194TRAPP_component
IPR037992TRAPPC6/Trs33
IPR024096NO_sig/Golgi_transp_ligand-bd