prot_C-linearis_contig9.16711.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16711.1
Unique Nameprot_C-linearis_contig9.16711.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length75
Homology
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BLAST of mRNA_C-linearis_contig9.16711.1 vs. uniprot
Match: A0A6H5KU44_9PHAE (KAP NTPase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU44_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 1.310e-12
Identity = 33/59 (55.93%), Postives = 45/59 (76.27%), Query Frame = 0 
Query:    1 MVVFLAVDPQLIISAIAESFEGVPNTMKALQYLDKIIHLPFCIPRTSEAQRLNYLNDLL 59
            MVVFLAVDP++I+SAI +  E VP+ +  L YL+KIIH+PFC+P+ S+  + NYL  LL
Sbjct:  144 MVVFLAVDPRIIVSAIDKKLEDVPDEVNGLVYLEKIIHIPFCLPQISKEDQRNYLQGLL 202
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BLAST of mRNA_C-linearis_contig9.16711.1 vs. uniprot
Match: A0A6H5JLB7_9PHAE (KAP NTPase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB7_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 8.390e-6
Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 0 
Query:    1 MVVFLAVDPQLIISAI-AESFEGVPNTMKALQYLDKIIHLPFCIPRTSEAQRLNYLNDLL 59
            +VV LA+DP++IISAI A+    V   +   +YLDKIIH+PFC+P  ++ QRL  ++  L
Sbjct:  466 VVVILALDPRVIISAIEADLGPEVRKEVSGSEYLDKIIHVPFCVPFGTQKQRLTLIDSWL 525
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16711.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU44_9PHAE1.310e-1255.93KAP NTPase domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JLB7_9PHAE8.390e-646.67KAP NTPase domain-containing protein n=1 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011646KAP family P-loop domainPFAMPF07693KAP_NTPasecoord: 2..58
e-value: 1.7E-8
score: 34.1
NoneNo IPR availablePANTHERPTHR22674FAMILY NOT NAMEDcoord: 2..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3234101..3234445 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16711.1mRNA_C-linearis_contig9.16711.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3234101..3234445 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16711.1 ID=prot_C-linearis_contig9.16711.1|Name=mRNA_C-linearis_contig9.16711.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=75bp
MVVFLAVDPQLIISAIAESFEGVPNTMKALQYLDKIIHLPFCIPRTSEAQ
RLNYLNDLLNGDDNSSRKTLRRLQQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011646KAP_P-loop