prot_C-linearis_contig9.16706.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16706.1
Unique Nameprot_C-linearis_contig9.16706.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length535
Homology
BLAST of mRNA_C-linearis_contig9.16706.1 vs. uniprot
Match: A0A6H5JKF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF0_9PHAE)

HSP 1 Score: 486 bits (1252), Expect = 4.950e-164
Identity = 337/583 (57.80%), Postives = 380/583 (65.18%), Query Frame = 0
Query:    1 MADGWDDWGDDDDKSA--------KGSDKSEGWDWPAA---EGGSSAAALGSKQEQQQRDQSPALEENEARDAAVDERTEKYFLELQKYLEDLADPSVREEINQELTKRDFFSLARYYDGRDDLAAYTIDTELRRMTYSIVAEDGRCIGGAADASGSESGQVGDGGGAPGGTAVREFLSGRRDSGMLRMANQSIFADMLEA----IQGRLLRPDLEISVISRDCEFSLDFSKDVLEAHSLFEISTVGNGGPGAPETLEIAQIKGTVCVDTENQVCSQRLLSPQLRMVFDDAMRASASVLALHSLMDGGMSDSGTGPERGKGG------SLDRMESLRTSLARASSDGMGRAAAAGTGLLANVVAGVGSAIGATRSGTE--DEYFAGDGGGSXXXXXXXXXXXXAAPLVQLYRRTDADEPSGRAGAPAAAETTH-------------------TNFSTSF---GSRTNARNSTGVWSERERAEAVLGESNSSKISSLNEFTADTVDTAGEGGGVERRSALGVASATGGAVLRGLWGGVQSAAAAGVTV---TRQGGSGGDGASGGGDAQPRSE--FRLYRREGD 533
            MAD WDDWGDDD + A          SDKSEGWDWP A   +  S A A+    +Q  +D++ A+E  EAR+A V E TEK+F+EL+ YLE+LADPSVREEINQEL K DF S  RYYDGRDDLA YT+DTEL+RM YS+V EDGR +GG  +  G+E G  G G G  GG+ +REFL+GR    MLRMANQSIFADMLEA    IQGRLLRPDLEISVISRDCEF LDFS  VLEAHSLFE+STVG GGPGAPETLEIA IKGT  VD+ +Q C+QRLLSPQLRMVFDDAMR SA VLALHS MD G      G   G GG      SL R+ SLR SLARAS+DGMGRAAAAGTGLLANVVAGVGSAIGA+R+GT   D +  G GG S             APL+QLYRRTD  E  GRA AP AA T                     T    SF   G      + +GV +   R+  + G    +   + +        T GE    ERRSALG+ASATGGAVLRGLWGGVQSAAAAG  V    RQG     GA+ GG A+P S   FRLYRREGD
Sbjct:    1 MADDWDDWGDDDGEVAVADGGDNSNSSDKSEGWDWPVAATTKPPSPAIAI----QQSSQDENAAVE-REAREAVVAEMTEKFFVELRSYLENLADPSVREEINQELNKCDFASFTRYYDGRDDLATYTLDTELQRMRYSVVTEDGRRLGGD-EREGAEPGLEGGGRGXXGGSVLREFLAGRVGDAMLRMANQSIFADMLEARFRAIQGRLLRPDLEISVISRDCEFFLDFSSGVLEAHSLFEVSTVGGGGPGAPETLEIAHIKGTASVDSRSQTCTQRLLSPQLRMVFDDAMRTSARVLALHSFMDRGAGMDEFGAGVGVGGLSSSSSSLRRIGSLRDSLARASTDGMGRAAAAGTGLLANVVAGVGSAIGASRNGTPAGDFFHVGGGGNSEGPKSTITDE---APLLQLYRRTDLAEEEGRA-APVAAATAGATGDAXXXXXXXXVAPDEGTPVINSFYPHGGECTGADGSGVGAGSSRSPPLAGRRVGNGRHASSPAXXXXXXTGGEEA-TERRSALGMASATGGAVLRGLWGGVQSAAAAGAAVGFAARQGA----GAADGGVAEPESPPAFRLYRREGD 568          
BLAST of mRNA_C-linearis_contig9.16706.1 vs. uniprot
Match: W7U7S3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U7S3_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.220e-19
Identity = 84/264 (31.82%), Postives = 122/264 (46.21%), Query Frame = 0
Query:   64 VDERTEKYFL-ELQKYLEDLADPSVREEINQELTKRDFFSLARYYDGRDDLAAYTIDTELRRMTYSIVAEDGRCIGGAADA--------------------SGSESGQVGDGGGAPGGTAVREF------LSGRRDSGMLR-------------MANQSIFADMLEAIQGRLLRPDLEISVISRDCEFSLDFSKDVLEAHSLFEISTVGNGGPGAPETLEIAQIKGTVCVDTENQVCSQRLLSPQLRMVFDDAMRASASVLALH 287
            +DE   K+F  +LQKY++DLADP + +EI  +L K+ +     Y+  +  +A YT+D EL RM+Y +V   G     A D                     S  + G V      P  T   EF      +    D   +R              ANQ +FADMLE IQ R  R DLE+ V+SRD +F +D   D +E  ++F IS  G    G    +E+A+++G + V+ + Q   Q +   +L  VFDD +   AS L  H
Sbjct:   79 LDEARVKFFQGQLQKYIQDLADPYILQEIESDLAKKHYKDFIEYFTDKPHMAQYTLDHELTRMSYKLVRSSG-----APDRHHTYQDDMIVESYQRNSRKDSNYQHGPVDFSVSNP--TEGNEFPVPKLYVLAEDDPASIRAIHAICAQNLTWRFANQILFADMLETIQRRFFRADLEVGVVSRDSKFVVDVDADSVEGTAIFHISLAG----GTDGPVEVARLQGRIKVEVKKQCLVQCVKLMRLLPVFDDTLARVASALVKH 331          
BLAST of mRNA_C-linearis_contig9.16706.1 vs. uniprot
Match: A0A7S3UTS6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTS6_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 8.880e-16
Identity = 53/132 (40.15%), Postives = 74/132 (56.06%), Query Frame = 0
Query:   95 LTKRDFFSLARYYDGRDDLAAYTIDTELRRMTYSIVAEDGRCIGGAADASGSESGQVGDGGGAPGGTAVREFLSGRRDSGMLRMANQSIFADMLEAIQGRLLRPDLEISVISRDCEFSLDFSKDVLEAHSLF 226
            L +R F +L  YY+ R +LA YT+ +E+ RM Y ++    +             GQ  DG        V+E L   + S ++R ANQS+FAD+L AIQ R LRPDL +++ISRD  F LD  K+ +EA S F
Sbjct:    6 LARRPFRALHAYYEERPELADYTVSSEVPRMKYEVIPAKSQ-------------GQEHDGP-ITNTEDVQEVLMLHKWSLVVRYANQSLFADLLSAIQDRFLRPDLNVAIISRDSSFKLDLKKETVEAKSEF 123          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16706.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JKF0_9PHAE4.950e-16457.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7U7S3_9STRA1.220e-1931.82Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S3UTS6_HETAK8.880e-1640.15Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3207873..3211456 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16706.1mRNA_C-linearis_contig9.16706.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3207646..3211465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16706.1 ID=prot_C-linearis_contig9.16706.1|Name=mRNA_C-linearis_contig9.16706.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=535bp
MADGWDDWGDDDDKSAKGSDKSEGWDWPAAEGGSSAAALGSKQEQQQRDQ
SPALEENEARDAAVDERTEKYFLELQKYLEDLADPSVREEINQELTKRDF
FSLARYYDGRDDLAAYTIDTELRRMTYSIVAEDGRCIGGAADASGSESGQ
VGDGGGAPGGTAVREFLSGRRDSGMLRMANQSIFADMLEAIQGRLLRPDL
EISVISRDCEFSLDFSKDVLEAHSLFEISTVGNGGPGAPETLEIAQIKGT
VCVDTENQVCSQRLLSPQLRMVFDDAMRASASVLALHSLMDGGMSDSGTG
PERGKGGSLDRMESLRTSLARASSDGMGRAAAAGTGLLANVVAGVGSAIG
ATRSGTEDEYFAGDGGGSGGIGTGGRGGGGAAPLVQLYRRTDADEPSGRA
GAPAAAETTHTNFSTSFGSRTNARNSTGVWSERERAEAVLGESNSSKISS
LNEFTADTVDTAGEGGGVERRSALGVASATGGAVLRGLWGGVQSAAAAGV
TVTRQGGSGGDGASGGGDAQPRSEFRLYRREGDP*
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